RNA–Protein interactions for RNA: ENST00000395366.2

PPP1CB-203, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 4,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-203ENST00000395366 MFAP1P55081 439 aaKnown RBP18.44■□□□□ 0.54
PPP1CB-203ENST00000395366 ABCA8O94911 1581 aa18.43■□□□□ 0.54
PPP1CB-203ENST00000395366 KIF16BQ96L93 1317 aa18.42■□□□□ 0.54
PPP1CB-203ENST00000395366 PPP6R1Q9UPN7 881 aa18.42■□□□□ 0.54
PPP1CB-203ENST00000395366 ARHGEF12Q9NZN5 1544 aa18.42■□□□□ 0.54
PPP1CB-203ENST00000395366 TEFQ10587 303 aa18.41■□□□□ 0.54
PPP1CB-203ENST00000395366 KCNJ4P48050 445 aa18.41■□□□□ 0.54
PPP1CB-203ENST00000395366 CCDC61Q9Y6R9 512 aa18.41■□□□□ 0.54
PPP1CB-203ENST00000395366 GCC2Q8IWJ2 1684 aa18.41■□□□□ 0.54
PPP1CB-203ENST00000395366 NCLP19338 710 aaKnown RBP18.4■□□□□ 0.54
PPP1CB-203ENST00000395366 C1orf141Q5JVX7 400 aa18.4■□□□□ 0.54
PPP1CB-203ENST00000395366 API5Q9BZZ5 524 aaKnown RBP18.4■□□□□ 0.54
PPP1CB-203ENST00000395366 BCAR3O75815 825 aa18.39■□□□□ 0.54
PPP1CB-203ENST00000395366 EXOSC9Q06265 439 aaKnown RBP18.39■□□□□ 0.54
PPP1CB-203ENST00000395366 TEX14Q8IWB6 1497 aa18.39■□□□□ 0.54
PPP1CB-203ENST00000395366 VSIG10Q8N0Z9 540 aa18.39■□□□□ 0.53
PPP1CB-203ENST00000395366 NUDT16Q96DE0 195 aaKnown RBP18.39■□□□□ 0.53
PPP1CB-203ENST00000395366 ANKRD45Q5TZF3 282 aa18.39■□□□□ 0.53
PPP1CB-203ENST00000395366 MCCP23508 829 aa18.39■□□□□ 0.53
PPP1CB-203ENST00000395366 TESK2Q96S53 571 aa18.39■□□□□ 0.53
PPP1CB-203ENST00000395366 ABTB2Q8N961 1025 aa18.38■□□□□ 0.53
PPP1CB-203ENST00000395366 TSR2Q969E8 191 aaKnown RBP18.38■□□□□ 0.53
PPP1CB-203ENST00000395366 WDR63Q8IWG1 891 aa18.38■□□□□ 0.53
PPP1CB-203ENST00000395366 SLKQ9H2G2 1235 aaPredicted RBP18.38■□□□□ 0.53
PPP1CB-203ENST00000395366 ZNF330Q9Y3S2 320 aaPredicted RBP18.38■□□□□ 0.53
PPP1CB-203ENST00000395366 HDAC5Q9UQL6 1122 aa18.37■□□□□ 0.53
PPP1CB-203ENST00000395366 TSPYL4Q9UJ04 414 aa18.36■□□□□ 0.53
PPP1CB-203ENST00000395366 MBD5Q9P267 1494 aa18.35■□□□□ 0.53
PPP1CB-203ENST00000395366 SLFN5Q08AF3 891 aa18.35■□□□□ 0.53
PPP1CB-203ENST00000395366 AAMPQ13685 434 aa18.35■□□□□ 0.53
PPP1CB-203ENST00000395366 WWC1Q8IX03 1113 aa18.35■□□□□ 0.53
PPP1CB-203ENST00000395366 FANCIQ9NVI1 1328 aa18.35■□□□□ 0.53
PPP1CB-203ENST00000395366 PDE3AQ14432 1141 aa18.35■□□□□ 0.53
PPP1CB-203ENST00000395366 ESCO1Q5FWF5 840 aa18.35■□□□□ 0.53
PPP1CB-203ENST00000395366 CEBPAP49715 358 aaPredicted RBP18.34■□□□□ 0.53
PPP1CB-203ENST00000395366 NECTIN2Q92692 538 aa18.34■□□□□ 0.53
PPP1CB-203ENST00000395366 UHRF1BP1Q6BDS2 1440 aa18.34■□□□□ 0.53
PPP1CB-203ENST00000395366 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.34■□□□□ 0.531e-15■■□□□ 13.7
PPP1CB-203ENST00000395366 ATF3P18847 181 aa18.34■□□□□ 0.53
PPP1CB-203ENST00000395366 EIF2S2P20042 333 aaKnown RBP18.34■□□□□ 0.53
PPP1CB-203ENST00000395366 ANKLE2Q86XL3 938 aa18.34■□□□□ 0.53
PPP1CB-203ENST00000395366 SULT6B1Q6IMI4 303 aa18.34■□□□□ 0.53
PPP1CB-203ENST00000395366 RRS1Q15050 365 aaKnown RBP18.33■□□□□ 0.53
PPP1CB-203ENST00000395366 GPRASP1Q5JY77 1395 aa18.33■□□□□ 0.52
PPP1CB-203ENST00000395366 KDM6BO15054 1643 aa18.33■□□□□ 0.52
PPP1CB-203ENST00000395366 ARHGEF5Q12774 1597 aa18.32■□□□□ 0.52
PPP1CB-203ENST00000395366 ATP7AQ04656 1500 aa18.32■□□□□ 0.52
PPP1CB-203ENST00000395366 TRIM6-TRIM34B2RNG4 842 aa18.32■□□□□ 0.52
PPP1CB-203ENST00000395366 AMER1Q5JTC6 1135 aaPredicted RBP18.32■□□□□ 0.52
PPP1CB-203ENST00000395366 ADGBQ8N7X0 1667 aa18.32■□□□□ 0.52
PPP1CB-203ENST00000395366 KIAA1211Q6ZU35 1233 aa18.31■□□□□ 0.52
PPP1CB-203ENST00000395366 PROSER2Q86WR7 435 aaPredicted RBP18.31■□□□□ 0.52
PPP1CB-203ENST00000395366 FCHSD2O94868 740 aa18.31■□□□□ 0.52
PPP1CB-203ENST00000395366 FGD1P98174 961 aa18.31■□□□□ 0.52
PPP1CB-203ENST00000395366 EIF2AK4Q9P2K8 1649 aaKnown RBP18.31■□□□□ 0.52
PPP1CB-203ENST00000395366 FKBP5Q13451 457 aaPredicted RBP18.3■□□□□ 0.52
PPP1CB-203ENST00000395366 WASLO00401 505 aaPredicted RBP18.3■□□□□ 0.52
PPP1CB-203ENST00000395366 TMPOP42166 694 aaKnown RBP18.29■□□□□ 0.52
PPP1CB-203ENST00000395366 TPRNQ4KMQ1 711 aa18.29■□□□□ 0.52
PPP1CB-203ENST00000395366 MAST1Q9Y2H9 1570 aa18.29■□□□□ 0.52
PPP1CB-203ENST00000395366 NPHP1O15259 732 aa18.28■□□□□ 0.52
PPP1CB-203ENST00000395366 GAS2L2Q8NHY3 880 aa18.28■□□□□ 0.52
PPP1CB-203ENST00000395366 PARD3Q8TEW0 1356 aa18.28■□□□□ 0.52
PPP1CB-203ENST00000395366 TWISTNBQ3B726 338 aaPredicted RBP18.28■□□□□ 0.52
PPP1CB-203ENST00000395366 SLC4A3P48751 1232 aa18.27■□□□□ 0.52
PPP1CB-203ENST00000395366 NME9Q86XW9 330 aa18.27■□□□□ 0.52
PPP1CB-203ENST00000395366 CT47B1P0C2W7 299 aaPredicted RBP18.27■□□□□ 0.52
PPP1CB-203ENST00000395366 CHMP3Q9Y3E7 222 aa18.26■□□□□ 0.51
PPP1CB-203ENST00000395366 UHRF1BP1LA0JNW5 1464 aa18.26■□□□□ 0.51
PPP1CB-203ENST00000395366 CHD1O14646 1710 aa18.26■□□□□ 0.51
PPP1CB-203ENST00000395366 RAPGEF4Q8WZA2 1011 aa18.26■□□□□ 0.51
PPP1CB-203ENST00000395366 LNPKQ9C0E8 428 aa18.26■□□□□ 0.51
PPP1CB-203ENST00000395366 NOB1Q9ULX3 412 aaKnown RBP18.25■□□□□ 0.51
PPP1CB-203ENST00000395366 MYO5CQ9NQX4 1742 aa18.25■□□□□ 0.51
PPP1CB-203ENST00000395366 AMOTL2Q9Y2J4 779 aa18.25■□□□□ 0.51
PPP1CB-203ENST00000395366 SAMD9LQ8IVG5 1584 aa18.25■□□□□ 0.51
PPP1CB-203ENST00000395366 PER1O15534 1290 aaPredicted RBP18.24■□□□□ 0.51
PPP1CB-203ENST00000395366 EVA1CP58658 441 aa18.24■□□□□ 0.51
PPP1CB-203ENST00000395366 GPATCH3Q96I76 525 aa18.24■□□□□ 0.51
PPP1CB-203ENST00000395366 NLRP2Q9NX02 1062 aa18.24■□□□□ 0.51
PPP1CB-203ENST00000395366 CCDC9Q9Y3X0 531 aaKnown RBP18.24■□□□□ 0.51
PPP1CB-203ENST00000395366 NSD2O96028 1365 aa18.24■□□□□ 0.51
PPP1CB-203ENST00000395366 TTC5Q8N0Z6 440 aa18.24■□□□□ 0.51
PPP1CB-203ENST00000395366 ASXL1Q8IXJ9 1541 aa18.23■□□□□ 0.51
PPP1CB-203ENST00000395366 TNRQ92752 1358 aa18.23■□□□□ 0.51
PPP1CB-203ENST00000395366 TRIM44Q96DX7 344 aaPredicted RBP18.23■□□□□ 0.51
PPP1CB-203ENST00000395366 NINLQ9Y2I6 1382 aa18.23■□□□□ 0.51
PPP1CB-203ENST00000395366 NFE2L2Q16236 605 aa18.23■□□□□ 0.51
PPP1CB-203ENST00000395366 EMILIN1Q9Y6C2 1016 aa18.22■□□□□ 0.51
PPP1CB-203ENST00000395366 DUSP27Q5VZP5 1158 aa18.22■□□□□ 0.51
PPP1CB-203ENST00000395366 ATF7IPQ6VMQ6 1270 aa18.22■□□□□ 0.51
PPP1CB-203ENST00000395366 NAP1L2Q9ULW6 460 aaPredicted RBP18.22■□□□□ 0.51
PPP1CB-203ENST00000395366 C9orf78Q9NZ63 289 aaPredicted RBP18.21■□□□□ 0.51
PPP1CB-203ENST00000395366 TTC37Q6PGP7 1564 aa18.21■□□□□ 0.51
PPP1CB-203ENST00000395366 COL17A1Q9UMD9 1497 aaPredicted RBP18.21■□□□□ 0.51
PPP1CB-203ENST00000395366 C20orf194Q5TEA3 1177 aa18.2■□□□□ 0.5
PPP1CB-203ENST00000395366 NEXNQ0ZGT2 675 aa18.19■□□□□ 0.5
PPP1CB-203ENST00000395366 RILPL2Q969X0 211 aa18.19■□□□□ 0.5
PPP1CB-203ENST00000395366 ANKRD36BQ8N2N9 1353 aa18.19■□□□□ 0.5
PPP1CB-203ENST00000395366 GBP4Q96PP9 640 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms