RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 HSP90AB1P08238 724 aaKnown RBP18.39■□□□□ 0.54
SFXN3-202ENST00000393459 HSCBQ8IWL3 235 aa18.39■□□□□ 0.54
SFXN3-202ENST00000393459 RBM42Q9BTD8 480 aaKnown RBP18.39■□□□□ 0.54
SFXN3-202ENST00000393459 PRAG1Q86YV5 1406 aa18.39■□□□□ 0.53
SFXN3-202ENST00000393459 ZNF521Q96K83 1311 aa18.39■□□□□ 0.53
SFXN3-202ENST00000393459 SCAPERQ9BY12 1400 aa18.39■□□□□ 0.53
SFXN3-202ENST00000393459 TCP11L2Q8N4U5 519 aa18.38■□□□□ 0.53
SFXN3-202ENST00000393459 ATP7AQ04656 1500 aa18.37■□□□□ 0.53
SFXN3-202ENST00000393459 RARSP54136 660 aaKnown RBP18.36■□□□□ 0.53
SFXN3-202ENST00000393459 C1orf115Q9H7X2 142 aa18.36■□□□□ 0.53
SFXN3-202ENST00000393459 U2SURPO15042 1029 aaKnown RBP18.36■□□□□ 0.53
SFXN3-202ENST00000393459 CFAP70Q5T0N1 1121 aa18.36■□□□□ 0.53
SFXN3-202ENST00000393459 FAM13BQ9NYF5 915 aa18.36■□□□□ 0.53
SFXN3-202ENST00000393459 ATP10AO60312 1499 aa18.36■□□□□ 0.53
SFXN3-202ENST00000393459 NKTRP30414 1462 aaKnown RBP18.36■□□□□ 0.53
SFXN3-202ENST00000393459 INO80Q9ULG1 1556 aaPredicted RBP18.36■□□□□ 0.53
SFXN3-202ENST00000393459 CHAMP1Q96JM3 812 aa18.36■□□□□ 0.53
SFXN3-202ENST00000393459 CHMP5Q9NZZ3 219 aa18.36■□□□□ 0.53
SFXN3-202ENST00000393459 CLCN1P35523 988 aa18.35■□□□□ 0.53
SFXN3-202ENST00000393459 U2AF1L5P0DN76 240 aaPredicted RBP18.34■□□□□ 0.53
SFXN3-202ENST00000393459 U2AF1Q01081 240 aaKnown RBP eCLIP18.34■□□□□ 0.53
SFXN3-202ENST00000393459 MORC1Q86VD1 984 aa18.34■□□□□ 0.53
SFXN3-202ENST00000393459 PLA2R1Q13018 1463 aa18.34■□□□□ 0.53
SFXN3-202ENST00000393459 CARD14Q9BXL6 1004 aa18.34■□□□□ 0.53
SFXN3-202ENST00000393459 SMC4Q9NTJ3 1288 aa18.34■□□□□ 0.53
SFXN3-202ENST00000393459 LAMC1P11047 1609 aa18.34■□□□□ 0.53
SFXN3-202ENST00000393459 APBB1O00213 710 aa18.34■□□□□ 0.53
SFXN3-202ENST00000393459 ELL2O00472 640 aaPredicted RBP18.34■□□□□ 0.53
SFXN3-202ENST00000393459 TRPM1Q7Z4N2 1603 aa18.33■□□□□ 0.53
SFXN3-202ENST00000393459 FOXD4L6Q3SYB3 417 aaPredicted RBP18.33■□□□□ 0.53
SFXN3-202ENST00000393459 FOXD4L3Q6VB84 417 aaPredicted RBP18.33■□□□□ 0.53
SFXN3-202ENST00000393459 RWDD1Q9H446 243 aaPredicted RBP18.33■□□□□ 0.53
SFXN3-202ENST00000393459 PMFBP1Q8TBY8 1022 aa18.33■□□□□ 0.52
SFXN3-202ENST00000393459 CD109Q6YHK3 1445 aa18.32■□□□□ 0.52
SFXN3-202ENST00000393459 TNPO1Q92973 898 aaKnown RBP18.32■□□□□ 0.52
SFXN3-202ENST00000393459 SLC12A5Q9H2X9 1139 aa18.32■□□□□ 0.52
SFXN3-202ENST00000393459 CFAP74Q9C0B2 1584 aa18.32■□□□□ 0.52
SFXN3-202ENST00000393459 KIAA1211Q6ZU35 1233 aa18.32■□□□□ 0.52
SFXN3-202ENST00000393459 TRAK1Q9UPV9 953 aa18.32■□□□□ 0.52
SFXN3-202ENST00000393459 MRE11P49959 708 aa18.31■□□□□ 0.52
SFXN3-202ENST00000393459 EIF3AQ14152 1382 aaKnown RBP18.31■□□□□ 0.52
SFXN3-202ENST00000393459 CD2BP2O95400 341 aaKnown RBP18.31■□□□□ 0.52
SFXN3-202ENST00000393459 COL17A1Q9UMD9 1497 aaPredicted RBP18.31■□□□□ 0.52
SFXN3-202ENST00000393459 PDE3AQ14432 1141 aa18.31■□□□□ 0.52
SFXN3-202ENST00000393459 ZNF518AQ6AHZ1 1483 aa18.3■□□□□ 0.52
SFXN3-202ENST00000393459 KANK1Q14678 1352 aa18.3■□□□□ 0.52
SFXN3-202ENST00000393459 A2MP01023 1474 aa18.3■□□□□ 0.52
SFXN3-202ENST00000393459 DEPDC5O75140 1603 aa18.29■□□□□ 0.52
SFXN3-202ENST00000393459 FSD2A1L4K1 749 aa18.29■□□□□ 0.52
SFXN3-202ENST00000393459 MTHFSP49914 203 aa18.28■□□□□ 0.52
SFXN3-202ENST00000393459 R3HCC1Q9Y3T6 440 aaKnown RBP18.28■□□□□ 0.52
SFXN3-202ENST00000393459 PRDM10Q9NQV6 1147 aa18.28■□□□□ 0.52
SFXN3-202ENST00000393459 EIF2AK4Q9P2K8 1649 aaKnown RBP18.28■□□□□ 0.52
SFXN3-202ENST00000393459 SSFA2P28290 1259 aa18.27■□□□□ 0.52
SFXN3-202ENST00000393459 A0A0U1RQG5 324 aaPredicted RBP18.27■□□□□ 0.52
SFXN3-202ENST00000393459 TMEM132EQ6IEE7 984 aa18.27■□□□□ 0.52
SFXN3-202ENST00000393459 EXOSC9Q06265 439 aaKnown RBP18.26■□□□□ 0.51
SFXN3-202ENST00000393459 TRMT2AQ8IZ69 625 aaKnown RBP18.26■□□□□ 0.51
SFXN3-202ENST00000393459 DDX49Q9Y6V7 483 aaKnown RBP18.26■□□□□ 0.51
SFXN3-202ENST00000393459 KIF3BO15066 747 aa18.25■□□□□ 0.51
SFXN3-202ENST00000393459 DZIP1LQ8IYY4 767 aaKnown RBP18.25■□□□□ 0.51
SFXN3-202ENST00000393459 XPCQ01831 940 aaPredicted RBP18.24■□□□□ 0.51
SFXN3-202ENST00000393459 ANKRD45Q5TZF3 282 aa18.24■□□□□ 0.51
SFXN3-202ENST00000393459 RRP9O43818 475 aaKnown RBP18.24■□□□□ 0.51
SFXN3-202ENST00000393459 FBLN1P23142 703 aa18.23■□□□□ 0.51
SFXN3-202ENST00000393459 NOL8Q76FK4 1167 aaKnown RBP18.23■□□□□ 0.51
SFXN3-202ENST00000393459 POGZQ7Z3K3 1410 aa18.23■□□□□ 0.51
SFXN3-202ENST00000393459 TET3O43151 1660 aa18.23■□□□□ 0.51
SFXN3-202ENST00000393459 VWDEQ8N2E2 1590 aa18.23■□□□□ 0.51
SFXN3-202ENST00000393459 RNF214Q8ND24 703 aa18.23■□□□□ 0.51
SFXN3-202ENST00000393459 KIDINS220Q9ULH0 1771 aa18.22■□□□□ 0.51
SFXN3-202ENST00000393459 GPRASP1Q5JY77 1395 aa18.22■□□□□ 0.51
SFXN3-202ENST00000393459 MVPQ14764 893 aaKnown RBP18.22■□□□□ 0.51
SFXN3-202ENST00000393459 JARID2Q92833 1246 aaPredicted RBP18.22■□□□□ 0.51
SFXN3-202ENST00000393459 NOB1Q9ULX3 412 aaKnown RBP18.22■□□□□ 0.51
SFXN3-202ENST00000393459 NEO1Q92859 1461 aa18.22■□□□□ 0.51
SFXN3-202ENST00000393459 PRDM15P57071 1507 aaPredicted RBP18.22■□□□□ 0.51
SFXN3-202ENST00000393459 TRIM27P14373 513 aa18.21■□□□□ 0.51
SFXN3-202ENST00000393459 NASPP49321 788 aaPredicted RBP18.21■□□□□ 0.51
SFXN3-202ENST00000393459 ZKSCAN2Q63HK3 967 aa18.21■□□□□ 0.51
SFXN3-202ENST00000393459 MCTP1Q6DN14 999 aa18.21■□□□□ 0.51
SFXN3-202ENST00000393459 CAVIN1Q6NZI2 390 aaKnown RBP18.21■□□□□ 0.51
SFXN3-202ENST00000393459 TRPM2O94759 1503 aa18.21■□□□□ 0.51
SFXN3-202ENST00000393459 PTPRTO14522 1441 aa18.21■□□□□ 0.51
SFXN3-202ENST00000393459 NLRP1Q9C000 1473 aa18.21■□□□□ 0.51
SFXN3-202ENST00000393459 MSNP26038 577 aaKnown RBP18.21■□□□□ 0.51
SFXN3-202ENST00000393459 TMEM57Q8N5G2 664 aa18.21■□□□□ 0.51
SFXN3-202ENST00000393459 MLH3Q9UHC1 1453 aa18.2■□□□□ 0.5
SFXN3-202ENST00000393459 SSH1Q8WYL5 1049 aa18.2■□□□□ 0.5
SFXN3-202ENST00000393459 DDX11L8A8MPP1 907 aa18.2■□□□□ 0.5
SFXN3-202ENST00000393459 CDCA8Q53HL2 280 aa18.2■□□□□ 0.5
SFXN3-202ENST00000393459 ANP32BQ92688 251 aaKnown RBP18.2■□□□□ 0.5
SFXN3-202ENST00000393459 RBM27Q9P2N5 1060 aaKnown RBP18.19■□□□□ 0.5
SFXN3-202ENST00000393459 BCL11BQ9C0K0 894 aaPredicted RBP18.19■□□□□ 0.5
SFXN3-202ENST00000393459 PKP1Q13835 747 aa18.19■□□□□ 0.5
SFXN3-202ENST00000393459 STAC3Q96MF2 364 aa18.19■□□□□ 0.5
SFXN3-202ENST00000393459 RNF17Q9BXT8 1623 aaKnown RBP18.19■□□□□ 0.5
SFXN3-202ENST00000393459 FAM177BA6PVY3 158 aa18.18■□□□□ 0.5
SFXN3-202ENST00000393459 RUNDC1Q96C34 613 aa18.18■□□□□ 0.5
SFXN3-202ENST00000393459 THUMPD2Q9BTF0 503 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms