RNA–Protein interactions for RNA: ENST00000395713.6

TRPS1-202, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 3

Gene TRPS1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-202ENST00000395713 BANK1Q8NDB2 785 aa9.29□□□□□ -0.92
TRPS1-202ENST00000395713 PRR14Q9BWN1 585 aa9.29□□□□□ -0.92
TRPS1-202ENST00000395713 SNRKQ9NRH2 765 aa9.29□□□□□ -0.92
TRPS1-202ENST00000395713 C6orf229H3BNL8 230 aa9.28□□□□□ -0.92
TRPS1-202ENST00000395713 MTMR2Q13614 643 aa9.28□□□□□ -0.92
TRPS1-202ENST00000395713 SYMPKQ92797 1274 aaKnown RBP9.28□□□□□ -0.92
TRPS1-202ENST00000395713 WBP1LQ9NX94 342 aa9.28□□□□□ -0.92
TRPS1-202ENST00000395713 SUPT5HO00267 1087 aaKnown RBP9.27□□□□□ -0.93
TRPS1-202ENST00000395713 AP1G2O75843 785 aa9.27□□□□□ -0.93
TRPS1-202ENST00000395713 UBTFP17480 764 aaKnown RBP9.27□□□□□ -0.93
TRPS1-202ENST00000395713 KCTD12Q96CX2 325 aaKnown RBP9.27□□□□□ -0.93
TRPS1-202ENST00000395713 SLC27A5Q9Y2P5 690 aa9.27□□□□□ -0.93
TRPS1-202ENST00000395713 SPDYE5A6NIY4 337 aa9.26□□□□□ -0.93
TRPS1-202ENST00000395713 THSD4Q6ZMP0 1018 aa9.26□□□□□ -0.93
TRPS1-202ENST00000395713 CLUAP1Q96AJ1 413 aa9.26□□□□□ -0.93
TRPS1-202ENST00000395713 PCDHB3Q9Y5E6 796 aa9.24□□□□□ -0.93
TRPS1-202ENST00000395713 CFAP99D6REC4 459 aa9.23□□□□□ -0.93
TRPS1-202ENST00000395713 USP17L8P0C7I0 530 aa9.23□□□□□ -0.93
TRPS1-202ENST00000395713 TSC1Q92574 1164 aa9.23□□□□□ -0.93
TRPS1-202ENST00000395713 CTDSPL2Q05D32 466 aa9.22□□□□□ -0.93
TRPS1-202ENST00000395713 Q3C1V9 767 aa9.22□□□□□ -0.93
TRPS1-202ENST00000395713 BLOC1S3Q6QNY0 202 aa9.22□□□□□ -0.93
TRPS1-202ENST00000395713 RNF19BQ6ZMZ0 732 aa9.22□□□□□ -0.93
TRPS1-202ENST00000395713 SCUBE3Q8IX30 993 aa9.22□□□□□ -0.93
TRPS1-202ENST00000395713 MTMR14Q8NCE2 650 aa9.22□□□□□ -0.93
TRPS1-202ENST00000395713 PRR7Q8TB68 274 aa9.22□□□□□ -0.93
TRPS1-202ENST00000395713 POM121Q96HA1 1249 aa9.22□□□□□ -0.93
TRPS1-202ENST00000395713 A6NJR5 290 aa9.2□□□□□ -0.94
TRPS1-202ENST00000395713 NR1I2O75469 434 aa9.2□□□□□ -0.94
TRPS1-202ENST00000395713 PTPN5P54829 565 aa9.2□□□□□ -0.94
TRPS1-202ENST00000395713 RETREG3Q86VR2 466 aa9.2□□□□□ -0.94
TRPS1-202ENST00000395713 SPNS2Q8IVW8 549 aa9.2□□□□□ -0.94
TRPS1-202ENST00000395713 HELBQ8NG08 1087 aaPredicted RBP9.2□□□□□ -0.94
TRPS1-202ENST00000395713 RAD21O60216 631 aa9.19□□□□□ -0.94
TRPS1-202ENST00000395713 MMRN1Q13201 1228 aa9.19□□□□□ -0.94
TRPS1-202ENST00000395713 BRICD5Q6PL45 260 aa9.19□□□□□ -0.94
TRPS1-202ENST00000395713 COG6Q9Y2V7 657 aa9.19□□□□□ -0.94
TRPS1-202ENST00000395713 COPS2P61201 443 aa9.18□□□□□ -0.94
TRPS1-202ENST00000395713 THAP11Q96EK4 314 aa9.18□□□□□ -0.94
TRPS1-202ENST00000395713 NISCHQ9Y2I1 1504 aa9.18□□□□□ -0.94
TRPS1-202ENST00000395713 SALL2Q9Y467 1007 aaPredicted RBP9.18□□□□□ -0.94
TRPS1-202ENST00000395713 FMNL1O95466 1100 aaPredicted RBP9.17□□□□□ -0.94
TRPS1-202ENST00000395713 LRRN4Q8WUT4 740 aa9.17□□□□□ -0.94
TRPS1-202ENST00000395713 USB1Q9BQ65 265 aaKnown RBP9.17□□□□□ -0.94
TRPS1-202ENST00000395713 HMX1Q9NP08 348 aaPredicted RBP9.17□□□□□ -0.94
TRPS1-202ENST00000395713 NYAP1Q6ZVC0 841 aa9.16□□□□□ -0.94
TRPS1-202ENST00000395713 GDPD2Q9HCC8 539 aa9.16□□□□□ -0.94
TRPS1-202ENST00000395713 MYT1LQ9UL68 1186 aa9.16□□□□□ -0.94
TRPS1-202ENST00000395713 SOCS7O14512 581 aa9.15□□□□□ -0.94
TRPS1-202ENST00000395713 PER1O15534 1290 aaPredicted RBP9.15□□□□□ -0.94
TRPS1-202ENST00000395713 TRAK2O60296 914 aa9.15□□□□□ -0.94
TRPS1-202ENST00000395713 PROSER2Q86WR7 435 aaPredicted RBP9.15□□□□□ -0.94
TRPS1-202ENST00000395713 GJD4Q96KN9 370 aaPredicted RBP9.15□□□□□ -0.94
TRPS1-202ENST00000395713 APBB1O00213 710 aa9.14□□□□□ -0.95
TRPS1-202ENST00000395713 DESI1Q6ICB0 168 aa9.14□□□□□ -0.95
TRPS1-202ENST00000395713 ARID3CA6NKF2 412 aa9.13□□□□□ -0.95
TRPS1-202ENST00000395713 FNBP4Q8N3X1 1017 aaPredicted RBP9.13□□□□□ -0.95
TRPS1-202ENST00000395713 MTRQ99707 1265 aa9.13□□□□□ -0.95
TRPS1-202ENST00000395713 TBC1D2BQ9UPU7 963 aa9.13□□□□□ -0.95
TRPS1-202ENST00000395713 ABL2P42684 1182 aa9.12□□□□□ -0.95
TRPS1-202ENST00000395713 LYPD8Q6UX82 237 aa9.12□□□□□ -0.95
TRPS1-202ENST00000395713 SPSB2Q99619 263 aa9.12□□□□□ -0.95
TRPS1-202ENST00000395713 TRIM34Q9BYJ4 488 aa9.12□□□□□ -0.95
TRPS1-202ENST00000395713 PRM3Q9NNZ6 103 aa9.12□□□□□ -0.95
TRPS1-202ENST00000395713 TLL1O43897 1013 aa9.11□□□□□ -0.95
TRPS1-202ENST00000395713 ZPR1O75312 459 aa9.11□□□□□ -0.95
TRPS1-202ENST00000395713 FAM160A2Q8N612 972 aaPredicted RBP9.11□□□□□ -0.95
TRPS1-202ENST00000395713 EPS8L1Q8TE68 723 aa9.11□□□□□ -0.95
TRPS1-202ENST00000395713 JUNDP17535 347 aa9.1□□□□□ -0.95
TRPS1-202ENST00000395713 NR6A1Q15406 480 aa9.1□□□□□ -0.95
TRPS1-202ENST00000395713 TJAP1Q5JTD0 557 aa9.1□□□□□ -0.95
TRPS1-202ENST00000395713 ZNF516Q92618 1163 aa9.1□□□□□ -0.95
TRPS1-202ENST00000395713 C1orf115Q9H7X2 142 aa9.1□□□□□ -0.95
TRPS1-202ENST00000395713 NDUFB9Q9Y6M9 179 aa9.1□□□□□ -0.95
TRPS1-202ENST00000395713 MSS51Q4VC12 460 aa9.09□□□□□ -0.95
TRPS1-202ENST00000395713 ZNF777Q9ULD5 760 aaPredicted RBP9.09□□□□□ -0.95
TRPS1-202ENST00000395713 IL21Q9HBE4 155 aa9.08□□□□□ -0.96
TRPS1-202ENST00000395713 PRDM9Q9NQV7 894 aa9.08□□□□□ -0.96
TRPS1-202ENST00000395713 ADH1BP00325 375 aa9.07□□□□□ -0.96
TRPS1-202ENST00000395713 ZNF330Q9Y3S2 320 aaPredicted RBP9.07□□□□□ -0.96
TRPS1-202ENST00000395713 RNF166Q96A37 237 aaPredicted RBP9.06□□□□□ -0.96
TRPS1-202ENST00000395713 GPR37L1O60883 481 aa9.05□□□□□ -0.96
TRPS1-202ENST00000395713 DXOO77932 396 aaKnown RBP9.05□□□□□ -0.96
TRPS1-202ENST00000395713 MMP16P51512 607 aa9.05□□□□□ -0.96
TRPS1-202ENST00000395713 IRF5Q13568 498 aa9.05□□□□□ -0.96
TRPS1-202ENST00000395713 PTPRNQ16849 979 aa9.05□□□□□ -0.96
TRPS1-202ENST00000395713 WWC1Q8IX03 1113 aa9.05□□□□□ -0.96
TRPS1-202ENST00000395713 F12P00748 615 aaPredicted RBP9.04□□□□□ -0.96
TRPS1-202ENST00000395713 NKX2-3Q8TAU0 364 aa9.04□□□□□ -0.96
TRPS1-202ENST00000395713 MAP10Q9P2G4 905 aa9.04□□□□□ -0.96
TRPS1-202ENST00000395713 ARID3AQ99856 593 aa9.03□□□□□ -0.96
TRPS1-202ENST00000395713 NUDT12Q9BQG2 462 aa9.03□□□□□ -0.96
TRPS1-202ENST00000395713 SLC6A16Q9GZN6 736 aa9.03□□□□□ -0.96
TRPS1-202ENST00000395713 HCSTQ9UBK5 93 aa9.03□□□□□ -0.96
TRPS1-202ENST00000395713 CCNYL3P0C7X3 344 aa9.02□□□□□ -0.97
TRPS1-202ENST00000395713 CTHP32929 405 aa9.02□□□□□ -0.97
TRPS1-202ENST00000395713 POM121CA8CG34 1229 aa9.01□□□□□ -0.97
TRPS1-202ENST00000395713 EVA1BQ9NVM1 165 aa9.01□□□□□ -0.97
TRPS1-202ENST00000395713 VAC14Q08AM6 782 aa9□□□□□ -0.97
TRPS1-202ENST00000395713 KCNH2Q12809 1159 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms