RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 EIF3JO75822 258 aaKnown RBP5.46□□□□□ -1.54
HERC4-204ENST00000395198 TBC1D2Q9BYX2 928 aa5.46□□□□□ -1.54
HERC4-204ENST00000395198 CT47B1P0C2W7 299 aaPredicted RBP5.46□□□□□ -1.54
HERC4-204ENST00000395198 TDO2P48775 406 aa5.46□□□□□ -1.54
HERC4-204ENST00000395198 KCNB2Q92953 911 aa5.46□□□□□ -1.54
HERC4-204ENST00000395198 QTRT2Q9H974 415 aaKnown RBP5.46□□□□□ -1.54
HERC4-204ENST00000395198 MKRN1Q9UHC7 482 aaKnown RBP5.46□□□□□ -1.54
HERC4-204ENST00000395198 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.45□□□□□ -1.54
HERC4-204ENST00000395198 IGHDP01880 384 aa5.45□□□□□ -1.54
HERC4-204ENST00000395198 CCDC85AQ96PX6 553 aaPredicted RBP5.45□□□□□ -1.54
HERC4-204ENST00000395198 PIF1Q9H611 641 aa5.45□□□□□ -1.54
HERC4-204ENST00000395198 TPX2Q9ULW0 747 aaKnown RBP5.45□□□□□ -1.54
HERC4-204ENST00000395198 TMX4Q9H1E5 349 aaPredicted RBP5.45□□□□□ -1.54
HERC4-204ENST00000395198 ANP32CO43423 234 aa5.45□□□□□ -1.54
HERC4-204ENST00000395198 TBC1D12O60347 775 aa5.45□□□□□ -1.54
HERC4-204ENST00000395198 PTPROQ16827 1216 aa5.45□□□□□ -1.54
HERC4-204ENST00000395198 WDR78Q5VTH9 848 aa5.45□□□□□ -1.54
HERC4-204ENST00000395198 PUF60Q9UHX1 559 aaKnown RBP5.45□□□□□ -1.54
HERC4-204ENST00000395198 PPP1R15AO75807 674 aaPredicted RBP5.45□□□□□ -1.54
HERC4-204ENST00000395198 ZCCHC6Q5VYS8 1495 aaKnown RBP5.44□□□□□ -1.54
HERC4-204ENST00000395198 TAGLNQ01995 201 aaKnown RBP5.44□□□□□ -1.54
HERC4-204ENST00000395198 SETDB1Q15047 1291 aa5.44□□□□□ -1.54
HERC4-204ENST00000395198 TCEAL1Q15170 157 aa5.44□□□□□ -1.54
HERC4-204ENST00000395198 COG6Q9Y2V7 657 aa5.44□□□□□ -1.54
HERC4-204ENST00000395198 NRDCO43847 1150 aa5.44□□□□□ -1.54
HERC4-204ENST00000395198 TGFB3P10600 412 aa5.44□□□□□ -1.54
HERC4-204ENST00000395198 SRPK2P78362 688 aaKnown RBP5.44□□□□□ -1.54
HERC4-204ENST00000395198 SENP7Q9BQF6 1050 aa5.44□□□□□ -1.54
HERC4-204ENST00000395198 TLDC2A0PJX2 215 aa5.44□□□□□ -1.54
HERC4-204ENST00000395198 RECKO95980 971 aa5.44□□□□□ -1.54
HERC4-204ENST00000395198 TBX4P57082 545 aa5.44□□□□□ -1.54
HERC4-204ENST00000395198 HDAC1Q13547 482 aaPredicted RBP5.44□□□□□ -1.54
HERC4-204ENST00000395198 NBPF10Q6P3W6 841 aaKnown RBP5.44□□□□□ -1.54
HERC4-204ENST00000395198 CCDC146Q8IYE0 955 aa5.44□□□□□ -1.54
HERC4-204ENST00000395198 ENOX1Q8TC92 643 aaKnown RBP5.44□□□□□ -1.54
HERC4-204ENST00000395198 ZNF512BQ96KM6 892 aaPredicted RBP5.44□□□□□ -1.54
HERC4-204ENST00000395198 CC2D1BQ5T0F9 858 aaKnown RBP5.43□□□□□ -1.54
HERC4-204ENST00000395198 SLC39A13Q96H72 371 aa5.43□□□□□ -1.54
HERC4-204ENST00000395198 TBX22Q9Y458 520 aa5.43□□□□□ -1.54
HERC4-204ENST00000395198 TCERG1O14776 1098 aaKnown RBP5.43□□□□□ -1.54
HERC4-204ENST00000395198 CALRP27797 417 aaKnown RBP5.43□□□□□ -1.54
HERC4-204ENST00000395198 LMOD3Q0VAK6 560 aa5.43□□□□□ -1.54
HERC4-204ENST00000395198 PDAP1Q13442 181 aaKnown RBP5.43□□□□□ -1.54
HERC4-204ENST00000395198 NPAS4Q8IUM7 802 aa5.43□□□□□ -1.54
HERC4-204ENST00000395198 SETD1BQ9UPS6 1966 aaKnown RBP5.43□□□□□ -1.54
HERC4-204ENST00000395198 C7P10643 843 aa5.43□□□□□ -1.54
HERC4-204ENST00000395198 NEXNQ0ZGT2 675 aa5.43□□□□□ -1.54
HERC4-204ENST00000395198 PEG3Q9GZU2 1588 aa5.42□□□□□ -1.54
HERC4-204ENST00000395198 hCG_2014768A0A024R1R8 64 aa5.42□□□□□ -1.54
HERC4-204ENST00000395198 PRR29P0C7W0 189 aa5.42□□□□□ -1.54
HERC4-204ENST00000395198 C1orf131Q8NDD1 294 aaKnown RBP5.42□□□□□ -1.54
HERC4-204ENST00000395198 INO80BQ9C086 356 aaPredicted RBP5.42□□□□□ -1.54
HERC4-204ENST00000395198 G3BP2Q9UN86 482 aaKnown RBP5.42□□□□□ -1.54
HERC4-204ENST00000395198 FAM200BP0CF97 657 aa5.42□□□□□ -1.54
HERC4-204ENST00000395198 NYAP1Q6ZVC0 841 aa5.42□□□□□ -1.54
HERC4-204ENST00000395198 TRIM44Q96DX7 344 aaPredicted RBP5.42□□□□□ -1.54
HERC4-204ENST00000395198 HSP90AB3PQ58FF7 597 aa5.42□□□□□ -1.54
HERC4-204ENST00000395198 RPS6KC1Q96S38 1066 aa5.42□□□□□ -1.54
HERC4-204ENST00000395198 COPB2P35606 906 aa5.41□□□□□ -1.54
HERC4-204ENST00000395198 JADE2Q9NQC1 790 aa5.41□□□□□ -1.54
HERC4-204ENST00000395198 STK26Q9P289 416 aa5.41□□□□□ -1.54
HERC4-204ENST00000395198 FEZ2Q9UHY8 353 aaPredicted RBP5.41□□□□□ -1.54
HERC4-204ENST00000395198 CEP126Q9P2H0 1117 aa5.41□□□□□ -1.54
HERC4-204ENST00000395198 GIGYF1O75420 1035 aaPredicted RBP5.41□□□□□ -1.54
HERC4-204ENST00000395198 FAM163BP0C2L3 166 aa5.41□□□□□ -1.54
HERC4-204ENST00000395198 PLEKHG6Q3KR16 790 aa5.41□□□□□ -1.54
HERC4-204ENST00000395198 ICE2Q659A1 982 aa5.41□□□□□ -1.54
HERC4-204ENST00000395198 PNISRQ8TF01 805 aaKnown RBP5.41□□□□□ -1.54
HERC4-204ENST00000395198 TMEM88BA6NKF7 163 aa5.41□□□□□ -1.54
HERC4-204ENST00000395198 HOXA2O43364 376 aa5.4□□□□□ -1.54
HERC4-204ENST00000395198 IGBP1P78318 339 aa5.4□□□□□ -1.54
HERC4-204ENST00000395198 SDE2Q6IQ49 451 aa5.4□□□□□ -1.54
HERC4-204ENST00000395198 KRI1Q8N9T8 703 aaKnown RBP5.4□□□□□ -1.54
HERC4-204ENST00000395198 GIPC2Q8TF65 315 aa5.4□□□□□ -1.54
HERC4-204ENST00000395198 SCYL1Q96KG9 808 aa5.4□□□□□ -1.54
HERC4-204ENST00000395198 POM121CA8CG34 1229 aa5.4□□□□□ -1.55
HERC4-204ENST00000395198 PARP9Q8IXQ6 854 aa5.4□□□□□ -1.55
HERC4-204ENST00000395198 MUC3BQ9H195 1237 aa5.4□□□□□ -1.55
HERC4-204ENST00000395198 PRDM2Q13029 1718 aa5.4□□□□□ -1.55
HERC4-204ENST00000395198 CCDC144BQ3MJ40 725 aa5.4□□□□□ -1.55
HERC4-204ENST00000395198 C1QTNF12Q5T7M4 302 aa5.4□□□□□ -1.55
HERC4-204ENST00000395198 NBPF6Q5VWK0 638 aa5.4□□□□□ -1.55
HERC4-204ENST00000395198 NBPF5PQ86XG9 351 aaPredicted RBP5.4□□□□□ -1.55
HERC4-204ENST00000395198 NBPF4Q96M43 638 aa5.4□□□□□ -1.55
HERC4-204ENST00000395198 YTHDC1Q96MU7 727 aaKnown RBP5.4□□□□□ -1.55
HERC4-204ENST00000395198 NEUROD6Q96NK8 337 aa5.4□□□□□ -1.55
HERC4-204ENST00000395198 WWC3Q9ULE0 1092 aa5.4□□□□□ -1.55
HERC4-204ENST00000395198 GAS2L2Q8NHY3 880 aa5.39□□□□□ -1.55
HERC4-204ENST00000395198 ZCRB1Q8TBF4 217 aaKnown RBP5.39□□□□□ -1.55
HERC4-204ENST00000395198 IL17RAQ96F46 866 aa5.39□□□□□ -1.55
HERC4-204ENST00000395198 ZBTB12Q9Y330 459 aaPredicted RBP5.39□□□□□ -1.55
HERC4-204ENST00000395198 ZRANB2O95218 330 aaKnown RBP eCLIP5.39□□□□□ -1.553e-7■■■■□ 26
HERC4-204ENST00000395198 NOP9Q86U38 636 aaKnown RBP5.39□□□□□ -1.55
HERC4-204ENST00000395198 LRRC27Q9C0I9 530 aa5.39□□□□□ -1.55
HERC4-204ENST00000395198 GOPCQ9HD26 462 aa5.39□□□□□ -1.55
HERC4-204ENST00000395198 SWAP70Q9UH65 585 aa5.39□□□□□ -1.55
HERC4-204ENST00000395198 USTQ9Y2C2 406 aa5.39□□□□□ -1.55
HERC4-204ENST00000395198 ZNF330Q9Y3S2 320 aaPredicted RBP5.39□□□□□ -1.55
HERC4-204ENST00000395198 MS4A1P11836 297 aa5.39□□□□□ -1.55
HERC4-204ENST00000395198 DDRGK1Q96HY6 314 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms