RNA–Protein interactions for RNA: ENST00000394805.7

MATR3-201, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-201ENST00000394805 NAP1L5Q96NT1 182 aaPredicted RBP11.07□□□□□ -0.64
MATR3-201ENST00000394805 FBLN1P23142 703 aa11.07□□□□□ -0.64
MATR3-201ENST00000394805 MVPQ14764 893 aaKnown RBP11.07□□□□□ -0.64
MATR3-201ENST00000394805 ATP10AO60312 1499 aa11.06□□□□□ -0.64
MATR3-201ENST00000394805 ERCC6L2Q5T890 1561 aa11.06□□□□□ -0.64
MATR3-201ENST00000394805 NOB1Q9ULX3 412 aaKnown RBP11.06□□□□□ -0.64
MATR3-201ENST00000394805 PLCH2O75038 1416 aa11.06□□□□□ -0.64
MATR3-201ENST00000394805 HSCBQ8IWL3 235 aa11.06□□□□□ -0.64
MATR3-201ENST00000394805 C1orf115Q9H7X2 142 aa11.06□□□□□ -0.64
MATR3-201ENST00000394805 SSH1Q8WYL5 1049 aa11.05□□□□□ -0.64
MATR3-201ENST00000394805 CFAP65Q6ZU64 1925 aaKnown RBP11.05□□□□□ -0.64
MATR3-201ENST00000394805 L1TD1Q5T7N2 865 aaKnown RBP11.05□□□□□ -0.64
MATR3-201ENST00000394805 RRAGDQ9NQL2 400 aaPredicted RBP11.05□□□□□ -0.64
MATR3-201ENST00000394805 UNC13BO14795 1591 aa11.04□□□□□ -0.64
MATR3-201ENST00000394805 TRIM27P14373 513 aa11.04□□□□□ -0.64
MATR3-201ENST00000394805 IQGAP3Q86VI3 1631 aa11.04□□□□□ -0.64
MATR3-201ENST00000394805 NOS1P29475 1434 aa11.04□□□□□ -0.64
MATR3-201ENST00000394805 RIPK4P57078 832 aa11.04□□□□□ -0.64
MATR3-201ENST00000394805 FAM43AQ8N2R8 423 aa11.04□□□□□ -0.64
MATR3-201ENST00000394805 ERVK-7P63135 1459 aa11.04□□□□□ -0.64
MATR3-201ENST00000394805 MINK1Q8N4C8 1332 aaPredicted RBP11.04□□□□□ -0.64
MATR3-201ENST00000394805 SLC24A1O60721 1099 aa11.04□□□□□ -0.64
MATR3-201ENST00000394805 HSP90AB1P08238 724 aaKnown RBP11.04□□□□□ -0.64
MATR3-201ENST00000394805 MCM4P33991 863 aa11.04□□□□□ -0.64
MATR3-201ENST00000394805 WDR63Q8IWG1 891 aa11.04□□□□□ -0.64
MATR3-201ENST00000394805 TRAK2O60296 914 aa11.04□□□□□ -0.64
MATR3-201ENST00000394805 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.03□□□□□ -0.644e-7■■■□□ 14.8
MATR3-201ENST00000394805 TMEM57Q8N5G2 664 aa11.03□□□□□ -0.64
MATR3-201ENST00000394805 XRCC6P12956 609 aaKnown RBP eCLIP11.03□□□□□ -0.649e-7■□□□□ 8.5
MATR3-201ENST00000394805 NGEFQ8N5V2 710 aa11.02□□□□□ -0.64
MATR3-201ENST00000394805 STAC3Q96MF2 364 aa11.02□□□□□ -0.64
MATR3-201ENST00000394805 APBB1O00213 710 aa11.02□□□□□ -0.65
MATR3-201ENST00000394805 ANKRD45Q5TZF3 282 aa11.02□□□□□ -0.65
MATR3-201ENST00000394805 THUMPD2Q9BTF0 503 aaKnown RBP11.02□□□□□ -0.65
MATR3-201ENST00000394805 ANTXR1Q9H6X2 564 aa11.02□□□□□ -0.65
MATR3-201ENST00000394805 MADDQ8WXG6 1647 aa11.02□□□□□ -0.65
MATR3-201ENST00000394805 POLR3AO14802 1390 aaPredicted RBP11.02□□□□□ -0.65
MATR3-201ENST00000394805 SYNMO15061 1565 aa11.02□□□□□ -0.65
MATR3-201ENST00000394805 CHMP5Q9NZZ3 219 aa11.01□□□□□ -0.65
MATR3-201ENST00000394805 NPC1L1Q9UHC9 1359 aa11.01□□□□□ -0.65
MATR3-201ENST00000394805 HMOX1P09601 288 aa11.01□□□□□ -0.65
MATR3-201ENST00000394805 ATF7IPQ6VMQ6 1270 aa11.01□□□□□ -0.65
MATR3-201ENST00000394805 TMPOP42166 694 aaKnown RBP11□□□□□ -0.65
MATR3-201ENST00000394805 DDX19BQ9UMR2 479 aa11□□□□□ -0.65
MATR3-201ENST00000394805 EVC2Q86UK5 1308 aa11□□□□□ -0.65
MATR3-201ENST00000394805 CLTCL1P53675 1640 aa11□□□□□ -0.65
MATR3-201ENST00000394805 ABCC2Q92887 1545 aa11□□□□□ -0.65
MATR3-201ENST00000394805 RSPH6AQ9H0K4 717 aa11□□□□□ -0.65
MATR3-201ENST00000394805 PNNQ9H307 717 aaKnown RBP10.99□□□□□ -0.65
MATR3-201ENST00000394805 LAMC1P11047 1609 aa10.99□□□□□ -0.65
MATR3-201ENST00000394805 NCLP19338 710 aaKnown RBP10.99□□□□□ -0.65
MATR3-201ENST00000394805 NINLQ9Y2I6 1382 aa10.99□□□□□ -0.65
MATR3-201ENST00000394805 KDM5AP29375 1690 aaKnown RBP10.99□□□□□ -0.65
MATR3-201ENST00000394805 PTPRTO14522 1441 aa10.98□□□□□ -0.65
MATR3-201ENST00000394805 RBM42Q9BTD8 480 aaKnown RBP10.98□□□□□ -0.65
MATR3-201ENST00000394805 STAG3Q9UJ98 1225 aa10.97□□□□□ -0.65
MATR3-201ENST00000394805 TRIM44Q96DX7 344 aaPredicted RBP10.97□□□□□ -0.65
MATR3-201ENST00000394805 C14orf93Q9H972 538 aaKnown RBP10.97□□□□□ -0.65
MATR3-201ENST00000394805 PLXNC1O60486 1568 aa10.97□□□□□ -0.65
MATR3-201ENST00000394805 TRPM2O94759 1503 aa10.96□□□□□ -0.65
MATR3-201ENST00000394805 IPO8O15397 1037 aaKnown RBP10.96□□□□□ -0.65
MATR3-201ENST00000394805 IQGAP1P46940 1657 aa10.96□□□□□ -0.65
MATR3-201ENST00000394805 DIAPH1O60610 1272 aaKnown RBP10.96□□□□□ -0.65
MATR3-201ENST00000394805 RNF17Q9BXT8 1623 aaKnown RBP10.96□□□□□ -0.65
MATR3-201ENST00000394805 FANCAO15360 1455 aa10.96□□□□□ -0.66
MATR3-201ENST00000394805 NPM1P06748 294 aaKnown RBP eCLIP10.96□□□□□ -0.66
MATR3-201ENST00000394805 TRIM35Q9UPQ4 493 aa10.96□□□□□ -0.66
MATR3-201ENST00000394805 PRKAR2BP31323 418 aa10.95□□□□□ -0.66
MATR3-201ENST00000394805 RAPGEF3O95398 923 aa10.95□□□□□ -0.66
MATR3-201ENST00000394805 TPRNQ4KMQ1 711 aa10.95□□□□□ -0.66
MATR3-201ENST00000394805 PRAM1Q96QH2 718 aa10.95□□□□□ -0.66
MATR3-201ENST00000394805 ADGRL1O94910 1474 aa10.94□□□□□ -0.66
MATR3-201ENST00000394805 CHD1LQ86WJ1 897 aa10.94□□□□□ -0.66
MATR3-201ENST00000394805 CLASP1Q7Z460 1538 aa10.94□□□□□ -0.66
MATR3-201ENST00000394805 SOX12O15370 315 aa10.94□□□□□ -0.66
MATR3-201ENST00000394805 TNPO1Q92973 898 aaKnown RBP10.94□□□□□ -0.66
MATR3-201ENST00000394805 AAMPQ13685 434 aa10.94□□□□□ -0.66
MATR3-201ENST00000394805 MYOM1P52179 1685 aa10.94□□□□□ -0.66
MATR3-201ENST00000394805 ABCC1P33527 1531 aa10.94□□□□□ -0.66
MATR3-201ENST00000394805 VGFO15240 615 aaPredicted RBP10.93□□□□□ -0.66
MATR3-201ENST00000394805 FOXD4L5Q5VV16 416 aaPredicted RBP10.93□□□□□ -0.66
MATR3-201ENST00000394805 FOXD4L4Q8WXT5 416 aaPredicted RBP10.93□□□□□ -0.66
MATR3-201ENST00000394805 GRPEL1Q9HAV7 217 aa10.93□□□□□ -0.66
MATR3-201ENST00000394805 CABP1Q9NZU7 370 aa10.93□□□□□ -0.66
MATR3-201ENST00000394805 NLRP1Q9C000 1473 aa10.93□□□□□ -0.66
MATR3-201ENST00000394805 CCDC27Q2M243 656 aa10.93□□□□□ -0.66
MATR3-201ENST00000394805 FYB1O15117 783 aa10.93□□□□□ -0.66
MATR3-201ENST00000394805 PHF23Q9BUL5 403 aaPredicted RBP10.93□□□□□ -0.66
MATR3-201ENST00000394805 TERF2IPQ9NYB0 399 aa10.93□□□□□ -0.66
MATR3-201ENST00000394805 ZBTB40Q9NUA8 1239 aa10.92□□□□□ -0.66
MATR3-201ENST00000394805 SPHKAPQ2M3C7 1700 aa10.92□□□□□ -0.66
MATR3-201ENST00000394805 DDX11L8A8MPP1 907 aa10.92□□□□□ -0.66
MATR3-201ENST00000394805 TSPYL6Q8N831 410 aa10.92□□□□□ -0.66
MATR3-201ENST00000394805 CD2BP2O95400 341 aaKnown RBP10.92□□□□□ -0.66
MATR3-201ENST00000394805 ZBTB7CA1YPR0 619 aa10.92□□□□□ -0.66
MATR3-201ENST00000394805 CHD1O14646 1710 aa10.92□□□□□ -0.66
MATR3-201ENST00000394805 HDAC1Q13547 482 aaPredicted RBP10.92□□□□□ -0.66
MATR3-201ENST00000394805 DCTN1Q14203 1278 aa10.92□□□□□ -0.66
MATR3-201ENST00000394805 MRE11P49959 708 aa10.91□□□□□ -0.66
MATR3-201ENST00000394805 HDGFL2Q7Z4V5 671 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 1365.4 ms