RNA–Protein interactions for RNA: ENST00000393888.1

CNP-201, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

TSL 1 (best) BASIC

Gene CNP, Length 2,583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-201ENST00000393888 PLXNC1O60486 1568 aa20.82■□□□□ 0.92
CNP-201ENST00000393888 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.82■□□□□ 0.92
CNP-201ENST00000393888 DUOX2Q9NRD8 1548 aa20.81■□□□□ 0.92
CNP-201ENST00000393888 NGEFQ8N5V2 710 aa20.81■□□□□ 0.92
CNP-201ENST00000393888 CEP152O94986 1710 aa20.8■□□□□ 0.92
CNP-201ENST00000393888 RUNDC1Q96C34 613 aa20.8■□□□□ 0.92
CNP-201ENST00000393888 MORC1Q86VD1 984 aa20.8■□□□□ 0.92
CNP-201ENST00000393888 ERVK-7P63135 1459 aa20.78■□□□□ 0.92
CNP-201ENST00000393888 SCAPERQ9BY12 1400 aa20.78■□□□□ 0.92
CNP-201ENST00000393888 SPHKAPQ2M3C7 1700 aa20.78■□□□□ 0.92
CNP-201ENST00000393888 HSP90AA1P07900 732 aaKnown RBP20.78■□□□□ 0.92
CNP-201ENST00000393888 GRPEL1Q9HAV7 217 aa20.78■□□□□ 0.92
CNP-201ENST00000393888 POLR3AO14802 1390 aaPredicted RBP20.78■□□□□ 0.92
CNP-201ENST00000393888 MRE11P49959 708 aa20.77■□□□□ 0.92
CNP-201ENST00000393888 MVPQ14764 893 aaKnown RBP20.77■□□□□ 0.92
CNP-201ENST00000393888 VSIG10Q8N0Z9 540 aa20.77■□□□□ 0.92
CNP-201ENST00000393888 RTEL1-TNFRSF6BF6WH68 1400 aa20.77■□□□□ 0.92
CNP-201ENST00000393888 FTSJ3Q8IY81 847 aaKnown RBP20.77■□□□□ 0.91
CNP-201ENST00000393888 ERBB4Q15303 1308 aa20.76■□□□□ 0.91
CNP-201ENST00000393888 HSP90AA2PQ14568 343 aaPredicted RBP20.76■□□□□ 0.91
CNP-201ENST00000393888 MYH16Q9H6N6 1097 aa20.76■□□□□ 0.91
CNP-201ENST00000393888 HSCBQ8IWL3 235 aa20.75■□□□□ 0.91
CNP-201ENST00000393888 TSR2Q969E8 191 aaKnown RBP20.74■□□□□ 0.91
CNP-201ENST00000393888 ADGRF5Q8IZF2 1346 aa20.74■□□□□ 0.91
CNP-201ENST00000393888 CLTCL1P53675 1640 aa20.74■□□□□ 0.91
CNP-201ENST00000393888 AAMPQ13685 434 aa20.73■□□□□ 0.91
CNP-201ENST00000393888 DZIP1LQ8IYY4 767 aaKnown RBP20.73■□□□□ 0.91
CNP-201ENST00000393888 ZNF692Q9BU19 519 aaPredicted RBP20.73■□□□□ 0.91
CNP-201ENST00000393888 SLC12A5Q9H2X9 1139 aa20.73■□□□□ 0.91
CNP-201ENST00000393888 WDR63Q8IWG1 891 aa20.73■□□□□ 0.91
CNP-201ENST00000393888 PKNOX2Q96KN3 472 aa20.73■□□□□ 0.91
CNP-201ENST00000393888 SHPRHQ149N8 1683 aa20.72■□□□□ 0.91
CNP-201ENST00000393888 MTHFSP49914 203 aa20.72■□□□□ 0.91
CNP-201ENST00000393888 GLIPR1L2Q4G1C9 344 aa20.72■□□□□ 0.91
CNP-201ENST00000393888 ZKSCAN2Q63HK3 967 aa20.72■□□□□ 0.91
CNP-201ENST00000393888 NSD3Q9BZ95 1437 aa20.72■□□□□ 0.91
CNP-201ENST00000393888 ESPNB1AK53 854 aa20.72■□□□□ 0.91
CNP-201ENST00000393888 FOXD4L1Q9NU39 408 aa20.72■□□□□ 0.91
CNP-201ENST00000393888 GAS2L3Q86XJ1 694 aa20.71■□□□□ 0.91
CNP-201ENST00000393888 ZMYM3Q14202 1370 aa20.71■□□□□ 0.91
CNP-201ENST00000393888 PHF23Q9BUL5 403 aaPredicted RBP20.71■□□□□ 0.91
CNP-201ENST00000393888 ITPRIPQ8IWB1 547 aa20.7■□□□□ 0.9
CNP-201ENST00000393888 TRPM2O94759 1503 aa20.69■□□□□ 0.9
CNP-201ENST00000393888 TRAPPC8Q9Y2L5 1435 aa20.69■□□□□ 0.9
CNP-201ENST00000393888 DDX11L8A8MPP1 907 aa20.69■□□□□ 0.9
CNP-201ENST00000393888 TNPO1Q92973 898 aaKnown RBP20.69■□□□□ 0.9
CNP-201ENST00000393888 FAM69CQ0P6D2 419 aa20.69■□□□□ 0.9
CNP-201ENST00000393888 AFAP1Q8N556 730 aa20.69■□□□□ 0.9
CNP-201ENST00000393888 SMC4Q9NTJ3 1288 aa20.69■□□□□ 0.9
CNP-201ENST00000393888 IQSEC2Q5JU85 1478 aa20.68■□□□□ 0.9
CNP-201ENST00000393888 ZMYND15Q9H091 742 aa20.68■□□□□ 0.9
CNP-201ENST00000393888 U2AF1L5P0DN76 240 aaPredicted RBP20.67■□□□□ 0.9
CNP-201ENST00000393888 U2AF1Q01081 240 aaKnown RBP eCLIP20.67■□□□□ 0.9
CNP-201ENST00000393888 TRIM27P14373 513 aa20.67■□□□□ 0.9
CNP-201ENST00000393888 TRIM44Q96DX7 344 aaPredicted RBP20.67■□□□□ 0.9
CNP-201ENST00000393888 TRAK1Q9UPV9 953 aa20.67■□□□□ 0.9
CNP-201ENST00000393888 PLCH2O75038 1416 aa20.66■□□□□ 0.9
CNP-201ENST00000393888 EXOSC9Q06265 439 aaKnown RBP20.66■□□□□ 0.9
CNP-201ENST00000393888 UGGT1Q9NYU2 1555 aa20.65■□□□□ 0.9
CNP-201ENST00000393888 RRP9O43818 475 aaKnown RBP20.64■□□□□ 0.9
CNP-201ENST00000393888 STAC3Q96MF2 364 aa20.64■□□□□ 0.9
CNP-201ENST00000393888 SPAG9O60271 1321 aaKnown RBP20.64■□□□□ 0.89
CNP-201ENST00000393888 HSP90AB1P08238 724 aaKnown RBP20.64■□□□□ 0.89
CNP-201ENST00000393888 LNPKQ9C0E8 428 aa20.64■□□□□ 0.89
CNP-201ENST00000393888 ABCA9Q8IUA7 1624 aa20.64■□□□□ 0.89
CNP-201ENST00000393888 PTPRTO14522 1441 aa20.64■□□□□ 0.89
CNP-201ENST00000393888 DDIT3P35638 169 aa20.63■□□□□ 0.89
CNP-201ENST00000393888 EFCAB2Q5VUJ9 269 aa20.63■□□□□ 0.89
CNP-201ENST00000393888 SSH1Q8WYL5 1049 aa20.63■□□□□ 0.89
CNP-201ENST00000393888 CD109Q6YHK3 1445 aa20.63■□□□□ 0.89
CNP-201ENST00000393888 NOB1Q9ULX3 412 aaKnown RBP20.62■□□□□ 0.89
CNP-201ENST00000393888 ABCA6Q8N139 1617 aa20.62■□□□□ 0.89
CNP-201ENST00000393888 HDAC1Q13547 482 aaPredicted RBP20.62■□□□□ 0.89
CNP-201ENST00000393888 CCDC27Q2M243 656 aa20.61■□□□□ 0.89
CNP-201ENST00000393888 TMEM57Q8N5G2 664 aa20.61■□□□□ 0.89
CNP-201ENST00000393888 CFAP53Q96M91 514 aa20.61■□□□□ 0.89
CNP-201ENST00000393888 CD2BP2O95400 341 aaKnown RBP20.61■□□□□ 0.89
CNP-201ENST00000393888 CHGAP10645 457 aaKnown RBP20.61■□□□□ 0.89
CNP-201ENST00000393888 KIF3BO15066 747 aa20.59■□□□□ 0.89
CNP-201ENST00000393888 DDX19BQ9UMR2 479 aa20.59■□□□□ 0.89
CNP-201ENST00000393888 SLC24A1O60721 1099 aa20.59■□□□□ 0.89
CNP-201ENST00000393888 SMC5Q8IY18 1101 aa20.59■□□□□ 0.89
CNP-201ENST00000393888 NCOA3Q9Y6Q9 1424 aa20.59■□□□□ 0.89
CNP-201ENST00000393888 TMEM132EQ6IEE7 984 aa20.58■□□□□ 0.89
CNP-201ENST00000393888 ATF7IPQ6VMQ6 1270 aa20.58■□□□□ 0.89
CNP-201ENST00000393888 RBM42Q9BTD8 480 aaKnown RBP20.58■□□□□ 0.89
CNP-201ENST00000393888 ZNF518AQ6AHZ1 1483 aa20.58■□□□□ 0.89
CNP-201ENST00000393888 FANCAO15360 1455 aa20.58■□□□□ 0.88
CNP-201ENST00000393888 U2SURPO15042 1029 aaKnown RBP20.58■□□□□ 0.88
CNP-201ENST00000393888 RBM25P49756 843 aaKnown RBP20.58■□□□□ 0.88
CNP-201ENST00000393888 KIAA1210Q9ULL0 1709 aa20.58■□□□□ 0.88
CNP-201ENST00000393888 MAP3K4Q9Y6R4 1608 aa20.57■□□□□ 0.88
CNP-201ENST00000393888 GBP4Q96PP9 640 aa20.57■□□□□ 0.88
CNP-201ENST00000393888 DIP2BQ9P265 1576 aa20.57■□□□□ 0.88
CNP-201ENST00000393888 RAB3GAP1Q15042 981 aa20.56■□□□□ 0.88
CNP-201ENST00000393888 KANK1Q14678 1352 aa20.56■□□□□ 0.88
CNP-201ENST00000393888 SNX21Q969T3 373 aa20.56■□□□□ 0.88
CNP-201ENST00000393888 KIF2CQ99661 725 aa20.55■□□□□ 0.88
CNP-201ENST00000393888 SSFA2P28290 1259 aa20.54■□□□□ 0.88
CNP-201ENST00000393888 ZBTB40Q9NUA8 1239 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms