RNA–Protein interactions for RNA: ENST00000395205.6

BBS4-202, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best) BASIC

Gene BBS4, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-202ENST00000395205 CDK19Q9BWU1 502 aa13.55□□□□□ -0.24
BBS4-202ENST00000395205 SETD1AO15047 1707 aaKnown RBP13.55□□□□□ -0.24
BBS4-202ENST00000395205 POLR1AO95602 1720 aaPredicted RBP13.55□□□□□ -0.24
BBS4-202ENST00000395205 PTPRUQ92729 1446 aa13.55□□□□□ -0.24
BBS4-202ENST00000395205 PUS7Q96PZ0 661 aaKnown RBP13.55□□□□□ -0.24
BBS4-202ENST00000395205 ARHGEF28Q8N1W1 1705 aaKnown RBP13.55□□□□□ -0.24
BBS4-202ENST00000395205 ROBO2Q9HCK4 1378 aa13.55□□□□□ -0.24
BBS4-202ENST00000395205 FAM135BQ49AJ0 1406 aa13.55□□□□□ -0.24
BBS4-202ENST00000395205 TECPR2O15040 1411 aa13.54□□□□□ -0.24
BBS4-202ENST00000395205 QRICH2Q9H0J4 1663 aa13.54□□□□□ -0.24
BBS4-202ENST00000395205 PIK3R4Q99570 1358 aa13.53□□□□□ -0.24
BBS4-202ENST00000395205 DIP2AQ14689 1571 aa13.53□□□□□ -0.24
BBS4-202ENST00000395205 KCNA6P17658 529 aa13.53□□□□□ -0.24
BBS4-202ENST00000395205 SLC12A5Q9H2X9 1139 aa13.53□□□□□ -0.24
BBS4-202ENST00000395205 GTF3C3Q9Y5Q9 886 aa13.52□□□□□ -0.24
BBS4-202ENST00000395205 WASLO00401 505 aaPredicted RBP13.52□□□□□ -0.25
BBS4-202ENST00000395205 PER1O15534 1290 aaPredicted RBP13.52□□□□□ -0.25
BBS4-202ENST00000395205 PRKRIP1Q9H875 184 aaPredicted RBP13.52□□□□□ -0.25
BBS4-202ENST00000395205 KNSTRNQ9Y448 316 aa13.52□□□□□ -0.25
BBS4-202ENST00000395205 TULP4Q9NRJ4 1543 aa13.5□□□□□ -0.25
BBS4-202ENST00000395205 CPS1P31327 1500 aa13.49□□□□□ -0.25
BBS4-202ENST00000395205 ATAD2Q6PL18 1390 aa13.49□□□□□ -0.25
BBS4-202ENST00000395205 CCER2I3L3R5 266 aa13.49□□□□□ -0.25
BBS4-202ENST00000395205 CC2D1BQ5T0F9 858 aaKnown RBP13.48□□□□□ -0.25
BBS4-202ENST00000395205 LMTK3Q96Q04 1460 aa13.48□□□□□ -0.25
BBS4-202ENST00000395205 PTCH1Q13635 1447 aa13.47□□□□□ -0.25
BBS4-202ENST00000395205 CABP1Q9NZU7 370 aa13.47□□□□□ -0.25
BBS4-202ENST00000395205 NUDT16Q96DE0 195 aaKnown RBP13.47□□□□□ -0.25
BBS4-202ENST00000395205 CARD14Q9BXL6 1004 aa13.47□□□□□ -0.25
BBS4-202ENST00000395205 KNDC1Q76NI1 1749 aa13.46□□□□□ -0.25
BBS4-202ENST00000395205 RBM33Q96EV2 1170 aaKnown RBP13.46□□□□□ -0.25
BBS4-202ENST00000395205 KTN1Q86UP2 1357 aaKnown RBP13.46□□□□□ -0.26
BBS4-202ENST00000395205 RALBP1Q15311 655 aa13.46□□□□□ -0.26
BBS4-202ENST00000395205 TERF2IPQ9NYB0 399 aa13.46□□□□□ -0.26
BBS4-202ENST00000395205 NUTM2FA1L443 756 aa13.45□□□□□ -0.26
BBS4-202ENST00000395205 NINLQ9Y2I6 1382 aa13.45□□□□□ -0.26
BBS4-202ENST00000395205 HDGFL2Q7Z4V5 671 aaPredicted RBP13.45□□□□□ -0.26
BBS4-202ENST00000395205 C14orf37Q86TY3 774 aa13.45□□□□□ -0.26
BBS4-202ENST00000395205 PROSER2Q86WR7 435 aaPredicted RBP13.45□□□□□ -0.26
BBS4-202ENST00000395205 CCDC61Q9Y6R9 512 aa13.44□□□□□ -0.26
BBS4-202ENST00000395205 AMER1Q5JTC6 1135 aaPredicted RBP13.44□□□□□ -0.26
BBS4-202ENST00000395205 YTHDC1Q96MU7 727 aaKnown RBP13.43□□□□□ -0.26
BBS4-202ENST00000395205 ANKRD36BQ8N2N9 1353 aa13.43□□□□□ -0.26
BBS4-202ENST00000395205 XRN1Q8IZH2 1706 aaKnown RBP13.41□□□□□ -0.26
BBS4-202ENST00000395205 NSD3Q9BZ95 1437 aa13.41□□□□□ -0.26
BBS4-202ENST00000395205 PRR36Q9H6K5 1346 aa13.41□□□□□ -0.26
BBS4-202ENST00000395205 MYOM1P52179 1685 aa13.41□□□□□ -0.26
BBS4-202ENST00000395205 MRS2Q9HD23 443 aa13.4□□□□□ -0.26
BBS4-202ENST00000395205 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.4□□□□□ -0.26
BBS4-202ENST00000395205 A0A1W2PP64 1363 aa13.4□□□□□ -0.26
BBS4-202ENST00000395205 CCDC184Q52MB2 194 aa13.4□□□□□ -0.26
BBS4-202ENST00000395205 PPIP5K1Q6PFW1 1433 aa13.4□□□□□ -0.26
BBS4-202ENST00000395205 MYBBP1AQ9BQG0 1328 aaKnown RBP13.4□□□□□ -0.26
BBS4-202ENST00000395205 CGNL1Q0VF96 1302 aa13.39□□□□□ -0.27
BBS4-202ENST00000395205 DMRT2Q9Y5R5 561 aa13.39□□□□□ -0.27
BBS4-202ENST00000395205 PARD3Q8TEW0 1356 aa13.38□□□□□ -0.27
BBS4-202ENST00000395205 CHD2O14647 1828 aaKnown RBP13.38□□□□□ -0.27
BBS4-202ENST00000395205 NPC1L1Q9UHC9 1359 aa13.38□□□□□ -0.27
BBS4-202ENST00000395205 MORC1Q86VD1 984 aa13.37□□□□□ -0.27
BBS4-202ENST00000395205 ADGRB2O60241 1585 aa13.37□□□□□ -0.27
BBS4-202ENST00000395205 ZNF692Q9BU19 519 aaPredicted RBP13.37□□□□□ -0.27
BBS4-202ENST00000395205 PLEKHG3A1L390 1219 aa13.36□□□□□ -0.27
BBS4-202ENST00000395205 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.36□□□□□ -0.27
BBS4-202ENST00000395205 PMFBP1Q8TBY8 1022 aa13.36□□□□□ -0.27
BBS4-202ENST00000395205 NLRP13Q86W25 1043 aa13.36□□□□□ -0.27
BBS4-202ENST00000395205 ATP7BP35670 1465 aa13.35□□□□□ -0.27
BBS4-202ENST00000395205 CD163L1Q9NR16 1453 aa13.35□□□□□ -0.27
BBS4-202ENST00000395205 ACEP12821 1306 aa13.35□□□□□ -0.27
BBS4-202ENST00000395205 NGDNQ8NEJ9 315 aaKnown RBP13.35□□□□□ -0.27
BBS4-202ENST00000395205 C19orf44Q9H6X5 657 aa13.35□□□□□ -0.27
BBS4-202ENST00000395205 ADGRL3Q9HAR2 1447 aa13.35□□□□□ -0.27
BBS4-202ENST00000395205 PPP2R1AP30153 589 aa13.34□□□□□ -0.27
BBS4-202ENST00000395205 TNNT2P45379 298 aaPredicted RBP13.34□□□□□ -0.27
BBS4-202ENST00000395205 FAM9BQ8IZU0 186 aa13.34□□□□□ -0.27
BBS4-202ENST00000395205 GGNBP2Q9H3C7 697 aa13.34□□□□□ -0.27
BBS4-202ENST00000395205 NKTRP30414 1462 aaKnown RBP13.34□□□□□ -0.27
BBS4-202ENST00000395205 NWD1Q149M9 1564 aa13.34□□□□□ -0.27
BBS4-202ENST00000395205 FYB1O15117 783 aa13.34□□□□□ -0.27
BBS4-202ENST00000395205 TMEM94Q12767 1356 aa13.34□□□□□ -0.27
BBS4-202ENST00000395205 ZNF335Q9H4Z2 1342 aaPredicted RBP13.33□□□□□ -0.27
BBS4-202ENST00000395205 CPSF1Q10570 1443 aaKnown RBP13.33□□□□□ -0.27
BBS4-202ENST00000395205 STRCQ7RTU9 1775 aa13.33□□□□□ -0.28
BBS4-202ENST00000395205 BRD4O60885 1362 aaPredicted RBP13.33□□□□□ -0.28
BBS4-202ENST00000395205 ATF3P18847 181 aa13.33□□□□□ -0.28
BBS4-202ENST00000395205 ANKARQ7Z5J8 1434 aa13.33□□□□□ -0.28
BBS4-202ENST00000395205 ESCO1Q5FWF5 840 aa13.32□□□□□ -0.28
BBS4-202ENST00000395205 NSD2O96028 1365 aa13.32□□□□□ -0.28
BBS4-202ENST00000395205 PHF8Q9UPP1 1060 aa13.31□□□□□ -0.28
BBS4-202ENST00000395205 EDC4Q6P2E9 1401 aaKnown RBP13.3□□□□□ -0.28
BBS4-202ENST00000395205 NCOA3Q9Y6Q9 1424 aa13.3□□□□□ -0.28
BBS4-202ENST00000395205 NME9Q86XW9 330 aa13.3□□□□□ -0.28
BBS4-202ENST00000395205 PNISRQ8TF01 805 aaKnown RBP13.29□□□□□ -0.28
BBS4-202ENST00000395205 CDC42BPGQ6DT37 1551 aa13.29□□□□□ -0.28
BBS4-202ENST00000395205 TTC21BQ7Z4L5 1316 aa13.29□□□□□ -0.28
BBS4-202ENST00000395205 CADPS2Q86UW7 1296 aa13.28□□□□□ -0.28
BBS4-202ENST00000395205 ORAI2Q96SN7 254 aa13.28□□□□□ -0.28
BBS4-202ENST00000395205 MSH6P52701 1360 aa13.28□□□□□ -0.28
BBS4-202ENST00000395205 NALCNQ8IZF0 1738 aa13.28□□□□□ -0.28
BBS4-202ENST00000395205 POLR3AO14802 1390 aaPredicted RBP13.27□□□□□ -0.28
BBS4-202ENST00000395205 PSME1Q06323 249 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms