RNA–Protein interactions for RNA: ENST00000395840.6

RAE1-202, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-202ENST00000395840 ALKQ9UM73 1620 aa12.1□□□□□ -0.47
RAE1-202ENST00000395840 NRXN3Q9Y4C0 1643 aa12.1□□□□□ -0.47
RAE1-202ENST00000395840 NKTRP30414 1462 aaKnown RBP12.1□□□□□ -0.47
RAE1-202ENST00000395840 ADGRF5Q8IZF2 1346 aa12.09□□□□□ -0.47
RAE1-202ENST00000395840 NWD1Q149M9 1564 aa12.09□□□□□ -0.47
RAE1-202ENST00000395840 C14orf93Q9H972 538 aaKnown RBP12.09□□□□□ -0.47
RAE1-202ENST00000395840 GSE1Q14687 1217 aa12.08□□□□□ -0.48
RAE1-202ENST00000395840 NCOA3Q9Y6Q9 1424 aa12.08□□□□□ -0.48
RAE1-202ENST00000395840 KIAA1210Q9ULL0 1709 aa12.08□□□□□ -0.48
RAE1-202ENST00000395840 CHD2O14647 1828 aaKnown RBP12.08□□□□□ -0.48
RAE1-202ENST00000395840 L3MBTL2Q969R5 705 aa12.07□□□□□ -0.48
RAE1-202ENST00000395840 KDM2AQ9Y2K7 1162 aa12.07□□□□□ -0.48
RAE1-202ENST00000395840 LTBP4Q8N2S1 1624 aa12.07□□□□□ -0.48
RAE1-202ENST00000395840 PRAG1Q86YV5 1406 aa12.07□□□□□ -0.48
RAE1-202ENST00000395840 ZNF335Q9H4Z2 1342 aaPredicted RBP12.06□□□□□ -0.48
RAE1-202ENST00000395840 SETD1AO15047 1707 aaKnown RBP12.06□□□□□ -0.48
RAE1-202ENST00000395840 NPM2Q86SE8 214 aaKnown RBP12.05□□□□□ -0.48
RAE1-202ENST00000395840 SIRT1Q96EB6 747 aa12.05□□□□□ -0.48
RAE1-202ENST00000395840 AMOTL2Q9Y2J4 779 aa12.05□□□□□ -0.48
RAE1-202ENST00000395840 PPM1GO15355 546 aaPredicted RBP12.04□□□□□ -0.48
RAE1-202ENST00000395840 CERKQ8TCT0 537 aa12.04□□□□□ -0.48
RAE1-202ENST00000395840 METP08581 1390 aa12.04□□□□□ -0.48
RAE1-202ENST00000395840 LRPPRCP42704 1394 aaKnown RBP12.04□□□□□ -0.48
RAE1-202ENST00000395840 XRN1Q8IZH2 1706 aaKnown RBP12.03□□□□□ -0.48
RAE1-202ENST00000395840 PTCH1Q13635 1447 aa12.03□□□□□ -0.48
RAE1-202ENST00000395840 PROSER2Q86WR7 435 aaPredicted RBP12.03□□□□□ -0.48
RAE1-202ENST00000395840 FAM43AQ8N2R8 423 aa12.03□□□□□ -0.48
RAE1-202ENST00000395840 ABCC11Q96J66 1382 aa12.03□□□□□ -0.48
RAE1-202ENST00000395840 TECPR2O15040 1411 aa12.03□□□□□ -0.48
RAE1-202ENST00000395840 CFAP70Q5T0N1 1121 aa12.02□□□□□ -0.49
RAE1-202ENST00000395840 KNDC1Q76NI1 1749 aa12.02□□□□□ -0.49
RAE1-202ENST00000395840 LRRC7Q96NW7 1537 aa12.02□□□□□ -0.49
RAE1-202ENST00000395840 YTHDC2Q9H6S0 1430 aaKnown RBP12.01□□□□□ -0.49
RAE1-202ENST00000395840 DLC1Q96QB1 1528 aa12.01□□□□□ -0.49
RAE1-202ENST00000395840 FAM135BQ49AJ0 1406 aa12.01□□□□□ -0.49
RAE1-202ENST00000395840 PTPRUQ92729 1446 aa12.01□□□□□ -0.49
RAE1-202ENST00000395840 FRAT1Q92837 279 aaPredicted RBP12.01□□□□□ -0.49
RAE1-202ENST00000395840 STRCP1A6NGW2 1772 aa12.01□□□□□ -0.49
RAE1-202ENST00000395840 SENP3Q9H4L4 574 aaPredicted RBP12□□□□□ -0.49
RAE1-202ENST00000395840 ADGRB1O14514 1584 aa11.99□□□□□ -0.49
RAE1-202ENST00000395840 MSH6P52701 1360 aa11.98□□□□□ -0.49
RAE1-202ENST00000395840 TMEM94Q12767 1356 aa11.98□□□□□ -0.49
RAE1-202ENST00000395840 TRPM1Q7Z4N2 1603 aa11.98□□□□□ -0.49
RAE1-202ENST00000395840 ASXL1Q8IXJ9 1541 aa11.98□□□□□ -0.49
RAE1-202ENST00000395840 DCCP43146 1447 aa11.97□□□□□ -0.49
RAE1-202ENST00000395840 TMEM132EQ6IEE7 984 aa11.97□□□□□ -0.49
RAE1-202ENST00000395840 C14orf37Q86TY3 774 aa11.97□□□□□ -0.49
RAE1-202ENST00000395840 ROCK2O75116 1388 aaKnown RBP11.97□□□□□ -0.49
RAE1-202ENST00000395840 EIF3AQ14152 1382 aaKnown RBP11.97□□□□□ -0.49
RAE1-202ENST00000395840 RALGAPBQ86X10 1494 aa11.97□□□□□ -0.49
RAE1-202ENST00000395840 TOM1O60784 492 aa11.97□□□□□ -0.49
RAE1-202ENST00000395840 C19orf44Q9H6X5 657 aa11.97□□□□□ -0.49
RAE1-202ENST00000395840 STK26Q9P289 416 aa11.96□□□□□ -0.49
RAE1-202ENST00000395840 GPRASP1Q5JY77 1395 aa11.96□□□□□ -0.49
RAE1-202ENST00000395840 POGKQ9P215 609 aa11.95□□□□□ -0.5
RAE1-202ENST00000395840 ROBO2Q9HCK4 1378 aa11.95□□□□□ -0.5
RAE1-202ENST00000395840 CADPS2Q86UW7 1296 aa11.95□□□□□ -0.5
RAE1-202ENST00000395840 ADGRL3Q9HAR2 1447 aa11.95□□□□□ -0.5
RAE1-202ENST00000395840 ATF3P18847 181 aa11.94□□□□□ -0.5
RAE1-202ENST00000395840 HSP90AA2PQ14568 343 aaPredicted RBP11.94□□□□□ -0.5
RAE1-202ENST00000395840 NFKBIBQ15653 356 aa11.94□□□□□ -0.5
RAE1-202ENST00000395840 XIRP1Q702N8 1843 aaKnown RBP11.93□□□□□ -0.5
RAE1-202ENST00000395840 NBPF8Q3BBV2 869 aa11.93□□□□□ -0.5
RAE1-202ENST00000395840 CARD11Q9BXL7 1154 aa11.92□□□□□ -0.5
RAE1-202ENST00000395840 TRAK1Q9UPV9 953 aa11.92□□□□□ -0.5
RAE1-202ENST00000395840 A0A0U1RQG5 324 aaPredicted RBP11.92□□□□□ -0.5
RAE1-202ENST00000395840 NBPF1Q3BBV0 1214 aa11.92□□□□□ -0.5
RAE1-202ENST00000395840 PRAM1Q96QH2 718 aa11.92□□□□□ -0.5
RAE1-202ENST00000395840 FBXO41Q8TF61 875 aa11.91□□□□□ -0.5
RAE1-202ENST00000395840 UBAP1LF5GYI3 381 aa11.91□□□□□ -0.5
RAE1-202ENST00000395840 ARHGEF28Q8N1W1 1705 aaKnown RBP11.91□□□□□ -0.5
RAE1-202ENST00000395840 CDC42BPGQ6DT37 1551 aa11.91□□□□□ -0.5
RAE1-202ENST00000395840 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.9□□□□□ -0.5
RAE1-202ENST00000395840 ZBED9Q6R2W3 1325 aa11.9□□□□□ -0.5
RAE1-202ENST00000395840 CCDC184Q52MB2 194 aa11.9□□□□□ -0.5
RAE1-202ENST00000395840 FAM9BQ8IZU0 186 aa11.9□□□□□ -0.5
RAE1-202ENST00000395840 CENPJQ9HC77 1338 aaPredicted RBP11.9□□□□□ -0.5
RAE1-202ENST00000395840 RRP9O43818 475 aaKnown RBP11.9□□□□□ -0.51
RAE1-202ENST00000395840 ADGRB2O60241 1585 aa11.89□□□□□ -0.51
RAE1-202ENST00000395840 WAPLQ7Z5K2 1190 aa11.89□□□□□ -0.51
RAE1-202ENST00000395840 NALCNQ8IZF0 1738 aa11.89□□□□□ -0.51
RAE1-202ENST00000395840 RRAGDQ9NQL2 400 aaPredicted RBP11.89□□□□□ -0.51
RAE1-202ENST00000395840 PDE4AP27815 886 aa11.88□□□□□ -0.51
RAE1-202ENST00000395840 SLAIN2Q9P270 581 aa11.88□□□□□ -0.51
RAE1-202ENST00000395840 SBNO2Q9Y2G9 1366 aa11.87□□□□□ -0.51
RAE1-202ENST00000395840 RBM10P98175 930 aaKnown RBP11.87□□□□□ -0.51
RAE1-202ENST00000395840 PLEKHH1Q9ULM0 1364 aa11.86□□□□□ -0.51
RAE1-202ENST00000395840 HSP90AA1P07900 732 aaKnown RBP11.86□□□□□ -0.51
RAE1-202ENST00000395840 RBM33Q96EV2 1170 aaKnown RBP11.86□□□□□ -0.51
RAE1-202ENST00000395840 NAP1L5Q96NT1 182 aaPredicted RBP11.86□□□□□ -0.51
RAE1-202ENST00000395840 ANKARQ7Z5J8 1434 aa11.86□□□□□ -0.51
RAE1-202ENST00000395840 QRICH2Q9H0J4 1663 aa11.85□□□□□ -0.51
RAE1-202ENST00000395840 WASLO00401 505 aaPredicted RBP11.85□□□□□ -0.51
RAE1-202ENST00000395840 BACH2Q9BYV9 841 aa11.85□□□□□ -0.51
RAE1-202ENST00000395840 FMN2Q9NZ56 1722 aa11.84□□□□□ -0.51
RAE1-202ENST00000395840 EVC2Q86UK5 1308 aa11.84□□□□□ -0.51
RAE1-202ENST00000395840 MST1RQ04912 1400 aa11.84□□□□□ -0.51
RAE1-202ENST00000395840 TCERG1O14776 1098 aaKnown RBP11.84□□□□□ -0.51
RAE1-202ENST00000395840 PUS7Q96PZ0 661 aaKnown RBP11.84□□□□□ -0.51
RAE1-202ENST00000395840 USP47Q96K76 1375 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms