RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 A2ML1A8K2U0 1454 aa12.69□□□□□ -0.38
TRIM39-203ENST00000396547 DISP3Q9P2K9 1392 aa12.68□□□□□ -0.38
TRIM39-203ENST00000396547 APAF1O14727 1248 aa12.68□□□□□ -0.38
TRIM39-203ENST00000396547 FAM43AQ8N2R8 423 aa12.68□□□□□ -0.38
TRIM39-203ENST00000396547 RSPH6AQ9H0K4 717 aa12.68□□□□□ -0.38
TRIM39-203ENST00000396547 RALGAPBQ86X10 1494 aa12.68□□□□□ -0.38
TRIM39-203ENST00000396547 PLEKHH1Q9ULM0 1364 aa12.68□□□□□ -0.38
TRIM39-203ENST00000396547 TMF1P82094 1093 aa12.68□□□□□ -0.38
TRIM39-203ENST00000396547 SPINK5Q9NQ38 1064 aaPredicted RBP12.68□□□□□ -0.38
TRIM39-203ENST00000396547 COG6Q9Y2V7 657 aa12.68□□□□□ -0.38
TRIM39-203ENST00000396547 NAP1L5Q96NT1 182 aaPredicted RBP12.67□□□□□ -0.38
TRIM39-203ENST00000396547 ERVK-7P63135 1459 aa12.67□□□□□ -0.38
TRIM39-203ENST00000396547 PANK1Q8TE04 598 aa12.67□□□□□ -0.38
TRIM39-203ENST00000396547 RRAGDQ9NQL2 400 aaPredicted RBP12.67□□□□□ -0.38
TRIM39-203ENST00000396547 PPP2R1AP30153 589 aa12.66□□□□□ -0.38
TRIM39-203ENST00000396547 UBR1Q8IWV7 1749 aa12.66□□□□□ -0.38
TRIM39-203ENST00000396547 NOS1P29475 1434 aa12.65□□□□□ -0.38
TRIM39-203ENST00000396547 UHRF1BP1Q6BDS2 1440 aa12.65□□□□□ -0.38
TRIM39-203ENST00000396547 BECN1Q14457 450 aa12.65□□□□□ -0.38
TRIM39-203ENST00000396547 PTPRTO14522 1441 aa12.65□□□□□ -0.38
TRIM39-203ENST00000396547 NEURL4Q96JN8 1562 aa12.65□□□□□ -0.38
TRIM39-203ENST00000396547 E9PCH4 1651 aa12.64□□□□□ -0.39
TRIM39-203ENST00000396547 TESK2Q96S53 571 aa12.63□□□□□ -0.39
TRIM39-203ENST00000396547 BCL2L13Q9BXK5 485 aa12.63□□□□□ -0.39
TRIM39-203ENST00000396547 SYNMO15061 1565 aa12.63□□□□□ -0.39
TRIM39-203ENST00000396547 SLIT1O75093 1534 aa12.63□□□□□ -0.39
TRIM39-203ENST00000396547 TNNT2P45379 298 aaPredicted RBP12.63□□□□□ -0.39
TRIM39-203ENST00000396547 CLUAP1Q96AJ1 413 aa12.63□□□□□ -0.39
TRIM39-203ENST00000396547 MED14O60244 1454 aa12.62□□□□□ -0.39
TRIM39-203ENST00000396547 SLFN5Q08AF3 891 aa12.62□□□□□ -0.39
TRIM39-203ENST00000396547 ARHGAP23Q9P227 1491 aa12.62□□□□□ -0.39
TRIM39-203ENST00000396547 DMRT2Q9Y5R5 561 aa12.62□□□□□ -0.39
TRIM39-203ENST00000396547 RRP7AQ9Y3A4 280 aaKnown RBP12.61□□□□□ -0.39
TRIM39-203ENST00000396547 PKNOX2Q96KN3 472 aa12.61□□□□□ -0.39
TRIM39-203ENST00000396547 KANK1Q14678 1352 aa12.61□□□□□ -0.39
TRIM39-203ENST00000396547 PANK2Q9BZ23 570 aa12.61□□□□□ -0.39
TRIM39-203ENST00000396547 UPF2Q9HAU5 1272 aaKnown RBP12.61□□□□□ -0.39
TRIM39-203ENST00000396547 CCDC144AA2RUR9 1427 aa12.6□□□□□ -0.39
TRIM39-203ENST00000396547 IQSEC2Q5JU85 1478 aa12.6□□□□□ -0.39
TRIM39-203ENST00000396547 SPHKAPQ2M3C7 1700 aa12.6□□□□□ -0.39
TRIM39-203ENST00000396547 TNRQ92752 1358 aa12.59□□□□□ -0.39
TRIM39-203ENST00000396547 USP19O94966 1318 aa12.59□□□□□ -0.39
TRIM39-203ENST00000396547 KIF3BO15066 747 aa12.59□□□□□ -0.39
TRIM39-203ENST00000396547 UGGT1Q9NYU2 1555 aa12.59□□□□□ -0.39
TRIM39-203ENST00000396547 BLMP54132 1417 aaPredicted RBP12.59□□□□□ -0.39
TRIM39-203ENST00000396547 L1TD1Q5T7N2 865 aaKnown RBP12.59□□□□□ -0.39
TRIM39-203ENST00000396547 TNNQ9UQP3 1299 aa12.59□□□□□ -0.39
TRIM39-203ENST00000396547 ADGRB3O60242 1522 aa12.58□□□□□ -0.4
TRIM39-203ENST00000396547 GOLGA6L3A6NEY3 463 aa12.58□□□□□ -0.4
TRIM39-203ENST00000396547 PNNQ9H307 717 aaKnown RBP12.58□□□□□ -0.4
TRIM39-203ENST00000396547 VSIG10Q8N0Z9 540 aa12.57□□□□□ -0.4
TRIM39-203ENST00000396547 PODXL2Q9NZ53 605 aa12.57□□□□□ -0.4
TRIM39-203ENST00000396547 XRCC6P12956 609 aaKnown RBP eCLIP12.56□□□□□ -0.4
TRIM39-203ENST00000396547 TMEM131LA2VDJ0 1609 aa12.56□□□□□ -0.4
TRIM39-203ENST00000396547 TBC1D2Q9BYX2 928 aa12.56□□□□□ -0.4
TRIM39-203ENST00000396547 CENPJQ9HC77 1338 aaPredicted RBP12.55□□□□□ -0.4
TRIM39-203ENST00000396547 TRPM2O94759 1503 aa12.55□□□□□ -0.4
TRIM39-203ENST00000396547 PRAG1Q86YV5 1406 aa12.55□□□□□ -0.4
TRIM39-203ENST00000396547 MFAP1P55081 439 aaKnown RBP12.55□□□□□ -0.4
TRIM39-203ENST00000396547 ESF1Q9H501 851 aaKnown RBP12.54□□□□□ -0.4
TRIM39-203ENST00000396547 E9PSI1 815 aa12.53□□□□□ -0.4
TRIM39-203ENST00000396547 AMER1Q5JTC6 1135 aaPredicted RBP12.53□□□□□ -0.4
TRIM39-203ENST00000396547 PDZRN3Q9UPQ7 1066 aa12.53□□□□□ -0.4
TRIM39-203ENST00000396547 PCDHB15Q9Y5E8 787 aa12.53□□□□□ -0.4
TRIM39-203ENST00000396547 ZNF521Q96K83 1311 aa12.52□□□□□ -0.4
TRIM39-203ENST00000396547 IQGAP1P46940 1657 aa12.52□□□□□ -0.4
TRIM39-203ENST00000396547 MAPK8IP3Q9UPT6 1336 aa12.52□□□□□ -0.41
TRIM39-203ENST00000396547 MLECQ14165 292 aa12.52□□□□□ -0.41
TRIM39-203ENST00000396547 GGT6Q6P531 493 aa12.52□□□□□ -0.41
TRIM39-203ENST00000396547 CGNL1Q0VF96 1302 aa12.52□□□□□ -0.41
TRIM39-203ENST00000396547 LTBP4Q8N2S1 1624 aa12.51□□□□□ -0.41
TRIM39-203ENST00000396547 MCM4P33991 863 aa12.51□□□□□ -0.41
TRIM39-203ENST00000396547 FOXD4L1Q9NU39 408 aa12.51□□□□□ -0.41
TRIM39-203ENST00000396547 HSP90AA1P07900 732 aaKnown RBP12.51□□□□□ -0.41
TRIM39-203ENST00000396547 RLBP1P12271 317 aa12.51□□□□□ -0.41
TRIM39-203ENST00000396547 HSP90AA2PQ14568 343 aaPredicted RBP12.51□□□□□ -0.41
TRIM39-203ENST00000396547 GLIPR1L2Q4G1C9 344 aa12.51□□□□□ -0.41
TRIM39-203ENST00000396547 DIP2AQ14689 1571 aa12.5□□□□□ -0.41
TRIM39-203ENST00000396547 TRAK2O60296 914 aa12.5□□□□□ -0.41
TRIM39-203ENST00000396547 ANTXR1Q9H6X2 564 aa12.49□□□□□ -0.41
TRIM39-203ENST00000396547 NWD1Q149M9 1564 aa12.49□□□□□ -0.41
TRIM39-203ENST00000396547 NKTRP30414 1462 aaKnown RBP12.49□□□□□ -0.41
TRIM39-203ENST00000396547 CEBPAP49715 358 aaPredicted RBP12.49□□□□□ -0.41
TRIM39-203ENST00000396547 EIF3AQ14152 1382 aaKnown RBP12.48□□□□□ -0.41
TRIM39-203ENST00000396547 MYO5BQ9ULV0 1848 aa12.48□□□□□ -0.41
TRIM39-203ENST00000396547 IFT172Q9UG01 1749 aa12.48□□□□□ -0.41
TRIM39-203ENST00000396547 TBC1D32Q96NH3 1257 aa12.48□□□□□ -0.41
TRIM39-203ENST00000396547 SLC52A1Q9NWF4 448 aa12.48□□□□□ -0.41
TRIM39-203ENST00000396547 PDE3AQ14432 1141 aa12.48□□□□□ -0.41
TRIM39-203ENST00000396547 SENP3Q9H4L4 574 aaPredicted RBP12.48□□□□□ -0.41
TRIM39-203ENST00000396547 KIF1BO60333 1816 aa12.48□□□□□ -0.41
TRIM39-203ENST00000396547 ZFYVE9O95405 1425 aa12.48□□□□□ -0.41
TRIM39-203ENST00000396547 WWC1Q8IX03 1113 aa12.47□□□□□ -0.41
TRIM39-203ENST00000396547 TRMT2AQ8IZ69 625 aaKnown RBP12.47□□□□□ -0.41
TRIM39-203ENST00000396547 PMFBP1Q8TBY8 1022 aa12.47□□□□□ -0.41
TRIM39-203ENST00000396547 MYH16Q9H6N6 1097 aa12.47□□□□□ -0.41
TRIM39-203ENST00000396547 C22orf23Q9BZE7 217 aa12.46□□□□□ -0.41
TRIM39-203ENST00000396547 CPS1P31327 1500 aa12.46□□□□□ -0.41
TRIM39-203ENST00000396547 CLTCL1P53675 1640 aa12.46□□□□□ -0.41
TRIM39-203ENST00000396547 CDCA8Q53HL2 280 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms