RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 SRPK2P78362 688 aaKnown RBP25.75■■□□□ 1.71
CLDND1-203ENST00000394181 TXNDC2Q86VQ3 553 aa25.75■■□□□ 1.71
CLDND1-203ENST00000394181 PUS7Q96PZ0 661 aaKnown RBP25.74■■□□□ 1.71
CLDND1-203ENST00000394181 ABCC11Q96J66 1382 aa25.74■■□□□ 1.71
CLDND1-203ENST00000394181 NPC1L1Q9UHC9 1359 aa25.73■■□□□ 1.71
CLDND1-203ENST00000394181 NSD3Q9BZ95 1437 aa25.72■■□□□ 1.71
CLDND1-203ENST00000394181 ZBED9Q6R2W3 1325 aa25.71■■□□□ 1.71
CLDND1-203ENST00000394181 CDK19Q9BWU1 502 aa25.71■■□□□ 1.71
CLDND1-203ENST00000394181 ADAMTS13Q76LX8 1427 aa25.71■■□□□ 1.71
CLDND1-203ENST00000394181 DLC1Q96QB1 1528 aa25.69■■□□□ 1.7
CLDND1-203ENST00000394181 SLC26A8Q96RN1 970 aa25.69■■□□□ 1.7
CLDND1-203ENST00000394181 RIMS1Q86UR5 1692 aaKnown RBP25.68■■□□□ 1.7
CLDND1-203ENST00000394181 PLEKHG1Q9ULL1 1385 aa25.67■■□□□ 1.7
CLDND1-203ENST00000394181 EID1Q9Y6B2 187 aa25.66■■□□□ 1.7
CLDND1-203ENST00000394181 THEMISQ8N1K5 641 aaPredicted RBP25.65■■□□□ 1.7
CLDND1-203ENST00000394181 ARHGAP23Q9P227 1491 aa25.65■■□□□ 1.7
CLDND1-203ENST00000394181 ANKRD36BQ8N2N9 1353 aa25.64■■□□□ 1.7
CLDND1-203ENST00000394181 SLIT1O75093 1534 aa25.64■■□□□ 1.69
CLDND1-203ENST00000394181 A0A1W2PP64 1363 aa25.61■■□□□ 1.69
CLDND1-203ENST00000394181 ATAD2Q6PL18 1390 aa25.61■■□□□ 1.69
CLDND1-203ENST00000394181 ROBO2Q9HCK4 1378 aa25.61■■□□□ 1.69
CLDND1-203ENST00000394181 TNNT2P45379 298 aaPredicted RBP25.61■■□□□ 1.69
CLDND1-203ENST00000394181 CABP1Q9NZU7 370 aa25.61■■□□□ 1.69
CLDND1-203ENST00000394181 MED14O60244 1454 aa25.6■■□□□ 1.69
CLDND1-203ENST00000394181 ADAMTSL3P82987 1691 aa25.6■■□□□ 1.69
CLDND1-203ENST00000394181 TECPR2O15040 1411 aa25.6■■□□□ 1.69
CLDND1-203ENST00000394181 ADAMTS8Q9UP79 889 aa25.59■■□□□ 1.69
CLDND1-203ENST00000394181 MORC1Q86VD1 984 aa25.58■■□□□ 1.69
CLDND1-203ENST00000394181 PTPRUQ92729 1446 aa25.58■■□□□ 1.69
CLDND1-203ENST00000394181 CD163L1Q9NR16 1453 aa25.58■■□□□ 1.69
CLDND1-203ENST00000394181 CGNL1Q0VF96 1302 aa25.58■■□□□ 1.68
CLDND1-203ENST00000394181 SIRT1Q96EB6 747 aa25.57■■□□□ 1.68
CLDND1-203ENST00000394181 SALL2Q9Y467 1007 aaPredicted RBP25.57■■□□□ 1.68
CLDND1-203ENST00000394181 WASLO00401 505 aaPredicted RBP25.56■■□□□ 1.68
CLDND1-203ENST00000394181 SUPT16HQ9Y5B9 1047 aaKnown RBP25.56■■□□□ 1.68
CLDND1-203ENST00000394181 FAM135BQ49AJ0 1406 aa25.56■■□□□ 1.68
CLDND1-203ENST00000394181 CEP170BQ9Y4F5 1589 aaPredicted RBP25.55■■□□□ 1.68
CLDND1-203ENST00000394181 NINLQ9Y2I6 1382 aa25.55■■□□□ 1.68
CLDND1-203ENST00000394181 NCKAP5LQ9HCH0 1330 aa25.54■■□□□ 1.68
CLDND1-203ENST00000394181 CPS1P31327 1500 aa25.54■■□□□ 1.68
CLDND1-203ENST00000394181 KNDC1Q76NI1 1749 aa25.54■■□□□ 1.68
CLDND1-203ENST00000394181 TERF2IPQ9NYB0 399 aa25.53■■□□□ 1.68
CLDND1-203ENST00000394181 TBX22Q9Y458 520 aa25.53■■□□□ 1.68
CLDND1-203ENST00000394181 FKBP8Q14318 412 aa25.52■■□□□ 1.68
CLDND1-203ENST00000394181 AMOTL2Q9Y2J4 779 aa25.52■■□□□ 1.68
CLDND1-203ENST00000394181 USP32Q8NFA0 1604 aa25.51■■□□□ 1.67
CLDND1-203ENST00000394181 BLMP54132 1417 aaPredicted RBP25.5■■□□□ 1.67
CLDND1-203ENST00000394181 WDR43Q15061 677 aaKnown RBP eCLIP25.49■■□□□ 1.67
CLDND1-203ENST00000394181 GGNBP2Q9H3C7 697 aa25.49■■□□□ 1.67
CLDND1-203ENST00000394181 NUDT16Q96DE0 195 aaKnown RBP25.48■■□□□ 1.67
CLDND1-203ENST00000394181 FYB1O15117 783 aa25.48■■□□□ 1.67
CLDND1-203ENST00000394181 HDGFL2Q7Z4V5 671 aaPredicted RBP25.48■■□□□ 1.67
CLDND1-203ENST00000394181 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.46■■□□□ 1.67
CLDND1-203ENST00000394181 PRR36Q9H6K5 1346 aa25.45■■□□□ 1.66
CLDND1-203ENST00000394181 MTHFSP49914 203 aa25.45■■□□□ 1.66
CLDND1-203ENST00000394181 INSRP06213 1382 aa25.44■■□□□ 1.66
CLDND1-203ENST00000394181 PPIP5K1Q6PFW1 1433 aa25.44■■□□□ 1.66
CLDND1-203ENST00000394181 NUTM2FA1L443 756 aa25.44■■□□□ 1.66
CLDND1-203ENST00000394181 NSD2O96028 1365 aa25.43■■□□□ 1.66
CLDND1-203ENST00000394181 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.43■■□□□ 1.66
CLDND1-203ENST00000394181 SMG6Q86US8 1419 aaKnown RBP25.43■■□□□ 1.66
CLDND1-203ENST00000394181 ANKLE2Q86XL3 938 aa25.42■■□□□ 1.66
CLDND1-203ENST00000394181 CCDC146Q8IYE0 955 aa25.42■■□□□ 1.66
CLDND1-203ENST00000394181 CCDC61Q9Y6R9 512 aa25.42■■□□□ 1.66
CLDND1-203ENST00000394181 POLR3AO14802 1390 aaPredicted RBP25.41■■□□□ 1.66
CLDND1-203ENST00000394181 NUDCQ9Y266 331 aa25.41■■□□□ 1.66
CLDND1-203ENST00000394181 IRX6P78412 446 aaPredicted RBP25.41■■□□□ 1.66
CLDND1-203ENST00000394181 ATP7BP35670 1465 aa25.39■■□□□ 1.66
CLDND1-203ENST00000394181 NEFLP07196 543 aa25.39■■□□□ 1.65
CLDND1-203ENST00000394181 KCNA6P17658 529 aa25.39■■□□□ 1.65
CLDND1-203ENST00000394181 CPSF1Q10570 1443 aaKnown RBP25.39■■□□□ 1.65
CLDND1-203ENST00000394181 CDCA7LQ96GN5 454 aa25.38■■□□□ 1.65
CLDND1-203ENST00000394181 ZNF142P52746 1687 aaPredicted RBP25.38■■□□□ 1.65
CLDND1-203ENST00000394181 DIP2AQ14689 1571 aa25.37■■□□□ 1.65
CLDND1-203ENST00000394181 SETD1BQ9UPS6 1966 aaKnown RBP25.36■■□□□ 1.65
CLDND1-203ENST00000394181 FBLN1P23142 703 aa25.35■■□□□ 1.65
CLDND1-203ENST00000394181 PTCH1Q13635 1447 aa25.35■■□□□ 1.65
CLDND1-203ENST00000394181 ZRANB1Q9UGI0 708 aa25.34■■□□□ 1.65
CLDND1-203ENST00000394181 ADGRB2O60241 1585 aa25.34■■□□□ 1.65
CLDND1-203ENST00000394181 NME9Q86XW9 330 aa25.32■■□□□ 1.64
CLDND1-203ENST00000394181 XRN1Q8IZH2 1706 aaKnown RBP25.32■■□□□ 1.64
CLDND1-203ENST00000394181 APAF1O14727 1248 aa25.31■■□□□ 1.64
CLDND1-203ENST00000394181 RBM33Q96EV2 1170 aaKnown RBP25.31■■□□□ 1.64
CLDND1-203ENST00000394181 SHPRHQ149N8 1683 aa25.31■■□□□ 1.64
CLDND1-203ENST00000394181 CDC42BPGQ6DT37 1551 aa25.3■■□□□ 1.64
CLDND1-203ENST00000394181 EDC4Q6P2E9 1401 aaKnown RBP25.29■■□□□ 1.64
CLDND1-203ENST00000394181 CFAP53Q96M91 514 aa25.28■■□□□ 1.64
CLDND1-203ENST00000394181 ACEP12821 1306 aa25.28■■□□□ 1.64
CLDND1-203ENST00000394181 PIK3R4Q99570 1358 aa25.28■■□□□ 1.64
CLDND1-203ENST00000394181 PDE3BQ13370 1112 aa25.27■■□□□ 1.64
CLDND1-203ENST00000394181 ANKRD26Q9UPS8 1709 aa25.27■■□□□ 1.64
CLDND1-203ENST00000394181 KIF20BQ96Q89 1820 aa25.27■■□□□ 1.64
CLDND1-203ENST00000394181 PLEKHG3A1L390 1219 aa25.26■■□□□ 1.63
CLDND1-203ENST00000394181 NKTRP30414 1462 aaKnown RBP25.26■■□□□ 1.63
CLDND1-203ENST00000394181 PMFBP1Q8TBY8 1022 aa25.25■■□□□ 1.63
CLDND1-203ENST00000394181 ZNF521Q96K83 1311 aa25.24■■□□□ 1.63
CLDND1-203ENST00000394181 ZNF692Q9BU19 519 aaPredicted RBP25.24■■□□□ 1.63
CLDND1-203ENST00000394181 NPHP4O75161 1426 aaPredicted RBP25.23■■□□□ 1.63
CLDND1-203ENST00000394181 TOPAZ1Q8N9V7 1692 aa25.22■■□□□ 1.63
CLDND1-203ENST00000394181 POLKQ9UBT6 870 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms