RNA–Protein interactions for RNA: ENST00000393540.7

CCDC110-202, Transcript of coiled-coil domain containing 110, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC110, Length 2,722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-202ENST00000393540 ZMYM3Q14202 1370 aa5.17□□□□□ -1.58
CCDC110-202ENST00000393540 TRAK1Q9UPV9 953 aa5.17□□□□□ -1.58
CCDC110-202ENST00000393540 EIF3AQ14152 1382 aaKnown RBP5.16□□□□□ -1.58
CCDC110-202ENST00000393540 DMRT2Q9Y5R5 561 aa5.16□□□□□ -1.58
CCDC110-202ENST00000393540 UBR1Q8IWV7 1749 aa5.16□□□□□ -1.58
CCDC110-202ENST00000393540 CC2D1BQ5T0F9 858 aaKnown RBP5.16□□□□□ -1.58
CCDC110-202ENST00000393540 ZBED9Q6R2W3 1325 aa5.16□□□□□ -1.58
CCDC110-202ENST00000393540 CENPJQ9HC77 1338 aaPredicted RBP5.16□□□□□ -1.58
CCDC110-202ENST00000393540 LRP5O75197 1615 aa5.15□□□□□ -1.58
CCDC110-202ENST00000393540 VGFO15240 615 aaPredicted RBP5.15□□□□□ -1.58
CCDC110-202ENST00000393540 PIP4K2BP78356 416 aa5.15□□□□□ -1.58
CCDC110-202ENST00000393540 C3P01024 1663 aa5.15□□□□□ -1.59
CCDC110-202ENST00000393540 NPC1L1Q9UHC9 1359 aa5.15□□□□□ -1.59
CCDC110-202ENST00000393540 NCKAP5LQ9HCH0 1330 aa5.15□□□□□ -1.59
CCDC110-202ENST00000393540 RIMS2Q9UQ26 1411 aa5.15□□□□□ -1.59
CCDC110-202ENST00000393540 USP32Q8NFA0 1604 aa5.14□□□□□ -1.59
CCDC110-202ENST00000393540 SENP3-EIF4A1A0A087X0R7 540 aa5.14□□□□□ -1.59
CCDC110-202ENST00000393540 ZNF335Q9H4Z2 1342 aaPredicted RBP5.14□□□□□ -1.59
CCDC110-202ENST00000393540 YTHDC2Q9H6S0 1430 aaKnown RBP5.14□□□□□ -1.59
CCDC110-202ENST00000393540 UBAP1LF5GYI3 381 aa5.14□□□□□ -1.59
CCDC110-202ENST00000393540 PPP2R1AP30153 589 aa5.14□□□□□ -1.59
CCDC110-202ENST00000393540 BLMP54132 1417 aaPredicted RBP5.14□□□□□ -1.59
CCDC110-202ENST00000393540 CD163L1Q9NR16 1453 aa5.14□□□□□ -1.59
CCDC110-202ENST00000393540 NLRP13Q86W25 1043 aa5.13□□□□□ -1.59
CCDC110-202ENST00000393540 SLC12A5Q9H2X9 1139 aa5.13□□□□□ -1.59
CCDC110-202ENST00000393540 STRCQ7RTU9 1775 aa5.13□□□□□ -1.59
CCDC110-202ENST00000393540 DLC1Q96QB1 1528 aa5.13□□□□□ -1.59
CCDC110-202ENST00000393540 TMC1Q8TDI8 760 aa5.13□□□□□ -1.59
CCDC110-202ENST00000393540 FER1L4A9Z1Z3 1794 aa5.13□□□□□ -1.59
CCDC110-202ENST00000393540 SHPRHQ149N8 1683 aa5.13□□□□□ -1.59
CCDC110-202ENST00000393540 SMG6Q86US8 1419 aaKnown RBP5.12□□□□□ -1.59
CCDC110-202ENST00000393540 METP08581 1390 aa5.12□□□□□ -1.59
CCDC110-202ENST00000393540 TNRQ92752 1358 aa5.12□□□□□ -1.59
CCDC110-202ENST00000393540 PLEKHH1Q9ULM0 1364 aa5.12□□□□□ -1.59
CCDC110-202ENST00000393540 CDCA8Q53HL2 280 aa5.12□□□□□ -1.59
CCDC110-202ENST00000393540 KNDC1Q76NI1 1749 aa5.12□□□□□ -1.59
CCDC110-202ENST00000393540 INSRP06213 1382 aa5.12□□□□□ -1.59
CCDC110-202ENST00000393540 PUS7Q96PZ0 661 aaKnown RBP5.12□□□□□ -1.59
CCDC110-202ENST00000393540 STK26Q9P289 416 aa5.12□□□□□ -1.59
CCDC110-202ENST00000393540 ADAMTS13Q76LX8 1427 aa5.12□□□□□ -1.59
CCDC110-202ENST00000393540 FKBP8Q14318 412 aa5.11□□□□□ -1.59
CCDC110-202ENST00000393540 CABP2Q9NPB3 220 aa5.11□□□□□ -1.59
CCDC110-202ENST00000393540 KNSTRNQ9Y448 316 aa5.11□□□□□ -1.59
CCDC110-202ENST00000393540 NLRP1Q9C000 1473 aa5.11□□□□□ -1.59
CCDC110-202ENST00000393540 NSD3Q9BZ95 1437 aa5.11□□□□□ -1.59
CCDC110-202ENST00000393540 PRAM1Q96QH2 718 aa5.11□□□□□ -1.59
CCDC110-202ENST00000393540 TMEM2Q9UHN6 1383 aa5.11□□□□□ -1.59
CCDC110-202ENST00000393540 RNF123Q5XPI4 1314 aa5.11□□□□□ -1.59
CCDC110-202ENST00000393540 LTKP29376 864 aa5.1□□□□□ -1.59
CCDC110-202ENST00000393540 HSPA1LP34931 641 aa5.1□□□□□ -1.59
CCDC110-202ENST00000393540 SAFB2Q14151 953 aaKnown RBP eCLIP5.1□□□□□ -1.59
CCDC110-202ENST00000393540 ARHGAP23Q9P227 1491 aa5.1□□□□□ -1.59
CCDC110-202ENST00000393540 ABCC11Q96J66 1382 aa5.1□□□□□ -1.59
CCDC110-202ENST00000393540 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.1□□□□□ -1.59
CCDC110-202ENST00000393540 LHX8Q68G74 356 aa5.1□□□□□ -1.59
CCDC110-202ENST00000393540 WAPLQ7Z5K2 1190 aa5.1□□□□□ -1.59
CCDC110-202ENST00000393540 ESF1Q9H501 851 aaKnown RBP5.1□□□□□ -1.59
CCDC110-202ENST00000393540 ADAMTS8Q9UP79 889 aa5.1□□□□□ -1.59
CCDC110-202ENST00000393540 TECPR2O15040 1411 aa5.1□□□□□ -1.59
CCDC110-202ENST00000393540 PTPRUQ92729 1446 aa5.1□□□□□ -1.59
CCDC110-202ENST00000393540 ANKRD26Q9UPS8 1709 aa5.1□□□□□ -1.59
CCDC110-202ENST00000393540 SLIT1O75093 1534 aa5.1□□□□□ -1.59
CCDC110-202ENST00000393540 CPS1P31327 1500 aa5.1□□□□□ -1.59
CCDC110-202ENST00000393540 EVC2Q86UK5 1308 aa5.1□□□□□ -1.59
CCDC110-202ENST00000393540 SLC24A1O60721 1099 aa5.1□□□□□ -1.59
CCDC110-202ENST00000393540 A0A1W2PP64 1363 aa5.09□□□□□ -1.59
CCDC110-202ENST00000393540 ANKRD36BQ8N2N9 1353 aa5.09□□□□□ -1.59
CCDC110-202ENST00000393540 MINK1Q8N4C8 1332 aaPredicted RBP5.09□□□□□ -1.59
CCDC110-202ENST00000393540 SETD1BQ9UPS6 1966 aaKnown RBP5.09□□□□□ -1.59
CCDC110-202ENST00000393540 ZNF521Q96K83 1311 aa5.09□□□□□ -1.59
CCDC110-202ENST00000393540 IRX6P78412 446 aaPredicted RBP5.09□□□□□ -1.6
CCDC110-202ENST00000393540 DLL1O00548 723 aa5.08□□□□□ -1.6
CCDC110-202ENST00000393540 CDCA7LQ96GN5 454 aa5.08□□□□□ -1.6
CCDC110-202ENST00000393540 BCANQ96GW7 911 aa5.08□□□□□ -1.6
CCDC110-202ENST00000393540 CDK19Q9BWU1 502 aa5.08□□□□□ -1.6
CCDC110-202ENST00000393540 STAG3Q9UJ98 1225 aa5.08□□□□□ -1.6
CCDC110-202ENST00000393540 NUDCQ9Y266 331 aa5.08□□□□□ -1.6
CCDC110-202ENST00000393540 ROBO2Q9HCK4 1378 aa5.08□□□□□ -1.6
CCDC110-202ENST00000393540 PLEKHG1Q9ULL1 1385 aa5.08□□□□□ -1.6
CCDC110-202ENST00000393540 KIF20BQ96Q89 1820 aa5.08□□□□□ -1.6
CCDC110-202ENST00000393540 POLR3AO14802 1390 aaPredicted RBP5.08□□□□□ -1.6
CCDC110-202ENST00000393540 COL3A1P02461 1466 aaPredicted RBP5.08□□□□□ -1.6
CCDC110-202ENST00000393540 TOPAZ1Q8N9V7 1692 aa5.08□□□□□ -1.6
CCDC110-202ENST00000393540 AKAP12Q02952 1782 aa5.07□□□□□ -1.6
CCDC110-202ENST00000393540 FAM135BQ49AJ0 1406 aa5.07□□□□□ -1.6
CCDC110-202ENST00000393540 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.07□□□□□ -1.6
CCDC110-202ENST00000393540 ADGRB2O60241 1585 aa5.07□□□□□ -1.6
CCDC110-202ENST00000393540 MON2Q7Z3U7 1717 aa5.07□□□□□ -1.6
CCDC110-202ENST00000393540 CPSF1Q10570 1443 aaKnown RBP5.07□□□□□ -1.6
CCDC110-202ENST00000393540 AATKQ6ZMQ8 1374 aa5.07□□□□□ -1.6
CCDC110-202ENST00000393540 NINLQ9Y2I6 1382 aa5.07□□□□□ -1.6
CCDC110-202ENST00000393540 TXNDC2Q86VQ3 553 aa5.07□□□□□ -1.6
CCDC110-202ENST00000393540 SIRT1Q96EB6 747 aa5.07□□□□□ -1.6
CCDC110-202ENST00000393540 XRN1Q8IZH2 1706 aaKnown RBP5.06□□□□□ -1.6
CCDC110-202ENST00000393540 FYB1O15117 783 aa5.06□□□□□ -1.6
CCDC110-202ENST00000393540 ZNF142P52746 1687 aaPredicted RBP5.06□□□□□ -1.6
CCDC110-202ENST00000393540 PRR36Q9H6K5 1346 aa5.06□□□□□ -1.6
CCDC110-202ENST00000393540 ATAD2Q6PL18 1390 aa5.06□□□□□ -1.6
CCDC110-202ENST00000393540 RBM33Q96EV2 1170 aaKnown RBP5.06□□□□□ -1.6
CCDC110-202ENST00000393540 CABP1Q9NZU7 370 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms