RNA–Protein interactions for RNA: ENST00000395388.6

HLA-DRA-202, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DRA, Length 1,280 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-202ENST00000395388 MSH6P52701 1360 aa17.63■□□□□ 0.41
HLA-DRA-202ENST00000395388 ATF3P18847 181 aa17.62■□□□□ 0.41
HLA-DRA-202ENST00000395388 USP47Q96K76 1375 aa17.62■□□□□ 0.41
HLA-DRA-202ENST00000395388 PLEKHH1Q9ULM0 1364 aa17.62■□□□□ 0.41
HLA-DRA-202ENST00000395388 ST20-MTHFSA0A0A6YYL1 179 aa17.61■□□□□ 0.41
HLA-DRA-202ENST00000395388 MINK1Q8N4C8 1332 aaPredicted RBP17.61■□□□□ 0.41
HLA-DRA-202ENST00000395388 ARHGEF28Q8N1W1 1705 aaKnown RBP17.61■□□□□ 0.41
HLA-DRA-202ENST00000395388 CADPS2Q86UW7 1296 aa17.59■□□□□ 0.41
HLA-DRA-202ENST00000395388 HSPA5P11021 654 aaKnown RBP17.58■□□□□ 0.4
HLA-DRA-202ENST00000395388 HIRIP3Q9BW71 556 aaPredicted RBP17.58■□□□□ 0.4
HLA-DRA-202ENST00000395388 ADGRL3Q9HAR2 1447 aa17.57■□□□□ 0.4
HLA-DRA-202ENST00000395388 TOM1O60784 492 aa17.57■□□□□ 0.4
HLA-DRA-202ENST00000395388 IQSEC2Q5JU85 1478 aa17.56■□□□□ 0.4
HLA-DRA-202ENST00000395388 EVC2Q86UK5 1308 aa17.56■□□□□ 0.4
HLA-DRA-202ENST00000395388 WASLO00401 505 aaPredicted RBP17.55■□□□□ 0.4
HLA-DRA-202ENST00000395388 TMF1P82094 1093 aa17.55■□□□□ 0.4
HLA-DRA-202ENST00000395388 XIRP1Q702N8 1843 aaKnown RBP17.55■□□□□ 0.4
HLA-DRA-202ENST00000395388 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.55■□□□□ 0.4
HLA-DRA-202ENST00000395388 QRICH2Q9H0J4 1663 aa17.55■□□□□ 0.4
HLA-DRA-202ENST00000395388 CDK19Q9BWU1 502 aa17.54■□□□□ 0.4
HLA-DRA-202ENST00000395388 SRPK2P78362 688 aaKnown RBP17.53■□□□□ 0.4
HLA-DRA-202ENST00000395388 DCCP43146 1447 aa17.53■□□□□ 0.4
HLA-DRA-202ENST00000395388 SBNO2Q9Y2G9 1366 aa17.53■□□□□ 0.4
HLA-DRA-202ENST00000395388 UBAP1LF5GYI3 381 aa17.52■□□□□ 0.4
HLA-DRA-202ENST00000395388 CDCA8Q53HL2 280 aa17.52■□□□□ 0.4
HLA-DRA-202ENST00000395388 NALCNQ8IZF0 1738 aa17.52■□□□□ 0.39
HLA-DRA-202ENST00000395388 NUTM2FA1L443 756 aa17.51■□□□□ 0.39
HLA-DRA-202ENST00000395388 TESK2Q96S53 571 aa17.51■□□□□ 0.39
HLA-DRA-202ENST00000395388 SLAIN2Q9P270 581 aa17.51■□□□□ 0.39
HLA-DRA-202ENST00000395388 CDC42BPGQ6DT37 1551 aa17.49■□□□□ 0.39
HLA-DRA-202ENST00000395388 CABP2Q9NPB3 220 aa17.48■□□□□ 0.39
HLA-DRA-202ENST00000395388 ADGRB2O60241 1585 aa17.48■□□□□ 0.39
HLA-DRA-202ENST00000395388 SCAF1Q9H7N4 1312 aaKnown RBP17.47■□□□□ 0.39
HLA-DRA-202ENST00000395388 NUDT16Q96DE0 195 aaKnown RBP17.47■□□□□ 0.39
HLA-DRA-202ENST00000395388 PUS7Q96PZ0 661 aaKnown RBP17.47■□□□□ 0.39
HLA-DRA-202ENST00000395388 ESCO1Q5FWF5 840 aa17.46■□□□□ 0.39
HLA-DRA-202ENST00000395388 PIP4K2BP78356 416 aa17.45■□□□□ 0.38
HLA-DRA-202ENST00000395388 POLR3GLQ9BT43 218 aa17.45■□□□□ 0.38
HLA-DRA-202ENST00000395388 CCDC61Q9Y6R9 512 aa17.45■□□□□ 0.38
HLA-DRA-202ENST00000395388 ANKARQ7Z5J8 1434 aa17.45■□□□□ 0.38
HLA-DRA-202ENST00000395388 MST1RQ04912 1400 aa17.44■□□□□ 0.38
HLA-DRA-202ENST00000395388 FMN2Q9NZ56 1722 aa17.44■□□□□ 0.38
HLA-DRA-202ENST00000395388 C1orf167Q5SNV9 1468 aa17.44■□□□□ 0.38
HLA-DRA-202ENST00000395388 ATAD2Q6PL18 1390 aa17.43■□□□□ 0.38
HLA-DRA-202ENST00000395388 TULP4Q9NRJ4 1543 aa17.43■□□□□ 0.38
HLA-DRA-202ENST00000395388 TMC1Q8TDI8 760 aa17.42■□□□□ 0.38
HLA-DRA-202ENST00000395388 ORAI2Q96SN7 254 aa17.42■□□□□ 0.38
HLA-DRA-202ENST00000395388 PHF8Q9UPP1 1060 aa17.42■□□□□ 0.38
HLA-DRA-202ENST00000395388 DISP3Q9P2K9 1392 aa17.41■□□□□ 0.38
HLA-DRA-202ENST00000395388 NGDNQ8NEJ9 315 aaKnown RBP17.4■□□□□ 0.38
HLA-DRA-202ENST00000395388 CABP1Q9NZU7 370 aa17.4■□□□□ 0.38
HLA-DRA-202ENST00000395388 PRR36Q9H6K5 1346 aa17.4■□□□□ 0.38
HLA-DRA-202ENST00000395388 BRINP3Q76B58 766 aa17.39■□□□□ 0.37
HLA-DRA-202ENST00000395388 PMFBP1Q8TBY8 1022 aa17.39■□□□□ 0.37
HLA-DRA-202ENST00000395388 PLEKHG3A1L390 1219 aa17.38■□□□□ 0.37
HLA-DRA-202ENST00000395388 PPIP5K1Q6PFW1 1433 aa17.38■□□□□ 0.37
HLA-DRA-202ENST00000395388 PSME1Q06323 249 aa17.37■□□□□ 0.37
HLA-DRA-202ENST00000395388 ITSN1Q15811 1721 aa17.37■□□□□ 0.37
HLA-DRA-202ENST00000395388 RGPD8O14715 1765 aaPredicted RBP17.37■□□□□ 0.37
HLA-DRA-202ENST00000395388 ATP7BP35670 1465 aa17.37■□□□□ 0.37
HLA-DRA-202ENST00000395388 C11orf95C9JLR9 678 aaPredicted RBP17.36■□□□□ 0.37
HLA-DRA-202ENST00000395388 FOXO3O43524 673 aa17.36■□□□□ 0.37
HLA-DRA-202ENST00000395388 HDGFL2Q7Z4V5 671 aaPredicted RBP17.36■□□□□ 0.37
HLA-DRA-202ENST00000395388 ZNF692Q9BU19 519 aaPredicted RBP17.36■□□□□ 0.37
HLA-DRA-202ENST00000395388 TERF2IPQ9NYB0 399 aa17.36■□□□□ 0.37
HLA-DRA-202ENST00000395388 FBXO41Q8TF61 875 aa17.35■□□□□ 0.37
HLA-DRA-202ENST00000395388 SLC12A5Q9H2X9 1139 aa17.35■□□□□ 0.37
HLA-DRA-202ENST00000395388 NPHP3Q7Z494 1330 aa17.35■□□□□ 0.37
HLA-DRA-202ENST00000395388 NINLQ9Y2I6 1382 aa17.35■□□□□ 0.37
HLA-DRA-202ENST00000395388 USP32Q8NFA0 1604 aa17.35■□□□□ 0.37
HLA-DRA-202ENST00000395388 ACEP12821 1306 aa17.34■□□□□ 0.37
HLA-DRA-202ENST00000395388 KIF7Q2M1P5 1343 aa17.34■□□□□ 0.37
HLA-DRA-202ENST00000395388 KIF1AQ12756 1690 aa17.33■□□□□ 0.37
HLA-DRA-202ENST00000395388 ROBO1Q9Y6N7 1651 aa17.33■□□□□ 0.37
HLA-DRA-202ENST00000395388 ZNF316A6NFI3 1004 aaPredicted RBP17.33■□□□□ 0.36
HLA-DRA-202ENST00000395388 KRT28Q7Z3Y7 464 aa17.32■□□□□ 0.36
HLA-DRA-202ENST00000395388 CCDC7Q96M83 1385 aa17.31■□□□□ 0.36
HLA-DRA-202ENST00000395388 PIAS4Q8N2W9 510 aaPredicted RBP17.31■□□□□ 0.36
HLA-DRA-202ENST00000395388 POLR3AO14802 1390 aaPredicted RBP17.3■□□□□ 0.36
HLA-DRA-202ENST00000395388 WASHC2AQ641Q2 1341 aa17.3■□□□□ 0.36
HLA-DRA-202ENST00000395388 TOPAZ1Q8N9V7 1692 aa17.29■□□□□ 0.36
HLA-DRA-202ENST00000395388 PAK3O75914 559 aaPredicted RBP17.29■□□□□ 0.36
HLA-DRA-202ENST00000395388 DDX17Q92841 729 aaKnown RBP17.29■□□□□ 0.36
HLA-DRA-202ENST00000395388 KTN1Q86UP2 1357 aaKnown RBP17.28■□□□□ 0.36
HLA-DRA-202ENST00000395388 XPCQ01831 940 aaPredicted RBP17.28■□□□□ 0.36
HLA-DRA-202ENST00000395388 LRRC59Q96AG4 307 aaKnown RBP17.28■□□□□ 0.36
HLA-DRA-202ENST00000395388 BRD4O60885 1362 aaPredicted RBP17.27■□□□□ 0.35
HLA-DRA-202ENST00000395388 ANKRD36BQ8N2N9 1353 aa17.27■□□□□ 0.35
HLA-DRA-202ENST00000395388 SOS2Q07890 1332 aaPredicted RBP17.26■□□□□ 0.35
HLA-DRA-202ENST00000395388 LMOD2Q6P5Q4 547 aa17.26■□□□□ 0.35
HLA-DRA-202ENST00000395388 PANK3Q9H999 370 aa17.26■□□□□ 0.35
HLA-DRA-202ENST00000395388 AHDC1Q5TGY3 1603 aaPredicted RBP17.25■□□□□ 0.35
HLA-DRA-202ENST00000395388 PHLPP1O60346 1717 aa17.24■□□□□ 0.35
HLA-DRA-202ENST00000395388 CPSF1Q10570 1443 aaKnown RBP17.24■□□□□ 0.35
HLA-DRA-202ENST00000395388 HSPA1LP34931 641 aa17.24■□□□□ 0.35
HLA-DRA-202ENST00000395388 A0A1W2PP64 1363 aa17.24■□□□□ 0.35
HLA-DRA-202ENST00000395388 NHSL1Q5SYE7 1610 aa17.24■□□□□ 0.35
HLA-DRA-202ENST00000395388 SBNO1A3KN83 1393 aa17.23■□□□□ 0.35
HLA-DRA-202ENST00000395388 USP6P35125 1406 aa17.22■□□□□ 0.35
HLA-DRA-202ENST00000395388 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms