RNA–Protein interactions for RNA: ENST00000393272.7

NPHP1-203, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 2,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-203ENST00000393272 SHROOM2Q13796 1616 aa8.97□□□□□ -0.97
NPHP1-203ENST00000393272 SSFA2P28290 1259 aa8.96□□□□□ -0.97
NPHP1-203ENST00000393272 KLHL40Q2TBA0 621 aa8.96□□□□□ -0.97
NPHP1-203ENST00000393272 PDLIM2Q96JY6 352 aa8.96□□□□□ -0.97
NPHP1-203ENST00000393272 RARSP54136 660 aaKnown RBP8.96□□□□□ -0.98
NPHP1-203ENST00000393272 SASS6Q6UVJ0 657 aa8.96□□□□□ -0.98
NPHP1-203ENST00000393272 ZKSCAN5Q9Y2L8 839 aa8.96□□□□□ -0.98
NPHP1-203ENST00000393272 A2MP01023 1474 aa8.96□□□□□ -0.98
NPHP1-203ENST00000393272 CD2BP2O95400 341 aaKnown RBP8.95□□□□□ -0.98
NPHP1-203ENST00000393272 RBM25P49756 843 aaKnown RBP8.95□□□□□ -0.98
NPHP1-203ENST00000393272 ADCY10Q96PN6 1610 aa8.95□□□□□ -0.98
NPHP1-203ENST00000393272 CSPP1Q1MSJ5 1256 aa8.95□□□□□ -0.98
NPHP1-203ENST00000393272 MYO5CQ9NQX4 1742 aa8.95□□□□□ -0.98
NPHP1-203ENST00000393272 NUP153P49790 1475 aaKnown RBP8.95□□□□□ -0.98
NPHP1-203ENST00000393272 ASXL1Q8IXJ9 1541 aa8.95□□□□□ -0.98
NPHP1-203ENST00000393272 ZNF445P59923 1031 aa8.95□□□□□ -0.98
NPHP1-203ENST00000393272 WWC1Q8IX03 1113 aa8.95□□□□□ -0.98
NPHP1-203ENST00000393272 RBSNQ9H1K0 784 aa8.95□□□□□ -0.98
NPHP1-203ENST00000393272 GPATCH8Q9UKJ3 1502 aaKnown RBP8.94□□□□□ -0.98
NPHP1-203ENST00000393272 PTPRGP23470 1445 aa8.94□□□□□ -0.98
NPHP1-203ENST00000393272 GOLGA6L22H0YM25 854 aa8.94□□□□□ -0.98
NPHP1-203ENST00000393272 PPP4R3BQ5MIZ7 849 aa8.94□□□□□ -0.98
NPHP1-203ENST00000393272 JARID2Q92833 1246 aaPredicted RBP8.94□□□□□ -0.98
NPHP1-203ENST00000393272 STAC3Q96MF2 364 aa8.94□□□□□ -0.98
NPHP1-203ENST00000393272 CAVIN1Q6NZI2 390 aaKnown RBP8.94□□□□□ -0.98
NPHP1-203ENST00000393272 BCL11BQ9C0K0 894 aaPredicted RBP8.94□□□□□ -0.98
NPHP1-203ENST00000393272 PRG4Q92954 1404 aaPredicted RBP8.93□□□□□ -0.98
NPHP1-203ENST00000393272 BAG4O95429 457 aaKnown RBP8.93□□□□□ -0.98
NPHP1-203ENST00000393272 ZSCAN23Q3MJ62 389 aa8.93□□□□□ -0.98
NPHP1-203ENST00000393272 PLPPR3Q6T4P5 718 aa8.93□□□□□ -0.98
NPHP1-203ENST00000393272 KIF2CQ99661 725 aa8.93□□□□□ -0.98
NPHP1-203ENST00000393272 SYNMO15061 1565 aa8.93□□□□□ -0.98
NPHP1-203ENST00000393272 CDC42BPAQ5VT25 1732 aa8.92□□□□□ -0.98
NPHP1-203ENST00000393272 CBX1P83916 185 aa8.92□□□□□ -0.98
NPHP1-203ENST00000393272 TSC1Q92574 1164 aa8.92□□□□□ -0.98
NPHP1-203ENST00000393272 EIF2AK4Q9P2K8 1649 aaKnown RBP8.92□□□□□ -0.98
NPHP1-203ENST00000393272 C9orf84Q5VXU9 1444 aa8.92□□□□□ -0.98
NPHP1-203ENST00000393272 NCLP19338 710 aaKnown RBP8.92□□□□□ -0.98
NPHP1-203ENST00000393272 TNNT2P45379 298 aaPredicted RBP8.92□□□□□ -0.98
NPHP1-203ENST00000393272 PRIM1P49642 420 aaKnown RBP8.92□□□□□ -0.98
NPHP1-203ENST00000393272 MVPQ14764 893 aaKnown RBP8.92□□□□□ -0.98
NPHP1-203ENST00000393272 CLEC17AQ6ZS10 378 aa8.92□□□□□ -0.98
NPHP1-203ENST00000393272 GAS2L2Q8NHY3 880 aa8.92□□□□□ -0.98
NPHP1-203ENST00000393272 MYOM1P52179 1685 aa8.91□□□□□ -0.98
NPHP1-203ENST00000393272 ZBTB7CA1YPR0 619 aa8.91□□□□□ -0.98
NPHP1-203ENST00000393272 K7ELQ4 463 aaPredicted RBP8.91□□□□□ -0.98
NPHP1-203ENST00000393272 KIF20AO95235 890 aa8.91□□□□□ -0.98
NPHP1-203ENST00000393272 MCM5P33992 734 aa8.91□□□□□ -0.98
NPHP1-203ENST00000393272 NEUROD2Q15784 382 aa8.91□□□□□ -0.98
NPHP1-203ENST00000393272 ZNF710Q8N1W2 664 aa8.91□□□□□ -0.98
NPHP1-203ENST00000393272 RNF17Q9BXT8 1623 aaKnown RBP8.91□□□□□ -0.98
NPHP1-203ENST00000393272 NGEFQ8N5V2 710 aa8.91□□□□□ -0.98
NPHP1-203ENST00000393272 TROQ12816 1431 aaPredicted RBP8.91□□□□□ -0.98
NPHP1-203ENST00000393272 ARHGAP31Q2M1Z3 1444 aa8.9□□□□□ -0.98
NPHP1-203ENST00000393272 MCTP1Q6DN14 999 aa8.9□□□□□ -0.98
NPHP1-203ENST00000393272 RAPGEF6Q8TEU7 1601 aa8.9□□□□□ -0.98
NPHP1-203ENST00000393272 RBM42Q9BTD8 480 aaKnown RBP8.9□□□□□ -0.98
NPHP1-203ENST00000393272 GTPBP4Q9BZE4 634 aaKnown RBP8.9□□□□□ -0.98
NPHP1-203ENST00000393272 URB2Q14146 1524 aaKnown RBP8.9□□□□□ -0.98
NPHP1-203ENST00000393272 GRIN2AQ12879 1464 aa8.9□□□□□ -0.98
NPHP1-203ENST00000393272 MYRIPQ8NFW9 859 aa8.9□□□□□ -0.98
NPHP1-203ENST00000393272 CHMP4BQ9H444 224 aaKnown RBP8.9□□□□□ -0.98
NPHP1-203ENST00000393272 NAP1L2Q9ULW6 460 aaPredicted RBP8.9□□□□□ -0.98
NPHP1-203ENST00000393272 RRP7AQ9Y3A4 280 aaKnown RBP8.9□□□□□ -0.98
NPHP1-203ENST00000393272 CCDC141Q6ZP82 1450 aa8.9□□□□□ -0.99
NPHP1-203ENST00000393272 SHANK2Q9UPX8 1470 aa8.9□□□□□ -0.99
NPHP1-203ENST00000393272 ATP2B3Q16720 1220 aa8.9□□□□□ -0.99
NPHP1-203ENST00000393272 CCDC39Q9UFE4 941 aa8.9□□□□□ -0.99
NPHP1-203ENST00000393272 PLA2R1Q13018 1463 aa8.89□□□□□ -0.99
NPHP1-203ENST00000393272 LETM1O95202 739 aaPredicted RBP8.89□□□□□ -0.99
NPHP1-203ENST00000393272 RBM27Q9P2N5 1060 aaKnown RBP8.89□□□□□ -0.99
NPHP1-203ENST00000393272 FTSJ3Q8IY81 847 aaKnown RBP8.89□□□□□ -0.99
NPHP1-203ENST00000393272 LMBRD1Q9NUN5 540 aa8.89□□□□□ -0.99
NPHP1-203ENST00000393272 TMEM51Q9NW97 253 aa8.89□□□□□ -0.99
NPHP1-203ENST00000393272 NPC1L1Q9UHC9 1359 aa8.88□□□□□ -0.99
NPHP1-203ENST00000393272 HDAC1Q13547 482 aaPredicted RBP8.88□□□□□ -0.99
NPHP1-203ENST00000393272 PBRM1Q86U86 1689 aa8.88□□□□□ -0.99
NPHP1-203ENST00000393272 FAM177BA6PVY3 158 aa8.88□□□□□ -0.99
NPHP1-203ENST00000393272 PDIA4P13667 645 aaKnown RBP8.88□□□□□ -0.99
NPHP1-203ENST00000393272 IQGAP1P46940 1657 aa8.88□□□□□ -0.99
NPHP1-203ENST00000393272 NUP160Q12769 1436 aa8.88□□□□□ -0.99
NPHP1-203ENST00000393272 KIAA2012Q0VF49 1180 aa8.87□□□□□ -0.99
NPHP1-203ENST00000393272 DNTTIP2Q5QJE6 756 aaKnown RBP8.87□□□□□ -0.99
NPHP1-203ENST00000393272 DZIP1LQ8IYY4 767 aaKnown RBP8.87□□□□□ -0.99
NPHP1-203ENST00000393272 KIAA0556O60303 1618 aa8.87□□□□□ -0.99
NPHP1-203ENST00000393272 PKP1Q13835 747 aa8.87□□□□□ -0.99
NPHP1-203ENST00000393272 GPT2Q8TD30 523 aa8.87□□□□□ -0.99
NPHP1-203ENST00000393272 LNPKQ9C0E8 428 aa8.87□□□□□ -0.99
NPHP1-203ENST00000393272 ZKSCAN2Q63HK3 967 aa8.86□□□□□ -0.99
NPHP1-203ENST00000393272 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.86□□□□□ -0.99
NPHP1-203ENST00000393272 SHPRHQ149N8 1683 aa8.86□□□□□ -0.99
NPHP1-203ENST00000393272 SYNJ2O15056 1496 aa8.86□□□□□ -0.99
NPHP1-203ENST00000393272 IQSEC2Q5JU85 1478 aa8.86□□□□□ -0.99
NPHP1-203ENST00000393272 SYCE3A1L190 88 aa8.86□□□□□ -0.99
NPHP1-203ENST00000393272 RNF214Q8ND24 703 aa8.86□□□□□ -0.99
NPHP1-203ENST00000393272 CFAP74Q9C0B2 1584 aa8.86□□□□□ -0.99
NPHP1-203ENST00000393272 SPDYE4A6NLX3 237 aa8.85□□□□□ -0.99
NPHP1-203ENST00000393272 IGSF3O75054 1194 aa8.85□□□□□ -0.99
NPHP1-203ENST00000393272 PTMAP06454 111 aaKnown RBP8.85□□□□□ -0.99
NPHP1-203ENST00000393272 GTF2F1P35269 517 aaKnown RBP eCLIP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms