RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 RRP1P56182 461 aaKnown RBP9.55□□□□□ -0.88
SMAD1-202ENST00000394092 RBM19Q9Y4C8 960 aaKnown RBP9.55□□□□□ -0.88
SMAD1-202ENST00000394092 TSPOAP1O95153 1857 aa9.54□□□□□ -0.88
SMAD1-202ENST00000394092 TMEM131LA2VDJ0 1609 aa9.54□□□□□ -0.88
SMAD1-202ENST00000394092 B4GALNT3Q6L9W6 998 aa9.54□□□□□ -0.88
SMAD1-202ENST00000394092 PUS7Q96PZ0 661 aaKnown RBP9.54□□□□□ -0.88
SMAD1-202ENST00000394092 RCAN3Q9UKA8 241 aa9.54□□□□□ -0.88
SMAD1-202ENST00000394092 CCDC136Q96JN2 1154 aa9.53□□□□□ -0.88
SMAD1-202ENST00000394092 NGEFQ8N5V2 710 aa9.52□□□□□ -0.89
SMAD1-202ENST00000394092 POLA2Q14181 598 aa9.51□□□□□ -0.89
SMAD1-202ENST00000394092 NINLQ9Y2I6 1382 aa9.51□□□□□ -0.89
SMAD1-202ENST00000394092 CLTCQ00610 1675 aaKnown RBP9.51□□□□□ -0.89
SMAD1-202ENST00000394092 NSD2O96028 1365 aa9.51□□□□□ -0.89
SMAD1-202ENST00000394092 EVC2Q86UK5 1308 aa9.51□□□□□ -0.89
SMAD1-202ENST00000394092 CYB5RLQ6IPT4 315 aa9.51□□□□□ -0.89
SMAD1-202ENST00000394092 ADAMTS8Q9UP79 889 aa9.51□□□□□ -0.89
SMAD1-202ENST00000394092 TRAK1Q9UPV9 953 aa9.51□□□□□ -0.89
SMAD1-202ENST00000394092 NSD3Q9BZ95 1437 aa9.5□□□□□ -0.89
SMAD1-202ENST00000394092 POLR3AO14802 1390 aaPredicted RBP9.5□□□□□ -0.89
SMAD1-202ENST00000394092 SALL2Q9Y467 1007 aaPredicted RBP9.5□□□□□ -0.89
SMAD1-202ENST00000394092 ARHGEF40Q8TER5 1519 aa9.5□□□□□ -0.89
SMAD1-202ENST00000394092 TULP4Q9NRJ4 1543 aa9.5□□□□□ -0.89
SMAD1-202ENST00000394092 FANCIQ9NVI1 1328 aa9.49□□□□□ -0.89
SMAD1-202ENST00000394092 ANKRD26Q9UPS8 1709 aa9.49□□□□□ -0.89
SMAD1-202ENST00000394092 SHPRHQ149N8 1683 aa9.49□□□□□ -0.89
SMAD1-202ENST00000394092 FAM69CQ0P6D2 419 aa9.48□□□□□ -0.89
SMAD1-202ENST00000394092 SPATA31D1Q6ZQQ2 1576 aa9.48□□□□□ -0.89
SMAD1-202ENST00000394092 ANKRD36BQ8N2N9 1353 aa9.48□□□□□ -0.89
SMAD1-202ENST00000394092 SENP3-EIF4A1A0A087X0R7 540 aa9.48□□□□□ -0.89
SMAD1-202ENST00000394092 IDI1Q13907 227 aa9.48□□□□□ -0.89
SMAD1-202ENST00000394092 KIF13AQ9H1H9 1805 aa9.48□□□□□ -0.89
SMAD1-202ENST00000394092 CGNL1Q0VF96 1302 aa9.47□□□□□ -0.89
SMAD1-202ENST00000394092 HAX1O00165 279 aa9.47□□□□□ -0.89
SMAD1-202ENST00000394092 GOLGA2Q08379 1002 aa9.47□□□□□ -0.89
SMAD1-202ENST00000394092 AKT1S1Q96B36 256 aa9.47□□□□□ -0.89
SMAD1-202ENST00000394092 CARD14Q9BXL6 1004 aa9.47□□□□□ -0.89
SMAD1-202ENST00000394092 ZNF521Q96K83 1311 aa9.46□□□□□ -0.89
SMAD1-202ENST00000394092 PIP4P2Q8N4L2 257 aa9.46□□□□□ -0.89
SMAD1-202ENST00000394092 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.46□□□□□ -0.89
SMAD1-202ENST00000394092 CDCA7LQ96GN5 454 aa9.46□□□□□ -0.89
SMAD1-202ENST00000394092 ATAD2Q6PL18 1390 aa9.46□□□□□ -0.9
SMAD1-202ENST00000394092 PLEKHH1Q9ULM0 1364 aa9.46□□□□□ -0.9
SMAD1-202ENST00000394092 PTPRMP28827 1452 aa9.46□□□□□ -0.9
SMAD1-202ENST00000394092 ALKQ9UM73 1620 aa9.45□□□□□ -0.9
SMAD1-202ENST00000394092 TMEM132EQ6IEE7 984 aa9.45□□□□□ -0.9
SMAD1-202ENST00000394092 MORC1Q86VD1 984 aa9.45□□□□□ -0.9
SMAD1-202ENST00000394092 DLC1Q96QB1 1528 aa9.45□□□□□ -0.9
SMAD1-202ENST00000394092 CFAP53Q96M91 514 aa9.45□□□□□ -0.9
SMAD1-202ENST00000394092 YTHDC2Q9H6S0 1430 aaKnown RBP9.45□□□□□ -0.9
SMAD1-202ENST00000394092 KIF20BQ96Q89 1820 aa9.44□□□□□ -0.9
SMAD1-202ENST00000394092 DUSP27Q5VZP5 1158 aa9.44□□□□□ -0.9
SMAD1-202ENST00000394092 NKTRP30414 1462 aaKnown RBP9.44□□□□□ -0.9
SMAD1-202ENST00000394092 SETD1AO15047 1707 aaKnown RBP9.44□□□□□ -0.9
SMAD1-202ENST00000394092 ANP32EQ9BTT0 268 aa9.43□□□□□ -0.9
SMAD1-202ENST00000394092 STAG3Q9UJ98 1225 aa9.43□□□□□ -0.9
SMAD1-202ENST00000394092 MED14O60244 1454 aa9.43□□□□□ -0.9
SMAD1-202ENST00000394092 KNDC1Q76NI1 1749 aa9.42□□□□□ -0.9
SMAD1-202ENST00000394092 E9PSI1 815 aa9.42□□□□□ -0.9
SMAD1-202ENST00000394092 EXOC6Q8TAG9 804 aa9.42□□□□□ -0.9
SMAD1-202ENST00000394092 SLC12A5Q9H2X9 1139 aa9.42□□□□□ -0.9
SMAD1-202ENST00000394092 ABCC11Q96J66 1382 aa9.42□□□□□ -0.9
SMAD1-202ENST00000394092 A2ML1A8K2U0 1454 aa9.42□□□□□ -0.9
SMAD1-202ENST00000394092 SLFN5Q08AF3 891 aa9.42□□□□□ -0.9
SMAD1-202ENST00000394092 NUTM2DQ5VT03 806 aaPredicted RBP9.42□□□□□ -0.9
SMAD1-202ENST00000394092 IQSEC2Q5JU85 1478 aa9.42□□□□□ -0.9
SMAD1-202ENST00000394092 APAF1O14727 1248 aa9.41□□□□□ -0.9
SMAD1-202ENST00000394092 CCDC146Q8IYE0 955 aa9.41□□□□□ -0.9
SMAD1-202ENST00000394092 TCERG1O14776 1098 aaKnown RBP9.4□□□□□ -0.9
SMAD1-202ENST00000394092 SRPK2P78362 688 aaKnown RBP9.4□□□□□ -0.9
SMAD1-202ENST00000394092 ERICH6Q7L0X2 663 aa9.4□□□□□ -0.9
SMAD1-202ENST00000394092 TRMT2AQ8IZ69 625 aaKnown RBP9.4□□□□□ -0.9
SMAD1-202ENST00000394092 TERF2IPQ9NYB0 399 aa9.4□□□□□ -0.9
SMAD1-202ENST00000394092 POGKQ9P215 609 aa9.4□□□□□ -0.9
SMAD1-202ENST00000394092 RIMS2Q9UQ26 1411 aa9.4□□□□□ -0.9
SMAD1-202ENST00000394092 ADGRB2O60241 1585 aa9.4□□□□□ -0.91
SMAD1-202ENST00000394092 A0A1W2PP64 1363 aa9.39□□□□□ -0.91
SMAD1-202ENST00000394092 RUNDC1Q96C34 613 aa9.39□□□□□ -0.91
SMAD1-202ENST00000394092 ESF1Q9H501 851 aaKnown RBP9.39□□□□□ -0.91
SMAD1-202ENST00000394092 ATP7BP35670 1465 aa9.39□□□□□ -0.91
SMAD1-202ENST00000394092 REM2Q8IYK8 340 aaPredicted RBP9.39□□□□□ -0.91
SMAD1-202ENST00000394092 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.39□□□□□ -0.91
SMAD1-202ENST00000394092 CABP2Q9NPB3 220 aa9.39□□□□□ -0.91
SMAD1-202ENST00000394092 STK26Q9P289 416 aa9.39□□□□□ -0.91
SMAD1-202ENST00000394092 MS4A1P11836 297 aa9.38□□□□□ -0.91
SMAD1-202ENST00000394092 FBXO31Q5XUX0 539 aaPredicted RBP9.38□□□□□ -0.91
SMAD1-202ENST00000394092 HDGFL2Q7Z4V5 671 aaPredicted RBP9.38□□□□□ -0.91
SMAD1-202ENST00000394092 PRAM1Q96QH2 718 aa9.38□□□□□ -0.91
SMAD1-202ENST00000394092 CRBNQ96SW2 442 aa9.38□□□□□ -0.91
SMAD1-202ENST00000394092 NRXN3Q9Y4C0 1643 aa9.38□□□□□ -0.91
SMAD1-202ENST00000394092 ANP32AP39687 249 aaKnown RBP9.37□□□□□ -0.91
SMAD1-202ENST00000394092 HDGFP51858 240 aaKnown RBP9.37□□□□□ -0.91
SMAD1-202ENST00000394092 CD163L1Q9NR16 1453 aa9.36□□□□□ -0.91
SMAD1-202ENST00000394092 PLIN1O60240 522 aa9.36□□□□□ -0.91
SMAD1-202ENST00000394092 TNNT2P45379 298 aaPredicted RBP9.36□□□□□ -0.91
SMAD1-202ENST00000394092 MTHFSP49914 203 aa9.36□□□□□ -0.91
SMAD1-202ENST00000394092 SAFB2Q14151 953 aaKnown RBP eCLIP9.36□□□□□ -0.91
SMAD1-202ENST00000394092 CCDC27Q2M243 656 aa9.36□□□□□ -0.91
SMAD1-202ENST00000394092 MINK1Q8N4C8 1332 aaPredicted RBP9.36□□□□□ -0.91
SMAD1-202ENST00000394092 ITSN1Q15811 1721 aa9.36□□□□□ -0.91
SMAD1-202ENST00000394092 UBR1Q8IWV7 1749 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms