RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 TMEM132EQ6IEE7 984 aa18.85■□□□□ 0.61
USP44-202ENST00000393091 MYOM1P52179 1685 aa18.84■□□□□ 0.61
USP44-202ENST00000393091 CARD11Q9BXL7 1154 aa18.84■□□□□ 0.61
USP44-202ENST00000393091 AKAP12Q02952 1782 aa18.82■□□□□ 0.6
USP44-202ENST00000393091 PLEKHH1Q9ULM0 1364 aa18.82■□□□□ 0.6
USP44-202ENST00000393091 CENPJQ9HC77 1338 aaPredicted RBP18.82■□□□□ 0.6
USP44-202ENST00000393091 TMEM94Q12767 1356 aa18.82■□□□□ 0.6
USP44-202ENST00000393091 TESK2Q96S53 571 aa18.81■□□□□ 0.6
USP44-202ENST00000393091 BCANQ96GW7 911 aa18.81■□□□□ 0.6
USP44-202ENST00000393091 NHSL1Q5SYE7 1610 aa18.8■□□□□ 0.6
USP44-202ENST00000393091 RGPD8O14715 1765 aaPredicted RBP18.8■□□□□ 0.6
USP44-202ENST00000393091 USP54Q70EL1 1684 aa18.79■□□□□ 0.6
USP44-202ENST00000393091 ATP7BP35670 1465 aa18.78■□□□□ 0.6
USP44-202ENST00000393091 MST1RQ04912 1400 aa18.77■□□□□ 0.6
USP44-202ENST00000393091 MON2Q7Z3U7 1717 aa18.77■□□□□ 0.6
USP44-202ENST00000393091 PRAM1Q96QH2 718 aa18.77■□□□□ 0.6
USP44-202ENST00000393091 EIF4G2P78344 907 aaKnown RBP eCLIP18.76■□□□□ 0.59
USP44-202ENST00000393091 TRAK1Q9UPV9 953 aa18.76■□□□□ 0.59
USP44-202ENST00000393091 NRKQ7Z2Y5 1582 aa18.75■□□□□ 0.59
USP44-202ENST00000393091 C19orf44Q9H6X5 657 aa18.75■□□□□ 0.59
USP44-202ENST00000393091 NINLQ9Y2I6 1382 aa18.75■□□□□ 0.59
USP44-202ENST00000393091 AHDC1Q5TGY3 1603 aaPredicted RBP18.75■□□□□ 0.59
USP44-202ENST00000393091 PROSER2Q86WR7 435 aaPredicted RBP18.74■□□□□ 0.59
USP44-202ENST00000393091 MSH6P52701 1360 aa18.74■□□□□ 0.59
USP44-202ENST00000393091 TRPM3Q9HCF6 1732 aaPredicted RBP18.73■□□□□ 0.59
USP44-202ENST00000393091 WAPLQ7Z5K2 1190 aa18.72■□□□□ 0.59
USP44-202ENST00000393091 C1orf167Q5SNV9 1468 aa18.71■□□□□ 0.59
USP44-202ENST00000393091 HSPA5P11021 654 aaKnown RBP18.71■□□□□ 0.59
USP44-202ENST00000393091 STK26Q9P289 416 aa18.71■□□□□ 0.59
USP44-202ENST00000393091 WASLO00401 505 aaPredicted RBP18.71■□□□□ 0.58
USP44-202ENST00000393091 ST20-MTHFSA0A0A6YYL1 179 aa18.7■□□□□ 0.58
USP44-202ENST00000393091 ROBO1Q9Y6N7 1651 aa18.7■□□□□ 0.58
USP44-202ENST00000393091 BRD4O60885 1362 aaPredicted RBP18.7■□□□□ 0.58
USP44-202ENST00000393091 CERKQ8TCT0 537 aa18.69■□□□□ 0.58
USP44-202ENST00000393091 EVC2Q86UK5 1308 aa18.69■□□□□ 0.58
USP44-202ENST00000393091 ATAD2Q6PL18 1390 aa18.69■□□□□ 0.58
USP44-202ENST00000393091 POGKQ9P215 609 aa18.69■□□□□ 0.58
USP44-202ENST00000393091 POLR3AO14802 1390 aaPredicted RBP18.68■□□□□ 0.58
USP44-202ENST00000393091 CADPS2Q86UW7 1296 aa18.68■□□□□ 0.58
USP44-202ENST00000393091 DISP3Q9P2K9 1392 aa18.67■□□□□ 0.58
USP44-202ENST00000393091 ALS2Q96Q42 1657 aa18.66■□□□□ 0.58
USP44-202ENST00000393091 CD163L1Q9NR16 1453 aa18.66■□□□□ 0.58
USP44-202ENST00000393091 CDCA8Q53HL2 280 aa18.65■□□□□ 0.58
USP44-202ENST00000393091 CPSF1Q10570 1443 aaKnown RBP18.65■□□□□ 0.58
USP44-202ENST00000393091 COL22A1Q8NFW1 1626 aaPredicted RBP18.65■□□□□ 0.58
USP44-202ENST00000393091 CRYBG1Q9Y4K1 1723 aa18.65■□□□□ 0.58
USP44-202ENST00000393091 ANKRD26Q9UPS8 1709 aa18.64■□□□□ 0.57
USP44-202ENST00000393091 TMF1P82094 1093 aa18.64■□□□□ 0.57
USP44-202ENST00000393091 MARF1Q9Y4F3 1742 aaKnown RBP18.63■□□□□ 0.57
USP44-202ENST00000393091 PLEKHG3A1L390 1219 aa18.63■□□□□ 0.57
USP44-202ENST00000393091 CDK19Q9BWU1 502 aa18.62■□□□□ 0.57
USP44-202ENST00000393091 COL16A1Q07092 1604 aaPredicted RBP18.62■□□□□ 0.57
USP44-202ENST00000393091 PRR36Q9H6K5 1346 aa18.62■□□□□ 0.57
USP44-202ENST00000393091 PXDNQ92626 1479 aa18.62■□□□□ 0.57
USP44-202ENST00000393091 SSH2Q76I76 1423 aa18.62■□□□□ 0.57
USP44-202ENST00000393091 MED1Q15648 1581 aaPredicted RBP18.61■□□□□ 0.57
USP44-202ENST00000393091 SHPRHQ149N8 1683 aa18.61■□□□□ 0.57
USP44-202ENST00000393091 KIF20BQ96Q89 1820 aa18.61■□□□□ 0.57
USP44-202ENST00000393091 MINK1Q8N4C8 1332 aaPredicted RBP18.6■□□□□ 0.57
USP44-202ENST00000393091 CCDC7Q96M83 1385 aa18.6■□□□□ 0.57
USP44-202ENST00000393091 SENP3Q9H4L4 574 aaPredicted RBP18.59■□□□□ 0.57
USP44-202ENST00000393091 PHLPP1O60346 1717 aa18.59■□□□□ 0.57
USP44-202ENST00000393091 ATF3P18847 181 aa18.58■□□□□ 0.57
USP44-202ENST00000393091 PPIP5K1Q6PFW1 1433 aa18.58■□□□□ 0.56
USP44-202ENST00000393091 ABCA3Q99758 1704 aa18.57■□□□□ 0.56
USP44-202ENST00000393091 NUDT16Q96DE0 195 aaKnown RBP18.56■□□□□ 0.56
USP44-202ENST00000393091 SLAIN2Q9P270 581 aa18.56■□□□□ 0.56
USP44-202ENST00000393091 CCDC61Q9Y6R9 512 aa18.56■□□□□ 0.56
USP44-202ENST00000393091 ANKRD36BQ8N2N9 1353 aa18.55■□□□□ 0.56
USP44-202ENST00000393091 KIF7Q2M1P5 1343 aa18.55■□□□□ 0.56
USP44-202ENST00000393091 TOM1O60784 492 aa18.54■□□□□ 0.56
USP44-202ENST00000393091 SBNO1A3KN83 1393 aa18.54■□□□□ 0.56
USP44-202ENST00000393091 C11orf95C9JLR9 678 aaPredicted RBP18.54■□□□□ 0.56
USP44-202ENST00000393091 PIK3C2AO00443 1686 aa18.54■□□□□ 0.56
USP44-202ENST00000393091 WASHC2AQ641Q2 1341 aa18.53■□□□□ 0.56
USP44-202ENST00000393091 PHRF1Q9P1Y6 1649 aaKnown RBP18.53■□□□□ 0.56
USP44-202ENST00000393091 USP6P35125 1406 aa18.52■□□□□ 0.56
USP44-202ENST00000393091 BRINP3Q76B58 766 aa18.51■□□□□ 0.55
USP44-202ENST00000393091 EDC4Q6P2E9 1401 aaKnown RBP18.51■□□□□ 0.55
USP44-202ENST00000393091 SOS2Q07890 1332 aaPredicted RBP18.51■□□□□ 0.55
USP44-202ENST00000393091 ZNF692Q9BU19 519 aaPredicted RBP18.5■□□□□ 0.55
USP44-202ENST00000393091 NPC1L1Q9UHC9 1359 aa18.5■□□□□ 0.55
USP44-202ENST00000393091 SAFB2Q14151 953 aaKnown RBP eCLIP18.5■□□□□ 0.55
USP44-202ENST00000393091 HIRIP3Q9BW71 556 aaPredicted RBP18.5■□□□□ 0.55
USP44-202ENST00000393091 CABP2Q9NPB3 220 aa18.49■□□□□ 0.55
USP44-202ENST00000393091 SLIT3O75094 1523 aa18.49■□□□□ 0.55
USP44-202ENST00000393091 RBM33Q96EV2 1170 aaKnown RBP18.49■□□□□ 0.55
USP44-202ENST00000393091 C14orf37Q86TY3 774 aa18.48■□□□□ 0.55
USP44-202ENST00000393091 PHF8Q9UPP1 1060 aa18.48■□□□□ 0.55
USP44-202ENST00000393091 ABCC6O95255 1503 aa18.48■□□□□ 0.55
USP44-202ENST00000393091 SRPK2P78362 688 aaKnown RBP18.47■□□□□ 0.55
USP44-202ENST00000393091 USP31Q70CQ4 1352 aa18.47■□□□□ 0.55
USP44-202ENST00000393091 A0A1W2PP64 1363 aa18.47■□□□□ 0.55
USP44-202ENST00000393091 NPHP3Q7Z494 1330 aa18.46■□□□□ 0.54
USP44-202ENST00000393091 TTC21AQ8NDW8 1320 aa18.45■□□□□ 0.54
USP44-202ENST00000393091 ZNF316A6NFI3 1004 aaPredicted RBP18.44■□□□□ 0.54
USP44-202ENST00000393091 NSD2O96028 1365 aa18.44■□□□□ 0.54
USP44-202ENST00000393091 TNS3Q68CZ2 1445 aa18.44■□□□□ 0.54
USP44-202ENST00000393091 ACEP12821 1306 aa18.44■□□□□ 0.54
USP44-202ENST00000393091 ORAI2Q96SN7 254 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms