RNA–Protein interactions for RNA: ENST00000393417.7

MDM2-213, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5

Gene MDM2, Length 1,683 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-213ENST00000393417 VGFO15240 615 aaPredicted RBP11.4□□□□□ -0.59
MDM2-213ENST00000393417 CCDC144AA2RUR9 1427 aa11.39□□□□□ -0.59
MDM2-213ENST00000393417 RGL3Q3MIN7 710 aa11.39□□□□□ -0.59
MDM2-213ENST00000393417 PRAG1Q86YV5 1406 aa11.39□□□□□ -0.59
MDM2-213ENST00000393417 NUTM2FA1L443 756 aa11.38□□□□□ -0.59
MDM2-213ENST00000393417 ADRA2BP18089 450 aa11.38□□□□□ -0.59
MDM2-213ENST00000393417 XPCQ01831 940 aaPredicted RBP11.38□□□□□ -0.59
MDM2-213ENST00000393417 STK26Q9P289 416 aa11.38□□□□□ -0.59
MDM2-213ENST00000393417 CDK12Q9NYV4 1490 aaPredicted RBP11.38□□□□□ -0.59
MDM2-213ENST00000393417 SPATA31E1Q6ZUB1 1445 aa11.37□□□□□ -0.59
MDM2-213ENST00000393417 PLEKHH1Q9ULM0 1364 aa11.37□□□□□ -0.59
MDM2-213ENST00000393417 PXDNQ92626 1479 aa11.36□□□□□ -0.59
MDM2-213ENST00000393417 SOS2Q07890 1332 aaPredicted RBP11.36□□□□□ -0.59
MDM2-213ENST00000393417 RPGRIP1LQ68CZ1 1315 aa11.36□□□□□ -0.59
MDM2-213ENST00000393417 TMEM132EQ6IEE7 984 aa11.36□□□□□ -0.59
MDM2-213ENST00000393417 WAPLQ7Z5K2 1190 aa11.36□□□□□ -0.59
MDM2-213ENST00000393417 NGLY1Q96IV0 654 aa11.36□□□□□ -0.59
MDM2-213ENST00000393417 QTRT2Q9H974 415 aaKnown RBP11.36□□□□□ -0.59
MDM2-213ENST00000393417 ABCA3Q99758 1704 aa11.35□□□□□ -0.59
MDM2-213ENST00000393417 ESCO1Q5FWF5 840 aa11.35□□□□□ -0.59
MDM2-213ENST00000393417 PIK3C2GO75747 1445 aa11.35□□□□□ -0.59
MDM2-213ENST00000393417 KIF1AQ12756 1690 aa11.35□□□□□ -0.59
MDM2-213ENST00000393417 BRWD3Q6RI45 1802 aa11.34□□□□□ -0.59
MDM2-213ENST00000393417 MPHOSPH9Q99550 1183 aa11.34□□□□□ -0.59
MDM2-213ENST00000393417 MYOM2P54296 1465 aa11.34□□□□□ -0.59
MDM2-213ENST00000393417 TECPR2O15040 1411 aa11.33□□□□□ -0.6
MDM2-213ENST00000393417 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.33□□□□□ -0.6
MDM2-213ENST00000393417 PLCH1Q4KWH8 1693 aa11.33□□□□□ -0.6
MDM2-213ENST00000393417 RBM6P78332 1123 aaKnown RBP11.33□□□□□ -0.6
MDM2-213ENST00000393417 USP21Q9UK80 565 aa11.33□□□□□ -0.6
MDM2-213ENST00000393417 LRPPRCP42704 1394 aaKnown RBP11.32□□□□□ -0.6
MDM2-213ENST00000393417 YTHDC2Q9H6S0 1430 aaKnown RBP11.32□□□□□ -0.6
MDM2-213ENST00000393417 FOXO3O43524 673 aa11.32□□□□□ -0.6
MDM2-213ENST00000393417 USP32Q8NFA0 1604 aa11.32□□□□□ -0.6
MDM2-213ENST00000393417 PLEKHG5O94827 1062 aa11.31□□□□□ -0.6
MDM2-213ENST00000393417 ANKRD30BQ9BXX2 1392 aa11.31□□□□□ -0.6
MDM2-213ENST00000393417 ATRNO75882 1429 aa11.31□□□□□ -0.6
MDM2-213ENST00000393417 NPHP3Q7Z494 1330 aa11.3□□□□□ -0.6
MDM2-213ENST00000393417 GLI3P10071 1580 aa11.3□□□□□ -0.6
MDM2-213ENST00000393417 BCL9LQ86UU0 1499 aa11.29□□□□□ -0.6
MDM2-213ENST00000393417 SAFB2Q14151 953 aaKnown RBP eCLIP11.29□□□□□ -0.6
MDM2-213ENST00000393417 ABCC11Q96J66 1382 aa11.28□□□□□ -0.6
MDM2-213ENST00000393417 NRXN1Q9ULB1 1477 aa11.28□□□□□ -0.6
MDM2-213ENST00000393417 CFAP70Q5T0N1 1121 aa11.27□□□□□ -0.6
MDM2-213ENST00000393417 TRPC5Q9UL62 973 aaPredicted RBP11.27□□□□□ -0.6
MDM2-213ENST00000393417 FNBP4Q8N3X1 1017 aaPredicted RBP11.27□□□□□ -0.61
MDM2-213ENST00000393417 ATAD2Q6PL18 1390 aa11.27□□□□□ -0.61
MDM2-213ENST00000393417 TRPM3Q9HCF6 1732 aaPredicted RBP11.26□□□□□ -0.61
MDM2-213ENST00000393417 RAB3GAP2Q9H2M9 1393 aa11.26□□□□□ -0.61
MDM2-213ENST00000393417 ARHGEF28Q8N1W1 1705 aaKnown RBP11.25□□□□□ -0.61
MDM2-213ENST00000393417 NWD2Q9ULI1 1742 aa11.25□□□□□ -0.61
MDM2-213ENST00000393417 NRAPQ86VF7 1730 aa11.25□□□□□ -0.61
MDM2-213ENST00000393417 ADGRB1O14514 1584 aa11.25□□□□□ -0.61
MDM2-213ENST00000393417 ADGRB2O60241 1585 aa11.25□□□□□ -0.61
MDM2-213ENST00000393417 TNS3Q68CZ2 1445 aa11.24□□□□□ -0.61
MDM2-213ENST00000393417 CABLES1Q8TDN4 633 aa11.24□□□□□ -0.61
MDM2-213ENST00000393417 CRYBG1Q9Y4K1 1723 aa11.24□□□□□ -0.61
MDM2-213ENST00000393417 ALS2Q96Q42 1657 aa11.24□□□□□ -0.61
MDM2-213ENST00000393417 RALGAPBQ86X10 1494 aa11.24□□□□□ -0.61
MDM2-213ENST00000393417 SPATA31A3Q5VYP0 1347 aa11.24□□□□□ -0.61
MDM2-213ENST00000393417 PRAM1Q96QH2 718 aa11.24□□□□□ -0.61
MDM2-213ENST00000393417 SLIT2O94813 1529 aa11.23□□□□□ -0.61
MDM2-213ENST00000393417 KRT28Q7Z3Y7 464 aa11.23□□□□□ -0.61
MDM2-213ENST00000393417 C14orf93Q9H972 538 aaKnown RBP11.23□□□□□ -0.61
MDM2-213ENST00000393417 DHX57Q6P158 1386 aaKnown RBP11.22□□□□□ -0.61
MDM2-213ENST00000393417 LMOD2Q6P5Q4 547 aa11.22□□□□□ -0.61
MDM2-213ENST00000393417 HIRIP3Q9BW71 556 aaPredicted RBP11.22□□□□□ -0.61
MDM2-213ENST00000393417 PHF8Q9UPP1 1060 aa11.22□□□□□ -0.61
MDM2-213ENST00000393417 DLC1Q96QB1 1528 aa11.22□□□□□ -0.61
MDM2-213ENST00000393417 ITSN1Q15811 1721 aa11.22□□□□□ -0.61
MDM2-213ENST00000393417 PMFBP1Q8TBY8 1022 aa11.21□□□□□ -0.61
MDM2-213ENST00000393417 GJD4Q96KN9 370 aaPredicted RBP11.21□□□□□ -0.61
MDM2-213ENST00000393417 HAP1P54257 671 aaPredicted RBP11.2□□□□□ -0.62
MDM2-213ENST00000393417 TRAK1Q9UPV9 953 aa11.2□□□□□ -0.62
MDM2-213ENST00000393417 MINK1Q8N4C8 1332 aaPredicted RBP11.2□□□□□ -0.62
MDM2-213ENST00000393417 POGKQ9P215 609 aa11.2□□□□□ -0.62
MDM2-213ENST00000393417 KDM2AQ9Y2K7 1162 aa11.2□□□□□ -0.62
MDM2-213ENST00000393417 UNC5CLQ8IV45 518 aa11.19□□□□□ -0.62
MDM2-213ENST00000393417 PHRF1Q9P1Y6 1649 aaKnown RBP11.19□□□□□ -0.62
MDM2-213ENST00000393417 TULP4Q9NRJ4 1543 aa11.18□□□□□ -0.62
MDM2-213ENST00000393417 COL14A1Q05707 1796 aaKnown RBP11.18□□□□□ -0.62
MDM2-213ENST00000393417 PRR36Q9H6K5 1346 aa11.18□□□□□ -0.62
MDM2-213ENST00000393417 TOPAZ1Q8N9V7 1692 aa11.18□□□□□ -0.62
MDM2-213ENST00000393417 PSME1Q06323 249 aa11.17□□□□□ -0.62
MDM2-213ENST00000393417 CCDC9Q9Y3X0 531 aaKnown RBP11.17□□□□□ -0.62
MDM2-213ENST00000393417 ANKARQ7Z5J8 1434 aa11.17□□□□□ -0.62
MDM2-213ENST00000393417 PIAS4Q8N2W9 510 aaPredicted RBP11.17□□□□□ -0.62
MDM2-213ENST00000393417 DCAF11Q8TEB1 546 aa11.17□□□□□ -0.62
MDM2-213ENST00000393417 SIRT1Q96EB6 747 aa11.17□□□□□ -0.62
MDM2-213ENST00000393417 SBNO1A3KN83 1393 aa11.17□□□□□ -0.62
MDM2-213ENST00000393417 ACIN1Q9UKV3 1341 aaKnown RBP11.16□□□□□ -0.62
MDM2-213ENST00000393417 ARHGEF10O15013 1369 aa11.15□□□□□ -0.62
MDM2-213ENST00000393417 HRCP23327 699 aa11.14□□□□□ -0.63
MDM2-213ENST00000393417 DEFB132Q7Z7B7 95 aa11.14□□□□□ -0.63
MDM2-213ENST00000393417 SEPT12Q8IYM1 358 aa11.14□□□□□ -0.63
MDM2-213ENST00000393417 TNS1Q9HBL0 1735 aaKnown RBP11.14□□□□□ -0.63
MDM2-213ENST00000393417 ATP7BP35670 1465 aa11.14□□□□□ -0.63
MDM2-213ENST00000393417 A0A0G2JS52 829 aa11.14□□□□□ -0.63
MDM2-213ENST00000393417 FAM83GA6ND36 823 aa11.14□□□□□ -0.63
MDM2-213ENST00000393417 MYT1Q01538 1121 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms