RNA–Protein interactions for RNA: ENST00000396247.7

RDH13-202, Transcript of retinol dehydrogenase 13, humanhuman

TSL 1 (best) BASIC

Gene RDH13, Length 1,987 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-202ENST00000396247 SLC12A5Q9H2X9 1139 aa22.87■■□□□ 1.25
RDH13-202ENST00000396247 RIMS1Q86UR5 1692 aaKnown RBP22.87■■□□□ 1.25
RDH13-202ENST00000396247 PLEKHG1Q9ULL1 1385 aa22.86■■□□□ 1.25
RDH13-202ENST00000396247 LTKP29376 864 aa22.85■■□□□ 1.25
RDH13-202ENST00000396247 TXNDC2Q86VQ3 553 aa22.85■■□□□ 1.25
RDH13-202ENST00000396247 CABP2Q9NPB3 220 aa22.85■■□□□ 1.25
RDH13-202ENST00000396247 EID1Q9Y6B2 187 aa22.85■■□□□ 1.25
RDH13-202ENST00000396247 SLIT1O75093 1534 aa22.85■■□□□ 1.25
RDH13-202ENST00000396247 ARHGAP23Q9P227 1491 aa22.85■■□□□ 1.25
RDH13-202ENST00000396247 THEMISQ8N1K5 641 aaPredicted RBP22.84■■□□□ 1.25
RDH13-202ENST00000396247 SRPK2P78362 688 aaKnown RBP22.83■■□□□ 1.25
RDH13-202ENST00000396247 ADAMTSL3P82987 1691 aa22.83■■□□□ 1.24
RDH13-202ENST00000396247 ADAMTS13Q76LX8 1427 aa22.82■■□□□ 1.24
RDH13-202ENST00000396247 WAPLQ7Z5K2 1190 aa22.81■■□□□ 1.24
RDH13-202ENST00000396247 ATAD2Q6PL18 1390 aa22.81■■□□□ 1.24
RDH13-202ENST00000396247 NINLQ9Y2I6 1382 aa22.81■■□□□ 1.24
RDH13-202ENST00000396247 NSD3Q9BZ95 1437 aa22.8■■□□□ 1.24
RDH13-202ENST00000396247 TECPR2O15040 1411 aa22.8■■□□□ 1.24
RDH13-202ENST00000396247 ZBED9Q6R2W3 1325 aa22.8■■□□□ 1.24
RDH13-202ENST00000396247 PLEKHH1Q9ULM0 1364 aa22.8■■□□□ 1.24
RDH13-202ENST00000396247 PPP2R1AP30153 589 aa22.8■■□□□ 1.24
RDH13-202ENST00000396247 KNDC1Q76NI1 1749 aa22.79■■□□□ 1.24
RDH13-202ENST00000396247 ANKRD36BQ8N2N9 1353 aa22.79■■□□□ 1.24
RDH13-202ENST00000396247 SIRT1Q96EB6 747 aa22.79■■□□□ 1.24
RDH13-202ENST00000396247 CDK19Q9BWU1 502 aa22.78■■□□□ 1.24
RDH13-202ENST00000396247 FAM135BQ49AJ0 1406 aa22.78■■□□□ 1.24
RDH13-202ENST00000396247 CEP170BQ9Y4F5 1589 aaPredicted RBP22.77■■□□□ 1.24
RDH13-202ENST00000396247 MED14O60244 1454 aa22.76■■□□□ 1.23
RDH13-202ENST00000396247 CPS1P31327 1500 aa22.76■■□□□ 1.23
RDH13-202ENST00000396247 USP32Q8NFA0 1604 aa22.74■■□□□ 1.23
RDH13-202ENST00000396247 SLC26A8Q96RN1 970 aa22.72■■□□□ 1.23
RDH13-202ENST00000396247 CGNL1Q0VF96 1302 aa22.72■■□□□ 1.23
RDH13-202ENST00000396247 TBX22Q9Y458 520 aa22.71■■□□□ 1.23
RDH13-202ENST00000396247 A0A1W2PP64 1363 aa22.71■■□□□ 1.23
RDH13-202ENST00000396247 TERF2IPQ9NYB0 399 aa22.7■■□□□ 1.23
RDH13-202ENST00000396247 ROBO2Q9HCK4 1378 aa22.69■■□□□ 1.22
RDH13-202ENST00000396247 TSHZ2Q9NRE2 1034 aa22.69■■□□□ 1.22
RDH13-202ENST00000396247 WASLO00401 505 aaPredicted RBP22.69■■□□□ 1.22
RDH13-202ENST00000396247 INSRP06213 1382 aa22.68■■□□□ 1.22
RDH13-202ENST00000396247 DIP2AQ14689 1571 aa22.68■■□□□ 1.22
RDH13-202ENST00000396247 MORC1Q86VD1 984 aa22.68■■□□□ 1.22
RDH13-202ENST00000396247 ZNF142P52746 1687 aaPredicted RBP22.68■■□□□ 1.22
RDH13-202ENST00000396247 NSD2O96028 1365 aa22.68■■□□□ 1.22
RDH13-202ENST00000396247 CD163L1Q9NR16 1453 aa22.67■■□□□ 1.22
RDH13-202ENST00000396247 PTPRUQ92729 1446 aa22.67■■□□□ 1.22
RDH13-202ENST00000396247 SETD1BQ9UPS6 1966 aaKnown RBP22.66■■□□□ 1.22
RDH13-202ENST00000396247 CABP1Q9NZU7 370 aa22.66■■□□□ 1.22
RDH13-202ENST00000396247 HDGFL2Q7Z4V5 671 aaPredicted RBP22.65■■□□□ 1.22
RDH13-202ENST00000396247 AMOTL2Q9Y2J4 779 aa22.63■■□□□ 1.21
RDH13-202ENST00000396247 WDR43Q15061 677 aaKnown RBP eCLIP22.63■■□□□ 1.21
RDH13-202ENST00000396247 BLMP54132 1417 aaPredicted RBP22.63■■□□□ 1.21
RDH13-202ENST00000396247 NEFLP07196 543 aa22.62■■□□□ 1.21
RDH13-202ENST00000396247 ANKLE2Q86XL3 938 aa22.62■■□□□ 1.21
RDH13-202ENST00000396247 ATP7BP35670 1465 aa22.62■■□□□ 1.21
RDH13-202ENST00000396247 ADAMTS8Q9UP79 889 aa22.6■■□□□ 1.21
RDH13-202ENST00000396247 ADGRB2O60241 1585 aa22.6■■□□□ 1.21
RDH13-202ENST00000396247 PTCH1Q13635 1447 aa22.6■■□□□ 1.21
RDH13-202ENST00000396247 SENP3-EIF4A1A0A087X0R7 540 aa22.59■■□□□ 1.21
RDH13-202ENST00000396247 FKBP8Q14318 412 aa22.59■■□□□ 1.21
RDH13-202ENST00000396247 NUDT16Q96DE0 195 aaKnown RBP22.59■■□□□ 1.21
RDH13-202ENST00000396247 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.59■■□□□ 1.21
RDH13-202ENST00000396247 TNNT2P45379 298 aaPredicted RBP22.59■■□□□ 1.21
RDH13-202ENST00000396247 PPIP5K1Q6PFW1 1433 aa22.58■■□□□ 1.21
RDH13-202ENST00000396247 POLR3AO14802 1390 aaPredicted RBP22.58■■□□□ 1.21
RDH13-202ENST00000396247 PIK3R4Q99570 1358 aa22.57■■□□□ 1.2
RDH13-202ENST00000396247 CCDC61Q9Y6R9 512 aa22.57■■□□□ 1.2
RDH13-202ENST00000396247 XRN1Q8IZH2 1706 aaKnown RBP22.55■■□□□ 1.2
RDH13-202ENST00000396247 FYB1O15117 783 aa22.55■■□□□ 1.2
RDH13-202ENST00000396247 SMG6Q86US8 1419 aaKnown RBP22.54■■□□□ 1.2
RDH13-202ENST00000396247 GGNBP2Q9H3C7 697 aa22.54■■□□□ 1.2
RDH13-202ENST00000396247 CPSF1Q10570 1443 aaKnown RBP22.54■■□□□ 1.2
RDH13-202ENST00000396247 PRR36Q9H6K5 1346 aa22.53■■□□□ 1.2
RDH13-202ENST00000396247 ANKRD26Q9UPS8 1709 aa22.52■■□□□ 1.2
RDH13-202ENST00000396247 CDC42BPGQ6DT37 1551 aa22.52■■□□□ 1.2
RDH13-202ENST00000396247 NCKAP5LQ9HCH0 1330 aa22.51■■□□□ 1.19
RDH13-202ENST00000396247 MTHFSP49914 203 aa22.51■■□□□ 1.19
RDH13-202ENST00000396247 NUDCQ9Y266 331 aa22.51■■□□□ 1.19
RDH13-202ENST00000396247 SALL2Q9Y467 1007 aaPredicted RBP22.5■■□□□ 1.19
RDH13-202ENST00000396247 KCNA6P17658 529 aa22.5■■□□□ 1.19
RDH13-202ENST00000396247 EDC4Q6P2E9 1401 aaKnown RBP22.5■■□□□ 1.19
RDH13-202ENST00000396247 KIF20BQ96Q89 1820 aa22.5■■□□□ 1.19
RDH13-202ENST00000396247 CFAP53Q96M91 514 aa22.49■■□□□ 1.19
RDH13-202ENST00000396247 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.49■■□□□ 1.19
RDH13-202ENST00000396247 PDE3BQ13370 1112 aa22.47■■□□□ 1.19
RDH13-202ENST00000396247 ZNF692Q9BU19 519 aaPredicted RBP22.47■■□□□ 1.19
RDH13-202ENST00000396247 NPHP4O75161 1426 aaPredicted RBP22.46■■□□□ 1.19
RDH13-202ENST00000396247 TOPAZ1Q8N9V7 1692 aa22.46■■□□□ 1.19
RDH13-202ENST00000396247 ITSN1Q15811 1721 aa22.45■■□□□ 1.18
RDH13-202ENST00000396247 MON2Q7Z3U7 1717 aa22.45■■□□□ 1.18
RDH13-202ENST00000396247 SHPRHQ149N8 1683 aa22.45■■□□□ 1.18
RDH13-202ENST00000396247 AKAP12Q02952 1782 aa22.44■■□□□ 1.18
RDH13-202ENST00000396247 CHD2O14647 1828 aaKnown RBP22.44■■□□□ 1.18
RDH13-202ENST00000396247 PLEKHG3A1L390 1219 aa22.44■■□□□ 1.18
RDH13-202ENST00000396247 NUTM2FA1L443 756 aa22.44■■□□□ 1.18
RDH13-202ENST00000396247 CCDC146Q8IYE0 955 aa22.42■■□□□ 1.18
RDH13-202ENST00000396247 ACEP12821 1306 aa22.41■■□□□ 1.18
RDH13-202ENST00000396247 ANP32EQ9BTT0 268 aa22.4■■□□□ 1.18
RDH13-202ENST00000396247 NME9Q86XW9 330 aa22.39■■□□□ 1.18
RDH13-202ENST00000396247 NKTRP30414 1462 aaKnown RBP22.39■■□□□ 1.18
RDH13-202ENST00000396247 APAF1O14727 1248 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms