RNA–Protein interactions for RNA: ENST00000395522.6

SPECC1-202, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene SPECC1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-202ENST00000395522 LAMC1P11047 1609 aa18.56■□□□□ 0.56
SPECC1-202ENST00000395522 RRAGDQ9NQL2 400 aaPredicted RBP18.55■□□□□ 0.56
SPECC1-202ENST00000395522 MYOM1P52179 1685 aa18.55■□□□□ 0.56
SPECC1-202ENST00000395522 TBC1D32Q96NH3 1257 aa18.54■□□□□ 0.56
SPECC1-202ENST00000395522 NOS1P29475 1434 aa18.54■□□□□ 0.56
SPECC1-202ENST00000395522 IQGAP1P46940 1657 aa18.54■□□□□ 0.56
SPECC1-202ENST00000395522 RWDD1Q9H446 243 aaPredicted RBP18.54■□□□□ 0.56
SPECC1-202ENST00000395522 ELL2O00472 640 aaPredicted RBP18.53■□□□□ 0.56
SPECC1-202ENST00000395522 DZIP1LQ8IYY4 767 aaKnown RBP18.52■□□□□ 0.56
SPECC1-202ENST00000395522 LNPKQ9C0E8 428 aa18.52■□□□□ 0.56
SPECC1-202ENST00000395522 CFAP53Q96M91 514 aa18.52■□□□□ 0.56
SPECC1-202ENST00000395522 C1orf115Q9H7X2 142 aa18.52■□□□□ 0.56
SPECC1-202ENST00000395522 PLXNC1O60486 1568 aa18.52■□□□□ 0.55
SPECC1-202ENST00000395522 C22orf23Q9BZE7 217 aa18.51■□□□□ 0.55
SPECC1-202ENST00000395522 ANTXR1Q9H6X2 564 aa18.51■□□□□ 0.55
SPECC1-202ENST00000395522 ABCC2Q92887 1545 aa18.51■□□□□ 0.55
SPECC1-202ENST00000395522 KDM5AP29375 1690 aaKnown RBP18.51■□□□□ 0.55
SPECC1-202ENST00000395522 MVPQ14764 893 aaKnown RBP18.51■□□□□ 0.55
SPECC1-202ENST00000395522 ZKSCAN2Q63HK3 967 aa18.51■□□□□ 0.55
SPECC1-202ENST00000395522 SSH1Q8WYL5 1049 aa18.51■□□□□ 0.55
SPECC1-202ENST00000395522 TRIM27P14373 513 aa18.5■□□□□ 0.55
SPECC1-202ENST00000395522 SRPK2P78362 688 aaKnown RBP18.5■□□□□ 0.55
SPECC1-202ENST00000395522 NOB1Q9ULX3 412 aaKnown RBP18.49■□□□□ 0.55
SPECC1-202ENST00000395522 NLRP1Q9C000 1473 aa18.48■□□□□ 0.55
SPECC1-202ENST00000395522 TRPM2O94759 1503 aa18.48■□□□□ 0.55
SPECC1-202ENST00000395522 CHD1O14646 1710 aa18.48■□□□□ 0.55
SPECC1-202ENST00000395522 THUMPD2Q9BTF0 503 aaKnown RBP18.48■□□□□ 0.55
SPECC1-202ENST00000395522 MYH16Q9H6N6 1097 aa18.48■□□□□ 0.55
SPECC1-202ENST00000395522 POLR3AO14802 1390 aaPredicted RBP18.48■□□□□ 0.55
SPECC1-202ENST00000395522 TMEM57Q8N5G2 664 aa18.47■□□□□ 0.55
SPECC1-202ENST00000395522 XRCC6P12956 609 aaKnown RBP eCLIP18.47■□□□□ 0.55
SPECC1-202ENST00000395522 PTPRTO14522 1441 aa18.46■□□□□ 0.55
SPECC1-202ENST00000395522 NPC1L1Q9UHC9 1359 aa18.46■□□□□ 0.55
SPECC1-202ENST00000395522 MINK1Q8N4C8 1332 aaPredicted RBP18.46■□□□□ 0.55
SPECC1-202ENST00000395522 CEP152O94986 1710 aa18.46■□□□□ 0.55
SPECC1-202ENST00000395522 ABCC1P33527 1531 aa18.46■□□□□ 0.55
SPECC1-202ENST00000395522 SPHKAPQ2M3C7 1700 aa18.46■□□□□ 0.54
SPECC1-202ENST00000395522 GOLGA6L3A6NEY3 463 aa18.45■□□□□ 0.54
SPECC1-202ENST00000395522 MCM4P33991 863 aa18.45■□□□□ 0.54
SPECC1-202ENST00000395522 CLASP1Q7Z460 1538 aa18.44■□□□□ 0.54
SPECC1-202ENST00000395522 FAM43AQ8N2R8 423 aa18.44■□□□□ 0.54
SPECC1-202ENST00000395522 ABCA6Q8N139 1617 aa18.44■□□□□ 0.54
SPECC1-202ENST00000395522 NAP1L5Q96NT1 182 aaPredicted RBP18.44■□□□□ 0.54
SPECC1-202ENST00000395522 RIPK4P57078 832 aa18.43■□□□□ 0.54
SPECC1-202ENST00000395522 HSP90AA1P07900 732 aaKnown RBP18.43■□□□□ 0.54
SPECC1-202ENST00000395522 WDR63Q8IWG1 891 aa18.43■□□□□ 0.54
SPECC1-202ENST00000395522 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.43■□□□□ 0.54
SPECC1-202ENST00000395522 TRAK2O60296 914 aa18.42■□□□□ 0.54
SPECC1-202ENST00000395522 HMOX1P09601 288 aa18.41■□□□□ 0.54
SPECC1-202ENST00000395522 HSCBQ8IWL3 235 aa18.41■□□□□ 0.54
SPECC1-202ENST00000395522 ZFYVE16Q7Z3T8 1539 aa18.41■□□□□ 0.54
SPECC1-202ENST00000395522 FANCAO15360 1455 aa18.41■□□□□ 0.54
SPECC1-202ENST00000395522 TMPOP42166 694 aaKnown RBP18.41■□□□□ 0.54
SPECC1-202ENST00000395522 RBM42Q9BTD8 480 aaKnown RBP18.41■□□□□ 0.54
SPECC1-202ENST00000395522 APBB1O00213 710 aa18.39■□□□□ 0.54
SPECC1-202ENST00000395522 ZCCHC11Q5TAX3 1644 aaKnown RBP18.39■□□□□ 0.54
SPECC1-202ENST00000395522 ATF7IPQ6VMQ6 1270 aa18.39■□□□□ 0.53
SPECC1-202ENST00000395522 ANKRD45Q5TZF3 282 aa18.39■□□□□ 0.53
SPECC1-202ENST00000395522 TRIM35Q9UPQ4 493 aa18.39■□□□□ 0.53
SPECC1-202ENST00000395522 L1TD1Q5T7N2 865 aaKnown RBP18.38■□□□□ 0.53
SPECC1-202ENST00000395522 ADGRL1O94910 1474 aa18.37■□□□□ 0.53
SPECC1-202ENST00000395522 HSP90AB1P08238 724 aaKnown RBP18.37■□□□□ 0.53
SPECC1-202ENST00000395522 CD2BP2O95400 341 aaKnown RBP18.36■□□□□ 0.53
SPECC1-202ENST00000395522 C14orf93Q9H972 538 aaKnown RBP18.36■□□□□ 0.53
SPECC1-202ENST00000395522 NINLQ9Y2I6 1382 aa18.36■□□□□ 0.53
SPECC1-202ENST00000395522 PHF23Q9BUL5 403 aaPredicted RBP18.36■□□□□ 0.53
SPECC1-202ENST00000395522 CHMP5Q9NZZ3 219 aa18.36■□□□□ 0.53
SPECC1-202ENST00000395522 MAP3K4Q9Y6R4 1608 aa18.36■□□□□ 0.53
SPECC1-202ENST00000395522 ATP7AQ04656 1500 aa18.36■□□□□ 0.53
SPECC1-202ENST00000395522 EVC2Q86UK5 1308 aa18.36■□□□□ 0.53
SPECC1-202ENST00000395522 NGEFQ8N5V2 710 aa18.35■□□□□ 0.53
SPECC1-202ENST00000395522 STAC3Q96MF2 364 aa18.35■□□□□ 0.53
SPECC1-202ENST00000395522 DDX19BQ9UMR2 479 aa18.35■□□□□ 0.53
SPECC1-202ENST00000395522 RAPGEF3O95398 923 aa18.34■□□□□ 0.53
SPECC1-202ENST00000395522 ZNF518AQ6AHZ1 1483 aa18.33■□□□□ 0.53
SPECC1-202ENST00000395522 MROH2AA6NES4 1674 aa18.33■□□□□ 0.53
SPECC1-202ENST00000395522 ATAD2Q6PL18 1390 aa18.33■□□□□ 0.53
SPECC1-202ENST00000395522 SHPRHQ149N8 1683 aa18.33■□□□□ 0.52
SPECC1-202ENST00000395522 CD109Q6YHK3 1445 aa18.33■□□□□ 0.52
SPECC1-202ENST00000395522 TSPYL6Q8N831 410 aa18.32■□□□□ 0.52
SPECC1-202ENST00000395522 RSPH6AQ9H0K4 717 aa18.32■□□□□ 0.52
SPECC1-202ENST00000395522 IQSEC2Q5JU85 1478 aa18.32■□□□□ 0.52
SPECC1-202ENST00000395522 PRKAR2BP31323 418 aa18.31■□□□□ 0.52
SPECC1-202ENST00000395522 A0A1W2PP64 1363 aa18.31■□□□□ 0.52
SPECC1-202ENST00000395522 VIRMAQ69YN4 1812 aaKnown RBP18.31■□□□□ 0.52
SPECC1-202ENST00000395522 TNPO1Q92973 898 aaKnown RBP18.31■□□□□ 0.52
SPECC1-202ENST00000395522 PRAM1Q96QH2 718 aa18.31■□□□□ 0.52
SPECC1-202ENST00000395522 PNNQ9H307 717 aaKnown RBP18.31■□□□□ 0.52
SPECC1-202ENST00000395522 TET3O43151 1660 aa18.3■□□□□ 0.52
SPECC1-202ENST00000395522 SLC24A1O60721 1099 aa18.3■□□□□ 0.52
SPECC1-202ENST00000395522 FYB1O15117 783 aa18.3■□□□□ 0.52
SPECC1-202ENST00000395522 ZBTB40Q9NUA8 1239 aa18.3■□□□□ 0.52
SPECC1-202ENST00000395522 PLEKHF1Q96S99 279 aa18.29■□□□□ 0.52
SPECC1-202ENST00000395522 DCTN1Q14203 1278 aa18.29■□□□□ 0.52
SPECC1-202ENST00000395522 GAS2L3Q86XJ1 694 aa18.29■□□□□ 0.52
SPECC1-202ENST00000395522 PHACTR3Q96KR7 559 aa18.29■□□□□ 0.52
SPECC1-202ENST00000395522 DIAPH1O60610 1272 aaKnown RBP18.28■□□□□ 0.52
SPECC1-202ENST00000395522 CCDC27Q2M243 656 aa18.28■□□□□ 0.52
SPECC1-202ENST00000395522 CHD1LQ86WJ1 897 aa18.28■□□□□ 0.52
SPECC1-202ENST00000395522 CABP1Q9NZU7 370 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms