RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 CCDC27Q2M243 656 aa28.86■■■□□ 2.21
RARA-202ENST00000394081 RUNDC1Q96C34 613 aa28.86■■■□□ 2.21
RARA-202ENST00000394081 SBNO2Q9Y2G9 1366 aa28.85■■■□□ 2.21
RARA-202ENST00000394081 SHROOM2Q13796 1616 aa28.85■■■□□ 2.21
RARA-202ENST00000394081 TRAK2O60296 914 aa28.85■■■□□ 2.21
RARA-202ENST00000394081 RRP9O43818 475 aaKnown RBP28.83■■■□□ 2.21
RARA-202ENST00000394081 MYO3AQ8NEV4 1616 aa28.83■■■□□ 2.21
RARA-202ENST00000394081 MYOM2P54296 1465 aa28.82■■■□□ 2.2
RARA-202ENST00000394081 CARD14Q9BXL6 1004 aa28.82■■■□□ 2.2
RARA-202ENST00000394081 C22orf23Q9BZE7 217 aa28.82■■■□□ 2.2
RARA-202ENST00000394081 RLBP1P12271 317 aa28.81■■■□□ 2.2
RARA-202ENST00000394081 NAP1L5Q96NT1 182 aaPredicted RBP28.81■■■□□ 2.2
RARA-202ENST00000394081 TET3O43151 1660 aa28.8■■■□□ 2.2
RARA-202ENST00000394081 NCOA3Q9Y6Q9 1424 aa28.8■■■□□ 2.2
RARA-202ENST00000394081 DEPDC5O75140 1603 aa28.79■■■□□ 2.2
RARA-202ENST00000394081 CT47B1P0C2W7 299 aaPredicted RBP28.78■■■□□ 2.2
RARA-202ENST00000394081 PANK2Q9BZ23 570 aa28.78■■■□□ 2.2
RARA-202ENST00000394081 MAP3K4Q9Y6R4 1608 aa28.78■■■□□ 2.2
RARA-202ENST00000394081 MVPQ14764 893 aaKnown RBP28.78■■■□□ 2.2
RARA-202ENST00000394081 HSP90AA1P07900 732 aaKnown RBP28.77■■■□□ 2.2
RARA-202ENST00000394081 MYH16Q9H6N6 1097 aa28.76■■■□□ 2.19
RARA-202ENST00000394081 GRPEL1Q9HAV7 217 aa28.76■■■□□ 2.19
RARA-202ENST00000394081 ABCC1P33527 1531 aa28.75■■■□□ 2.19
RARA-202ENST00000394081 OSCARQ8IYS5 282 aa28.75■■■□□ 2.19
RARA-202ENST00000394081 USP32Q8NFA0 1604 aa28.75■■■□□ 2.19
RARA-202ENST00000394081 PLCH2O75038 1416 aa28.74■■■□□ 2.19
RARA-202ENST00000394081 PTMSP20962 102 aa28.74■■■□□ 2.19
RARA-202ENST00000394081 HSCBQ8IWL3 235 aa28.74■■■□□ 2.19
RARA-202ENST00000394081 TCP11L2Q8N4U5 519 aa28.74■■■□□ 2.19
RARA-202ENST00000394081 ZNF692Q9BU19 519 aaPredicted RBP28.74■■■□□ 2.19
RARA-202ENST00000394081 ADGRL1O94910 1474 aa28.74■■■□□ 2.19
RARA-202ENST00000394081 HDAC1Q13547 482 aaPredicted RBP28.73■■■□□ 2.19
RARA-202ENST00000394081 ABCA6Q8N139 1617 aa28.73■■■□□ 2.19
RARA-202ENST00000394081 DDIT3P35638 169 aa28.73■■■□□ 2.19
RARA-202ENST00000394081 CIZ1Q9ULV3 898 aaPredicted RBP28.73■■■□□ 2.19
RARA-202ENST00000394081 HSP90AA2PQ14568 343 aaPredicted RBP28.72■■■□□ 2.19
RARA-202ENST00000394081 GZF1Q9H116 711 aaPredicted RBP28.72■■■□□ 2.19
RARA-202ENST00000394081 SNX21Q969T3 373 aa28.72■■■□□ 2.19
RARA-202ENST00000394081 ESPNB1AK53 854 aa28.71■■■□□ 2.19
RARA-202ENST00000394081 ZKSCAN2Q63HK3 967 aa28.71■■■□□ 2.19
RARA-202ENST00000394081 VWDEQ8N2E2 1590 aa28.7■■■□□ 2.18
RARA-202ENST00000394081 ZNF518AQ6AHZ1 1483 aa28.68■■■□□ 2.18
RARA-202ENST00000394081 SKOR2Q2VWA4 1001 aaPredicted RBP28.67■■■□□ 2.18
RARA-202ENST00000394081 MORC1Q86VD1 984 aa28.67■■■□□ 2.18
RARA-202ENST00000394081 DZIP1LQ8IYY4 767 aaKnown RBP28.67■■■□□ 2.18
RARA-202ENST00000394081 TNNQ9UQP3 1299 aa28.67■■■□□ 2.18
RARA-202ENST00000394081 RBM25P49756 843 aaKnown RBP28.67■■■□□ 2.18
RARA-202ENST00000394081 EFCAB2Q5VUJ9 269 aa28.67■■■□□ 2.18
RARA-202ENST00000394081 MFAP1P55081 439 aaKnown RBP28.66■■■□□ 2.18
RARA-202ENST00000394081 IFT172Q9UG01 1749 aa28.66■■■□□ 2.18
RARA-202ENST00000394081 NRXN1Q9ULB1 1477 aa28.66■■■□□ 2.18
RARA-202ENST00000394081 ADGRB2O60241 1585 aa28.66■■■□□ 2.18
RARA-202ENST00000394081 NSD3Q9BZ95 1437 aa28.65■■■□□ 2.18
RARA-202ENST00000394081 SMC5Q8IY18 1101 aa28.65■■■□□ 2.18
RARA-202ENST00000394081 SPRYD3Q8NCJ5 442 aa28.65■■■□□ 2.18
RARA-202ENST00000394081 ARXQ96QS3 562 aa28.65■■■□□ 2.18
RARA-202ENST00000394081 SETBP1Q9Y6X0 1596 aa28.65■■■□□ 2.18
RARA-202ENST00000394081 FTSJ3Q8IY81 847 aaKnown RBP28.64■■■□□ 2.18
RARA-202ENST00000394081 PKNOX2Q96KN3 472 aa28.63■■■□□ 2.17
RARA-202ENST00000394081 CFAP53Q96M91 514 aa28.63■■■□□ 2.17
RARA-202ENST00000394081 GBP4Q96PP9 640 aa28.63■■■□□ 2.17
RARA-202ENST00000394081 NEUROD2Q15784 382 aa28.62■■■□□ 2.17
RARA-202ENST00000394081 DDX19BQ9UMR2 479 aa28.62■■■□□ 2.17
RARA-202ENST00000394081 ZFYVE16Q7Z3T8 1539 aa28.62■■■□□ 2.17
RARA-202ENST00000394081 TRAPPC8Q9Y2L5 1435 aa28.62■■■□□ 2.17
RARA-202ENST00000394081 RRP7AQ9Y3A4 280 aaKnown RBP28.62■■■□□ 2.17
RARA-202ENST00000394081 CFAP70Q5T0N1 1121 aa28.6■■■□□ 2.17
RARA-202ENST00000394081 TPM2P07951 284 aa28.6■■■□□ 2.17
RARA-202ENST00000394081 TRIM44Q96DX7 344 aaPredicted RBP28.6■■■□□ 2.17
RARA-202ENST00000394081 BCL2L13Q9BXK5 485 aa28.6■■■□□ 2.17
RARA-202ENST00000394081 ARAP3Q8WWN8 1544 aa28.59■■■□□ 2.17
RARA-202ENST00000394081 KIF1BO60333 1816 aa28.59■■■□□ 2.17
RARA-202ENST00000394081 ZC3H13Q5T200 1668 aaKnown RBP28.58■■■□□ 2.17
RARA-202ENST00000394081 SPAG9O60271 1321 aaKnown RBP28.57■■■□□ 2.16
RARA-202ENST00000394081 NSD2O96028 1365 aa28.56■■■□□ 2.16
RARA-202ENST00000394081 RAB3GAP1Q15042 981 aa28.56■■■□□ 2.16
RARA-202ENST00000394081 INO80Q9ULG1 1556 aaPredicted RBP28.56■■■□□ 2.16
RARA-202ENST00000394081 TNPO1Q92973 898 aaKnown RBP28.55■■■□□ 2.16
RARA-202ENST00000394081 ERBB4Q15303 1308 aa28.54■■■□□ 2.16
RARA-202ENST00000394081 ADGRF5Q8IZF2 1346 aa28.53■■■□□ 2.16
RARA-202ENST00000394081 IBTKQ9P2D0 1353 aaPredicted RBP28.53■■■□□ 2.16
RARA-202ENST00000394081 TRIM27P14373 513 aa28.51■■■□□ 2.15
RARA-202ENST00000394081 MTHFSP49914 203 aa28.51■■■□□ 2.15
RARA-202ENST00000394081 PUS7Q96PZ0 661 aaKnown RBP28.51■■■□□ 2.15
RARA-202ENST00000394081 ATF7IPQ6VMQ6 1270 aa28.5■■■□□ 2.15
RARA-202ENST00000394081 KIF16BQ96L93 1317 aa28.5■■■□□ 2.15
RARA-202ENST00000394081 ABCC11Q96J66 1382 aa28.49■■■□□ 2.15
RARA-202ENST00000394081 CCDC173Q0VFZ6 552 aa28.49■■■□□ 2.15
RARA-202ENST00000394081 CLEC17AQ6ZS10 378 aa28.49■■■□□ 2.15
RARA-202ENST00000394081 VSIG10Q8N0Z9 540 aa28.49■■■□□ 2.15
RARA-202ENST00000394081 SMC4Q9NTJ3 1288 aa28.49■■■□□ 2.15
RARA-202ENST00000394081 IL16Q14005 1332 aa28.49■■■□□ 2.15
RARA-202ENST00000394081 QRICH2Q9H0J4 1663 aa28.48■■■□□ 2.15
RARA-202ENST00000394081 NUCB1Q02818 461 aa28.48■■■□□ 2.15
RARA-202ENST00000394081 PPP1R9BQ96SB3 815 aa28.48■■■□□ 2.15
RARA-202ENST00000394081 ZMYND15Q9H091 742 aa28.48■■■□□ 2.15
RARA-202ENST00000394081 HSP90AB1P08238 724 aaKnown RBP28.47■■■□□ 2.15
RARA-202ENST00000394081 ZBTB40Q9NUA8 1239 aa28.47■■■□□ 2.15
RARA-202ENST00000394081 GAS2L3Q86XJ1 694 aa28.46■■■□□ 2.15
RARA-202ENST00000394081 ARHGAP31Q2M1Z3 1444 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms