RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 KIF13AQ9H1H9 1805 aa18.93■□□□□ 0.62
MKS1-203ENST00000393120 MORC1Q86VD1 984 aa18.92■□□□□ 0.62
MKS1-203ENST00000393120 CGNL1Q0VF96 1302 aa18.92■□□□□ 0.62
MKS1-203ENST00000393120 PLEKHH1Q9ULM0 1364 aa18.92■□□□□ 0.62
MKS1-203ENST00000393120 A2ML1A8K2U0 1454 aa18.92■□□□□ 0.62
MKS1-203ENST00000393120 ALKQ9UM73 1620 aa18.91■□□□□ 0.62
MKS1-203ENST00000393120 STAG3Q9UJ98 1225 aa18.91■□□□□ 0.62
MKS1-203ENST00000393120 CCDC136Q96JN2 1154 aa18.89■□□□□ 0.61
MKS1-203ENST00000393120 GOLGA2Q08379 1002 aa18.88■□□□□ 0.61
MKS1-203ENST00000393120 STK26Q9P289 416 aa18.88■□□□□ 0.61
MKS1-203ENST00000393120 ATAD2Q6PL18 1390 aa18.88■□□□□ 0.61
MKS1-203ENST00000393120 CABP2Q9NPB3 220 aa18.88■□□□□ 0.61
MKS1-203ENST00000393120 DUSP27Q5VZP5 1158 aa18.87■□□□□ 0.61
MKS1-203ENST00000393120 TRMT2AQ8IZ69 625 aaKnown RBP18.86■□□□□ 0.61
MKS1-203ENST00000393120 RIMS2Q9UQ26 1411 aa18.86■□□□□ 0.61
MKS1-203ENST00000393120 DLC1Q96QB1 1528 aa18.86■□□□□ 0.61
MKS1-203ENST00000393120 PRAM1Q96QH2 718 aa18.86■□□□□ 0.61
MKS1-203ENST00000393120 ZMYM3Q14202 1370 aa18.85■□□□□ 0.61
MKS1-203ENST00000393120 POGKQ9P215 609 aa18.85■□□□□ 0.61
MKS1-203ENST00000393120 SLFN5Q08AF3 891 aa18.84■□□□□ 0.61
MKS1-203ENST00000393120 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.84■□□□□ 0.61
MKS1-203ENST00000393120 MLECQ14165 292 aa18.84■□□□□ 0.61
MKS1-203ENST00000393120 ABCC11Q96J66 1382 aa18.84■□□□□ 0.61
MKS1-203ENST00000393120 APAF1O14727 1248 aa18.83■□□□□ 0.6
MKS1-203ENST00000393120 SRPK2P78362 688 aaKnown RBP18.83■□□□□ 0.6
MKS1-203ENST00000393120 SAFB2Q14151 953 aaKnown RBP eCLIP18.83■□□□□ 0.6
MKS1-203ENST00000393120 CCDC146Q8IYE0 955 aa18.82■□□□□ 0.6
MKS1-203ENST00000393120 ESF1Q9H501 851 aaKnown RBP18.82■□□□□ 0.6
MKS1-203ENST00000393120 TERF2IPQ9NYB0 399 aa18.82■□□□□ 0.6
MKS1-203ENST00000393120 A0A1W2PP64 1363 aa18.81■□□□□ 0.6
MKS1-203ENST00000393120 EXOC6Q8TAG9 804 aa18.81■□□□□ 0.6
MKS1-203ENST00000393120 CFAP53Q96M91 514 aa18.81■□□□□ 0.6
MKS1-203ENST00000393120 NCBP3Q53F19 620 aaKnown RBP18.8■□□□□ 0.6
MKS1-203ENST00000393120 MED14O60244 1454 aa18.8■□□□□ 0.6
MKS1-203ENST00000393120 MINK1Q8N4C8 1332 aaPredicted RBP18.8■□□□□ 0.6
MKS1-203ENST00000393120 MTHFSP49914 203 aa18.8■□□□□ 0.6
MKS1-203ENST00000393120 HDGFP51858 240 aaKnown RBP18.8■□□□□ 0.6
MKS1-203ENST00000393120 E9PSI1 815 aa18.79■□□□□ 0.6
MKS1-203ENST00000393120 SHPRHQ149N8 1683 aa18.79■□□□□ 0.6
MKS1-203ENST00000393120 SETD1AO15047 1707 aaKnown RBP18.78■□□□□ 0.6
MKS1-203ENST00000393120 CD163L1Q9NR16 1453 aa18.78■□□□□ 0.6
MKS1-203ENST00000393120 RUNDC1Q96C34 613 aa18.78■□□□□ 0.6
MKS1-203ENST00000393120 CDK19Q9BWU1 502 aa18.78■□□□□ 0.6
MKS1-203ENST00000393120 TNNT2P45379 298 aaPredicted RBP18.77■□□□□ 0.6
MKS1-203ENST00000393120 SIRT1Q96EB6 747 aa18.77■□□□□ 0.6
MKS1-203ENST00000393120 TNRQ92752 1358 aa18.76■□□□□ 0.59
MKS1-203ENST00000393120 FANCIQ9NVI1 1328 aa18.75■□□□□ 0.59
MKS1-203ENST00000393120 NKTRP30414 1462 aaKnown RBP18.75■□□□□ 0.59
MKS1-203ENST00000393120 HDGFL2Q7Z4V5 671 aaPredicted RBP18.74■□□□□ 0.59
MKS1-203ENST00000393120 PHF23Q9BUL5 403 aaPredicted RBP18.74■□□□□ 0.59
MKS1-203ENST00000393120 SENP3Q9H4L4 574 aaPredicted RBP18.74■□□□□ 0.59
MKS1-203ENST00000393120 NRXN3Q9Y4C0 1643 aa18.74■□□□□ 0.59
MKS1-203ENST00000393120 NLRP1Q9C000 1473 aa18.74■□□□□ 0.59
MKS1-203ENST00000393120 FYB1O15117 783 aa18.74■□□□□ 0.59
MKS1-203ENST00000393120 WWC1Q8IX03 1113 aa18.74■□□□□ 0.59
MKS1-203ENST00000393120 PLIN1O60240 522 aa18.73■□□□□ 0.59
MKS1-203ENST00000393120 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.73■□□□□ 0.59
MKS1-203ENST00000393120 SPINK5Q9NQ38 1064 aaPredicted RBP18.73■□□□□ 0.59
MKS1-203ENST00000393120 IQSEC2Q5JU85 1478 aa18.73■□□□□ 0.59
MKS1-203ENST00000393120 CCDC27Q2M243 656 aa18.72■□□□□ 0.59
MKS1-203ENST00000393120 TECPR2O15040 1411 aa18.71■□□□□ 0.59
MKS1-203ENST00000393120 FAM135BQ49AJ0 1406 aa18.71■□□□□ 0.59
MKS1-203ENST00000393120 ATP7BP35670 1465 aa18.7■□□□□ 0.58
MKS1-203ENST00000393120 WAPLQ7Z5K2 1190 aa18.7■□□□□ 0.58
MKS1-203ENST00000393120 CRBNQ96SW2 442 aa18.7■□□□□ 0.58
MKS1-203ENST00000393120 CABP1Q9NZU7 370 aa18.7■□□□□ 0.58
MKS1-203ENST00000393120 METP08581 1390 aa18.7■□□□□ 0.58
MKS1-203ENST00000393120 TMEM2Q9UHN6 1383 aa18.7■□□□□ 0.58
MKS1-203ENST00000393120 WDR63Q8IWG1 891 aa18.7■□□□□ 0.58
MKS1-203ENST00000393120 TCP11L2Q8N4U5 519 aa18.7■□□□□ 0.58
MKS1-203ENST00000393120 GGNBP2Q9H3C7 697 aa18.69■□□□□ 0.58
MKS1-203ENST00000393120 ANKRD26Q9UPS8 1709 aa18.69■□□□□ 0.58
MKS1-203ENST00000393120 DMRT2Q9Y5R5 561 aa18.68■□□□□ 0.58
MKS1-203ENST00000393120 WASLO00401 505 aaPredicted RBP18.66■□□□□ 0.58
MKS1-203ENST00000393120 PNPLA6Q8IY17 1366 aa18.66■□□□□ 0.58
MKS1-203ENST00000393120 COL3A1P02461 1466 aaPredicted RBP18.66■□□□□ 0.58
MKS1-203ENST00000393120 KNDC1Q76NI1 1749 aa18.66■□□□□ 0.58
MKS1-203ENST00000393120 C20orf194Q5TEA3 1177 aa18.66■□□□□ 0.58
MKS1-203ENST00000393120 UBR1Q8IWV7 1749 aa18.65■□□□□ 0.58
MKS1-203ENST00000393120 CPSF1Q10570 1443 aaKnown RBP18.65■□□□□ 0.58
MKS1-203ENST00000393120 U2AF1L5P0DN76 240 aaPredicted RBP18.64■□□□□ 0.58
MKS1-203ENST00000393120 U2AF1Q01081 240 aaKnown RBP eCLIP18.64■□□□□ 0.58
MKS1-203ENST00000393120 CPS1P31327 1500 aa18.64■□□□□ 0.57
MKS1-203ENST00000393120 TCERG1O14776 1098 aaKnown RBP18.64■□□□□ 0.57
MKS1-203ENST00000393120 ADGRB2O60241 1585 aa18.63■□□□□ 0.57
MKS1-203ENST00000393120 TXNDC2Q86VQ3 553 aa18.62■□□□□ 0.57
MKS1-203ENST00000393120 PLEKHF1Q96S99 279 aa18.62■□□□□ 0.57
MKS1-203ENST00000393120 PLEKHG1Q9ULL1 1385 aa18.62■□□□□ 0.57
MKS1-203ENST00000393120 ADAMTS13Q76LX8 1427 aa18.61■□□□□ 0.57
MKS1-203ENST00000393120 EDC4Q6P2E9 1401 aaKnown RBP18.61■□□□□ 0.57
MKS1-203ENST00000393120 RRP7AQ9Y3A4 280 aaKnown RBP18.61■□□□□ 0.57
MKS1-203ENST00000393120 KIF20BQ96Q89 1820 aa18.6■□□□□ 0.57
MKS1-203ENST00000393120 MS4A1P11836 297 aa18.6■□□□□ 0.57
MKS1-203ENST00000393120 PDE3AQ14432 1141 aa18.6■□□□□ 0.57
MKS1-203ENST00000393120 PNNQ9H307 717 aaKnown RBP18.6■□□□□ 0.57
MKS1-203ENST00000393120 CCDC61Q9Y6R9 512 aa18.59■□□□□ 0.57
MKS1-203ENST00000393120 PPIP5K1Q6PFW1 1433 aa18.59■□□□□ 0.57
MKS1-203ENST00000393120 DIAPH1O60610 1272 aaKnown RBP18.59■□□□□ 0.57
MKS1-203ENST00000393120 BCAR3O75815 825 aa18.59■□□□□ 0.57
MKS1-203ENST00000393120 NEUROD2Q15784 382 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms