RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 ARHGAP5Q13017 1502 aa10.6□□□□□ -0.71
GABRA1-202ENST00000393943 URB2Q14146 1524 aaKnown RBP10.6□□□□□ -0.71
GABRA1-202ENST00000393943 ASXL1Q8IXJ9 1541 aa10.6□□□□□ -0.71
GABRA1-202ENST00000393943 GOLGA6L4A6NEF3 574 aa10.6□□□□□ -0.71
GABRA1-202ENST00000393943 KDM5CP41229 1560 aa10.59□□□□□ -0.71
GABRA1-202ENST00000393943 RRP7AQ9Y3A4 280 aaKnown RBP10.59□□□□□ -0.71
GABRA1-202ENST00000393943 SCAF11Q99590 1463 aaKnown RBP10.59□□□□□ -0.71
GABRA1-202ENST00000393943 TBC1D2Q9BYX2 928 aa10.59□□□□□ -0.71
GABRA1-202ENST00000393943 POLR1AO95602 1720 aaPredicted RBP10.59□□□□□ -0.71
GABRA1-202ENST00000393943 K7ELQ4 463 aaPredicted RBP10.59□□□□□ -0.71
GABRA1-202ENST00000393943 WWC1Q8IX03 1113 aa10.59□□□□□ -0.71
GABRA1-202ENST00000393943 BCL2L13Q9BXK5 485 aa10.59□□□□□ -0.71
GABRA1-202ENST00000393943 MCM5P33992 734 aa10.58□□□□□ -0.72
GABRA1-202ENST00000393943 ABCC11Q96J66 1382 aa10.58□□□□□ -0.72
GABRA1-202ENST00000393943 LETM1O95202 739 aaPredicted RBP10.58□□□□□ -0.72
GABRA1-202ENST00000393943 PLCB2Q00722 1185 aa10.57□□□□□ -0.72
GABRA1-202ENST00000393943 KIF3BO15066 747 aa10.57□□□□□ -0.72
GABRA1-202ENST00000393943 KIAA1211Q6ZU35 1233 aa10.57□□□□□ -0.72
GABRA1-202ENST00000393943 RARSP54136 660 aaKnown RBP10.57□□□□□ -0.72
GABRA1-202ENST00000393943 DIAPH3Q9NSV4 1193 aa10.56□□□□□ -0.72
GABRA1-202ENST00000393943 VGFO15240 615 aaPredicted RBP10.56□□□□□ -0.72
GABRA1-202ENST00000393943 ATF7IPQ6VMQ6 1270 aa10.56□□□□□ -0.72
GABRA1-202ENST00000393943 NUP153P49790 1475 aaKnown RBP10.56□□□□□ -0.72
GABRA1-202ENST00000393943 PER1O15534 1290 aaPredicted RBP10.56□□□□□ -0.72
GABRA1-202ENST00000393943 GNAI1P63096 354 aa10.56□□□□□ -0.72
GABRA1-202ENST00000393943 FAM13BQ9NYF5 915 aa10.56□□□□□ -0.72
GABRA1-202ENST00000393943 NCBP3Q53F19 620 aaKnown RBP10.55□□□□□ -0.72
GABRA1-202ENST00000393943 ESF1Q9H501 851 aaKnown RBP10.55□□□□□ -0.72
GABRA1-202ENST00000393943 HDAC5Q9UQL6 1122 aa10.55□□□□□ -0.72
GABRA1-202ENST00000393943 DISP3Q9P2K9 1392 aa10.55□□□□□ -0.72
GABRA1-202ENST00000393943 NSD2O96028 1365 aa10.55□□□□□ -0.72
GABRA1-202ENST00000393943 MBD5Q9P267 1494 aa10.55□□□□□ -0.72
GABRA1-202ENST00000393943 HS1BP3Q53T59 392 aa10.55□□□□□ -0.72
GABRA1-202ENST00000393943 SNX21Q969T3 373 aa10.55□□□□□ -0.72
GABRA1-202ENST00000393943 DIAPH1O60610 1272 aaKnown RBP10.55□□□□□ -0.72
GABRA1-202ENST00000393943 KIAA0556O60303 1618 aa10.55□□□□□ -0.72
GABRA1-202ENST00000393943 GRIN2AQ12879 1464 aa10.55□□□□□ -0.72
GABRA1-202ENST00000393943 LNPKQ9C0E8 428 aa10.54□□□□□ -0.72
GABRA1-202ENST00000393943 FOXD4L1Q9NU39 408 aa10.54□□□□□ -0.72
GABRA1-202ENST00000393943 MCTP1Q6DN14 999 aa10.54□□□□□ -0.72
GABRA1-202ENST00000393943 DRC7Q8IY82 874 aa10.54□□□□□ -0.72
GABRA1-202ENST00000393943 FAM135AQ9P2D6 1515 aa10.54□□□□□ -0.72
GABRA1-202ENST00000393943 KDM5BQ9UGL1 1544 aa10.54□□□□□ -0.72
GABRA1-202ENST00000393943 ADAMTS12P58397 1594 aa10.54□□□□□ -0.72
GABRA1-202ENST00000393943 CCDC27Q2M243 656 aa10.54□□□□□ -0.72
GABRA1-202ENST00000393943 FAM184AQ8NB25 1140 aa10.54□□□□□ -0.72
GABRA1-202ENST00000393943 R3HCC1Q9Y3T6 440 aaKnown RBP10.54□□□□□ -0.72
GABRA1-202ENST00000393943 XRCC6P12956 609 aaKnown RBP eCLIP10.53□□□□□ -0.72
GABRA1-202ENST00000393943 RIPK4P57078 832 aa10.53□□□□□ -0.72
GABRA1-202ENST00000393943 HDAC1Q13547 482 aaPredicted RBP10.53□□□□□ -0.72
GABRA1-202ENST00000393943 TERF1P54274 439 aa10.53□□□□□ -0.72
GABRA1-202ENST00000393943 CHD1LQ86WJ1 897 aa10.53□□□□□ -0.72
GABRA1-202ENST00000393943 POLR3AO14802 1390 aaPredicted RBP10.53□□□□□ -0.72
GABRA1-202ENST00000393943 MTHFSP49914 203 aa10.52□□□□□ -0.72
GABRA1-202ENST00000393943 ALDH1L2Q3SY69 923 aa10.52□□□□□ -0.72
GABRA1-202ENST00000393943 TRAK1Q9UPV9 953 aa10.52□□□□□ -0.72
GABRA1-202ENST00000393943 AMER1Q5JTC6 1135 aaPredicted RBP10.52□□□□□ -0.73
GABRA1-202ENST00000393943 IL16Q14005 1332 aa10.51□□□□□ -0.73
GABRA1-202ENST00000393943 HDGFP51858 240 aaKnown RBP10.51□□□□□ -0.73
GABRA1-202ENST00000393943 KLHL40Q2TBA0 621 aa10.51□□□□□ -0.73
GABRA1-202ENST00000393943 RTF1Q92541 710 aaKnown RBP10.51□□□□□ -0.73
GABRA1-202ENST00000393943 TESK2Q96S53 571 aa10.51□□□□□ -0.73
GABRA1-202ENST00000393943 STK31Q9BXU1 1019 aa10.51□□□□□ -0.73
GABRA1-202ENST00000393943 MAGI3Q5TCQ9 1506 aa10.51□□□□□ -0.73
GABRA1-202ENST00000393943 IGHDP01880 384 aa10.51□□□□□ -0.73
GABRA1-202ENST00000393943 BMP2KLQ5H9B9 411 aa10.51□□□□□ -0.73
GABRA1-202ENST00000393943 CAVIN1Q6NZI2 390 aaKnown RBP10.51□□□□□ -0.73
GABRA1-202ENST00000393943 RPGRIP1LQ68CZ1 1315 aa10.51□□□□□ -0.73
GABRA1-202ENST00000393943 KCNJ4P48050 445 aa10.5□□□□□ -0.73
GABRA1-202ENST00000393943 TSPY26PQ9H489 355 aa10.5□□□□□ -0.73
GABRA1-202ENST00000393943 PLEKHH1Q9ULM0 1364 aa10.5□□□□□ -0.73
GABRA1-202ENST00000393943 PDIA4P13667 645 aaKnown RBP10.5□□□□□ -0.73
GABRA1-202ENST00000393943 EXOSC9Q06265 439 aaKnown RBP10.5□□□□□ -0.73
GABRA1-202ENST00000393943 CHMP4CQ96CF2 233 aa10.5□□□□□ -0.73
GABRA1-202ENST00000393943 DUOX2Q9NRD8 1548 aa10.5□□□□□ -0.73
GABRA1-202ENST00000393943 GPATCH3Q96I76 525 aa10.49□□□□□ -0.73
GABRA1-202ENST00000393943 ABCC2Q92887 1545 aa10.49□□□□□ -0.73
GABRA1-202ENST00000393943 PLB1Q6P1J6 1458 aa10.49□□□□□ -0.73
GABRA1-202ENST00000393943 SMC5Q8IY18 1101 aa10.49□□□□□ -0.73
GABRA1-202ENST00000393943 TNPO1Q92973 898 aaKnown RBP10.49□□□□□ -0.73
GABRA1-202ENST00000393943 DYNC1I1O14576 645 aa10.48□□□□□ -0.73
GABRA1-202ENST00000393943 SASS6Q6UVJ0 657 aa10.48□□□□□ -0.73
GABRA1-202ENST00000393943 TPM4P67936 248 aa10.48□□□□□ -0.73
GABRA1-202ENST00000393943 OS9Q13438 667 aaPredicted RBP10.48□□□□□ -0.73
GABRA1-202ENST00000393943 TAF3Q5VWG9 929 aa10.48□□□□□ -0.73
GABRA1-202ENST00000393943 SKAP1Q86WV1 359 aa10.48□□□□□ -0.73
GABRA1-202ENST00000393943 NSD3Q9BZ95 1437 aa10.48□□□□□ -0.73
GABRA1-202ENST00000393943 KDM5DQ9BY66 1539 aa10.48□□□□□ -0.73
GABRA1-202ENST00000393943 NOB1Q9ULX3 412 aaKnown RBP10.48□□□□□ -0.73
GABRA1-202ENST00000393943 KIF3AQ9Y496 699 aa10.48□□□□□ -0.73
GABRA1-202ENST00000393943 UQCRHLA0A096LP55 91 aa10.47□□□□□ -0.73
GABRA1-202ENST00000393943 UQCRHP07919 91 aa10.47□□□□□ -0.73
GABRA1-202ENST00000393943 KDM6BO15054 1643 aa10.47□□□□□ -0.73
GABRA1-202ENST00000393943 TRIM6-TRIM34B2RNG4 842 aa10.47□□□□□ -0.73
GABRA1-202ENST00000393943 CFAP70Q5T0N1 1121 aa10.46□□□□□ -0.73
GABRA1-202ENST00000393943 RUFY2Q8WXA3 655 aa10.46□□□□□ -0.73
GABRA1-202ENST00000393943 PUS7Q96PZ0 661 aaKnown RBP10.46□□□□□ -0.73
GABRA1-202ENST00000393943 ARHGEF5Q12774 1597 aa10.46□□□□□ -0.73
GABRA1-202ENST00000393943 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.45□□□□□ -0.74
GABRA1-202ENST00000393943 PRPF40AO75400 957 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms