RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 GOLGA2Q08379 1002 aa20.24■□□□□ 0.83
UBE2D3-207ENST00000394801 TRMT2AQ8IZ69 625 aaKnown RBP20.23■□□□□ 0.83
UBE2D3-207ENST00000394801 SLFN5Q08AF3 891 aa20.21■□□□□ 0.83
UBE2D3-207ENST00000394801 MORC1Q86VD1 984 aa20.21■□□□□ 0.83
UBE2D3-207ENST00000394801 ANKRD36BQ8N2N9 1353 aa20.21■□□□□ 0.83
UBE2D3-207ENST00000394801 FBXO31Q5XUX0 539 aaPredicted RBP20.2■□□□□ 0.82
UBE2D3-207ENST00000394801 CGNL1Q0VF96 1302 aa20.2■□□□□ 0.82
UBE2D3-207ENST00000394801 BCL11AQ9H165 835 aa20.2■□□□□ 0.82
UBE2D3-207ENST00000394801 TSPOAP1O95153 1857 aa20.19■□□□□ 0.82
UBE2D3-207ENST00000394801 APAF1O14727 1248 aa20.19■□□□□ 0.82
UBE2D3-207ENST00000394801 CCDC146Q8IYE0 955 aa20.19■□□□□ 0.82
UBE2D3-207ENST00000394801 NSD2O96028 1365 aa20.18■□□□□ 0.82
UBE2D3-207ENST00000394801 NINLQ9Y2I6 1382 aa20.18■□□□□ 0.82
UBE2D3-207ENST00000394801 PTPRMP28827 1452 aa20.17■□□□□ 0.82
UBE2D3-207ENST00000394801 PLIN1O60240 522 aa20.16■□□□□ 0.82
UBE2D3-207ENST00000394801 SHPRHQ149N8 1683 aa20.16■□□□□ 0.82
UBE2D3-207ENST00000394801 YTHDC2Q9H6S0 1430 aaKnown RBP20.15■□□□□ 0.82
UBE2D3-207ENST00000394801 CABP2Q9NPB3 220 aa20.15■□□□□ 0.82
UBE2D3-207ENST00000394801 SPATA31D1Q6ZQQ2 1576 aa20.14■□□□□ 0.82
UBE2D3-207ENST00000394801 ALKQ9UM73 1620 aa20.14■□□□□ 0.81
UBE2D3-207ENST00000394801 MSH5O43196 834 aa20.13■□□□□ 0.81
UBE2D3-207ENST00000394801 E9PSI1 815 aa20.13■□□□□ 0.81
UBE2D3-207ENST00000394801 STK26Q9P289 416 aa20.13■□□□□ 0.81
UBE2D3-207ENST00000394801 CLTCQ00610 1675 aaKnown RBP20.12■□□□□ 0.81
UBE2D3-207ENST00000394801 CRBNQ96SW2 442 aa20.12■□□□□ 0.81
UBE2D3-207ENST00000394801 NKTRP30414 1462 aaKnown RBP20.11■□□□□ 0.81
UBE2D3-207ENST00000394801 SPINK5Q9NQ38 1064 aaPredicted RBP20.11■□□□□ 0.81
UBE2D3-207ENST00000394801 ATAD2Q6PL18 1390 aa20.11■□□□□ 0.81
UBE2D3-207ENST00000394801 A2ML1A8K2U0 1454 aa20.1■□□□□ 0.81
UBE2D3-207ENST00000394801 ABCC11Q96J66 1382 aa20.1■□□□□ 0.81
UBE2D3-207ENST00000394801 MTHFSP49914 203 aa20.1■□□□□ 0.81
UBE2D3-207ENST00000394801 SAFB2Q14151 953 aaKnown RBP eCLIP20.09■□□□□ 0.81
UBE2D3-207ENST00000394801 PRAM1Q96QH2 718 aa20.09■□□□□ 0.81
UBE2D3-207ENST00000394801 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.09■□□□□ 0.81
UBE2D3-207ENST00000394801 STAG3Q9UJ98 1225 aa20.09■□□□□ 0.81
UBE2D3-207ENST00000394801 A0A1W2PP64 1363 aa20.09■□□□□ 0.81
UBE2D3-207ENST00000394801 TNNT2P45379 298 aaPredicted RBP20.08■□□□□ 0.81
UBE2D3-207ENST00000394801 RUNDC1Q96C34 613 aa20.08■□□□□ 0.81
UBE2D3-207ENST00000394801 CFAP53Q96M91 514 aa20.08■□□□□ 0.8
UBE2D3-207ENST00000394801 SRPK2P78362 688 aaKnown RBP20.07■□□□□ 0.8
UBE2D3-207ENST00000394801 NCBP3Q53F19 620 aaKnown RBP20.07■□□□□ 0.8
UBE2D3-207ENST00000394801 C20orf194Q5TEA3 1177 aa20.07■□□□□ 0.8
UBE2D3-207ENST00000394801 WWC1Q8IX03 1113 aa20.07■□□□□ 0.8
UBE2D3-207ENST00000394801 ARHGEF40Q8TER5 1519 aa20.07■□□□□ 0.8
UBE2D3-207ENST00000394801 TCERG1O14776 1098 aaKnown RBP20.07■□□□□ 0.8
UBE2D3-207ENST00000394801 PHF23Q9BUL5 403 aaPredicted RBP20.07■□□□□ 0.8
UBE2D3-207ENST00000394801 POGKQ9P215 609 aa20.07■□□□□ 0.8
UBE2D3-207ENST00000394801 DLC1Q96QB1 1528 aa20.06■□□□□ 0.8
UBE2D3-207ENST00000394801 IQSEC2Q5JU85 1478 aa20.06■□□□□ 0.8
UBE2D3-207ENST00000394801 KIF13AQ9H1H9 1805 aa20.05■□□□□ 0.8
UBE2D3-207ENST00000394801 MED14O60244 1454 aa20.05■□□□□ 0.8
UBE2D3-207ENST00000394801 DMRT2Q9Y5R5 561 aa20.05■□□□□ 0.8
UBE2D3-207ENST00000394801 CD163L1Q9NR16 1453 aa20.05■□□□□ 0.8
UBE2D3-207ENST00000394801 TERF2IPQ9NYB0 399 aa20.05■□□□□ 0.8
UBE2D3-207ENST00000394801 MINK1Q8N4C8 1332 aaPredicted RBP20.04■□□□□ 0.8
UBE2D3-207ENST00000394801 RIMS2Q9UQ26 1411 aa20.04■□□□□ 0.8
UBE2D3-207ENST00000394801 SETD1AO15047 1707 aaKnown RBP20.03■□□□□ 0.8
UBE2D3-207ENST00000394801 CCDC27Q2M243 656 aa20.02■□□□□ 0.8
UBE2D3-207ENST00000394801 MS4A1P11836 297 aa20.02■□□□□ 0.8
UBE2D3-207ENST00000394801 TCP11L2Q8N4U5 519 aa20.02■□□□□ 0.8
UBE2D3-207ENST00000394801 SENP3Q9H4L4 574 aaPredicted RBP20.01■□□□□ 0.79
UBE2D3-207ENST00000394801 NLRP1Q9C000 1473 aa20.01■□□□□ 0.79
UBE2D3-207ENST00000394801 WDR63Q8IWG1 891 aa20■□□□□ 0.79
UBE2D3-207ENST00000394801 CDK19Q9BWU1 502 aa20■□□□□ 0.79
UBE2D3-207ENST00000394801 ANKRD26Q9UPS8 1709 aa20■□□□□ 0.79
UBE2D3-207ENST00000394801 FYB1O15117 783 aa20■□□□□ 0.79
UBE2D3-207ENST00000394801 MLECQ14165 292 aa19.99■□□□□ 0.79
UBE2D3-207ENST00000394801 KDM2BQ8NHM5 1336 aa19.99■□□□□ 0.79
UBE2D3-207ENST00000394801 ZMYM3Q14202 1370 aa19.99■□□□□ 0.79
UBE2D3-207ENST00000394801 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.98■□□□□ 0.79
UBE2D3-207ENST00000394801 HDGFL2Q7Z4V5 671 aaPredicted RBP19.97■□□□□ 0.79
UBE2D3-207ENST00000394801 GGNBP2Q9H3C7 697 aa19.97■□□□□ 0.79
UBE2D3-207ENST00000394801 BCAR3O75815 825 aa19.97■□□□□ 0.79
UBE2D3-207ENST00000394801 COL3A1P02461 1466 aaPredicted RBP19.95■□□□□ 0.78
UBE2D3-207ENST00000394801 NRXN3Q9Y4C0 1643 aa19.95■□□□□ 0.78
UBE2D3-207ENST00000394801 ADGRB2O60241 1585 aa19.95■□□□□ 0.78
UBE2D3-207ENST00000394801 CENPQQ7L2Z9 268 aaPredicted RBP19.95■□□□□ 0.78
UBE2D3-207ENST00000394801 CABP1Q9NZU7 370 aa19.95■□□□□ 0.78
UBE2D3-207ENST00000394801 U2AF1L5P0DN76 240 aaPredicted RBP19.94■□□□□ 0.78
UBE2D3-207ENST00000394801 U2AF1Q01081 240 aaKnown RBP eCLIP19.94■□□□□ 0.782e-12■□□□□ 11.1
UBE2D3-207ENST00000394801 PDE3AQ14432 1141 aa19.94■□□□□ 0.78
UBE2D3-207ENST00000394801 RRP7AQ9Y3A4 280 aaKnown RBP19.94■□□□□ 0.78
UBE2D3-207ENST00000394801 NEUROD2Q15784 382 aa19.93■□□□□ 0.78
UBE2D3-207ENST00000394801 ESF1Q9H501 851 aaKnown RBP19.93■□□□□ 0.78
UBE2D3-207ENST00000394801 ATP7BP35670 1465 aa19.93■□□□□ 0.78
UBE2D3-207ENST00000394801 WAPLQ7Z5K2 1190 aa19.93■□□□□ 0.78
UBE2D3-207ENST00000394801 PDE4AP27815 886 aa19.92■□□□□ 0.78
UBE2D3-207ENST00000394801 SIRT1Q96EB6 747 aa19.92■□□□□ 0.78
UBE2D3-207ENST00000394801 BACH2Q9BYV9 841 aa19.92■□□□□ 0.78
UBE2D3-207ENST00000394801 PNPLA6Q8IY17 1366 aa19.92■□□□□ 0.78
UBE2D3-207ENST00000394801 HDGFP51858 240 aaKnown RBP19.91■□□□□ 0.78
UBE2D3-207ENST00000394801 PLEKHF1Q96S99 279 aa19.91■□□□□ 0.78
UBE2D3-207ENST00000394801 ERICH6Q7L0X2 663 aa19.9■□□□□ 0.78
UBE2D3-207ENST00000394801 KIF20BQ96Q89 1820 aa19.9■□□□□ 0.78
UBE2D3-207ENST00000394801 ANP32AP39687 249 aaKnown RBP19.9■□□□□ 0.78
UBE2D3-207ENST00000394801 METP08581 1390 aa19.89■□□□□ 0.77
UBE2D3-207ENST00000394801 TECPR2O15040 1411 aa19.89■□□□□ 0.77
UBE2D3-207ENST00000394801 RARSP54136 660 aaKnown RBP19.88■□□□□ 0.77
UBE2D3-207ENST00000394801 FAM135BQ49AJ0 1406 aa19.88■□□□□ 0.77
UBE2D3-207ENST00000394801 TNRQ92752 1358 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms