RNA–Protein interactions for RNA: ENST00000392901.10

SHTN1-203, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-203ENST00000392901 PPP2R1AP30153 589 aa23.79■■□□□ 1.4
SHTN1-203ENST00000392901 NPC1L1Q9UHC9 1359 aa23.79■■□□□ 1.4
SHTN1-203ENST00000392901 FKBP8Q14318 412 aa23.78■■□□□ 1.4
SHTN1-203ENST00000392901 SETD1AO15047 1707 aaKnown RBP23.78■■□□□ 1.4
SHTN1-203ENST00000392901 LTKP29376 864 aa23.78■■□□□ 1.4
SHTN1-203ENST00000392901 TXNDC2Q86VQ3 553 aa23.76■■□□□ 1.39
SHTN1-203ENST00000392901 NSD3Q9BZ95 1437 aa23.75■■□□□ 1.39
SHTN1-203ENST00000392901 ABCC11Q96J66 1382 aa23.75■■□□□ 1.39
SHTN1-203ENST00000392901 PLEKHH1Q9ULM0 1364 aa23.74■■□□□ 1.39
SHTN1-203ENST00000392901 EID1Q9Y6B2 187 aa23.74■■□□□ 1.39
SHTN1-203ENST00000392901 CDK19Q9BWU1 502 aa23.73■■□□□ 1.39
SHTN1-203ENST00000392901 DLC1Q96QB1 1528 aa23.72■■□□□ 1.39
SHTN1-203ENST00000392901 THEMISQ8N1K5 641 aaPredicted RBP23.7■■□□□ 1.38
SHTN1-203ENST00000392901 ANKRD36BQ8N2N9 1353 aa23.69■■□□□ 1.38
SHTN1-203ENST00000392901 ATAD2Q6PL18 1390 aa23.69■■□□□ 1.38
SHTN1-203ENST00000392901 PLEKHG1Q9ULL1 1385 aa23.69■■□□□ 1.38
SHTN1-203ENST00000392901 NEFLP07196 543 aa23.68■■□□□ 1.38
SHTN1-203ENST00000392901 ADAMTS13Q76LX8 1427 aa23.68■■□□□ 1.38
SHTN1-203ENST00000392901 SLC26A8Q96RN1 970 aa23.68■■□□□ 1.38
SHTN1-203ENST00000392901 RIMS1Q86UR5 1692 aaKnown RBP23.67■■□□□ 1.38
SHTN1-203ENST00000392901 MORC1Q86VD1 984 aa23.66■■□□□ 1.38
SHTN1-203ENST00000392901 CGNL1Q0VF96 1302 aa23.66■■□□□ 1.38
SHTN1-203ENST00000392901 NINLQ9Y2I6 1382 aa23.65■■□□□ 1.38
SHTN1-203ENST00000392901 TNNT2P45379 298 aaPredicted RBP23.65■■□□□ 1.38
SHTN1-203ENST00000392901 A0A1W2PP64 1363 aa23.65■■□□□ 1.38
SHTN1-203ENST00000392901 SLIT1O75093 1534 aa23.64■■□□□ 1.38
SHTN1-203ENST00000392901 SALL2Q9Y467 1007 aaPredicted RBP23.64■■□□□ 1.38
SHTN1-203ENST00000392901 ARHGAP23Q9P227 1491 aa23.63■■□□□ 1.37
SHTN1-203ENST00000392901 CABP1Q9NZU7 370 aa23.63■■□□□ 1.37
SHTN1-203ENST00000392901 WDR43Q15061 677 aaKnown RBP eCLIP23.62■■□□□ 1.37
SHTN1-203ENST00000392901 TERF2IPQ9NYB0 399 aa23.62■■□□□ 1.37
SHTN1-203ENST00000392901 ADAMTS8Q9UP79 889 aa23.62■■□□□ 1.37
SHTN1-203ENST00000392901 SIRT1Q96EB6 747 aa23.62■■□□□ 1.37
SHTN1-203ENST00000392901 TECPR2O15040 1411 aa23.61■■□□□ 1.37
SHTN1-203ENST00000392901 FAM135BQ49AJ0 1406 aa23.61■■□□□ 1.37
SHTN1-203ENST00000392901 WASLO00401 505 aaPredicted RBP23.6■■□□□ 1.37
SHTN1-203ENST00000392901 ROBO2Q9HCK4 1378 aa23.59■■□□□ 1.37
SHTN1-203ENST00000392901 KNDC1Q76NI1 1749 aa23.58■■□□□ 1.37
SHTN1-203ENST00000392901 HDGFL2Q7Z4V5 671 aaPredicted RBP23.58■■□□□ 1.37
SHTN1-203ENST00000392901 ADAMTSL3P82987 1691 aa23.57■■□□□ 1.36
SHTN1-203ENST00000392901 MED14O60244 1454 aa23.57■■□□□ 1.36
SHTN1-203ENST00000392901 USP32Q8NFA0 1604 aa23.57■■□□□ 1.36
SHTN1-203ENST00000392901 IRX6P78412 446 aaPredicted RBP23.57■■□□□ 1.36
SHTN1-203ENST00000392901 CPS1P31327 1500 aa23.57■■□□□ 1.36
SHTN1-203ENST00000392901 CD163L1Q9NR16 1453 aa23.57■■□□□ 1.36
SHTN1-203ENST00000392901 CEP170BQ9Y4F5 1589 aaPredicted RBP23.57■■□□□ 1.36
SHTN1-203ENST00000392901 TBX22Q9Y458 520 aa23.56■■□□□ 1.36
SHTN1-203ENST00000392901 BLMP54132 1417 aaPredicted RBP23.56■■□□□ 1.36
SHTN1-203ENST00000392901 SMG6Q86US8 1419 aaKnown RBP23.54■■□□□ 1.36
SHTN1-203ENST00000392901 PTPRUQ92729 1446 aa23.54■■□□□ 1.36
SHTN1-203ENST00000392901 INSRP06213 1382 aa23.54■■□□□ 1.36
SHTN1-203ENST00000392901 GGNBP2Q9H3C7 697 aa23.54■■□□□ 1.36
SHTN1-203ENST00000392901 AMOTL2Q9Y2J4 779 aa23.54■■□□□ 1.36
SHTN1-203ENST00000392901 NSD2O96028 1365 aa23.54■■□□□ 1.36
SHTN1-203ENST00000392901 NUDCQ9Y266 331 aa23.53■■□□□ 1.36
SHTN1-203ENST00000392901 NUDT16Q96DE0 195 aaKnown RBP23.52■■□□□ 1.36
SHTN1-203ENST00000392901 FYB1O15117 783 aa23.51■■□□□ 1.35
SHTN1-203ENST00000392901 NCKAP5LQ9HCH0 1330 aa23.51■■□□□ 1.35
SHTN1-203ENST00000392901 MTHFSP49914 203 aa23.5■■□□□ 1.35
SHTN1-203ENST00000392901 POLR3AO14802 1390 aaPredicted RBP23.5■■□□□ 1.35
SHTN1-203ENST00000392901 PPIP5K1Q6PFW1 1433 aa23.49■■□□□ 1.35
SHTN1-203ENST00000392901 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.48■■□□□ 1.35
SHTN1-203ENST00000392901 CCDC61Q9Y6R9 512 aa23.48■■□□□ 1.35
SHTN1-203ENST00000392901 ANKLE2Q86XL3 938 aa23.48■■□□□ 1.35
SHTN1-203ENST00000392901 CCDC146Q8IYE0 955 aa23.47■■□□□ 1.35
SHTN1-203ENST00000392901 ATP7BP35670 1465 aa23.47■■□□□ 1.35
SHTN1-203ENST00000392901 NUTM2FA1L443 756 aa23.47■■□□□ 1.35
SHTN1-203ENST00000392901 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.45■■□□□ 1.35
SHTN1-203ENST00000392901 PRR36Q9H6K5 1346 aa23.44■■□□□ 1.34
SHTN1-203ENST00000392901 SETD1BQ9UPS6 1966 aaKnown RBP23.44■■□□□ 1.34
SHTN1-203ENST00000392901 DIP2AQ14689 1571 aa23.43■■□□□ 1.34
SHTN1-203ENST00000392901 PDE3BQ13370 1112 aa23.43■■□□□ 1.34
SHTN1-203ENST00000392901 CFAP53Q96M91 514 aa23.43■■□□□ 1.34
SHTN1-203ENST00000392901 CDCA7LQ96GN5 454 aa23.42■■□□□ 1.34
SHTN1-203ENST00000392901 CPSF1Q10570 1443 aaKnown RBP23.41■■□□□ 1.34
SHTN1-203ENST00000392901 PELP1Q8IZL8 1130 aaKnown RBP23.41■■□□□ 1.34
SHTN1-203ENST00000392901 ZNF142P52746 1687 aaPredicted RBP23.41■■□□□ 1.34
SHTN1-203ENST00000392901 KCNA6P17658 529 aa23.41■■□□□ 1.34
SHTN1-203ENST00000392901 PTCH1Q13635 1447 aa23.4■■□□□ 1.34
SHTN1-203ENST00000392901 ADGRB2O60241 1585 aa23.39■■□□□ 1.33
SHTN1-203ENST00000392901 APAF1O14727 1248 aa23.38■■□□□ 1.33
SHTN1-203ENST00000392901 EDC4Q6P2E9 1401 aaKnown RBP23.37■■□□□ 1.33
SHTN1-203ENST00000392901 CDC42BPGQ6DT37 1551 aa23.36■■□□□ 1.33
SHTN1-203ENST00000392901 ANKRD26Q9UPS8 1709 aa23.36■■□□□ 1.33
SHTN1-203ENST00000392901 PIK3R4Q99570 1358 aa23.36■■□□□ 1.33
SHTN1-203ENST00000392901 KIF20BQ96Q89 1820 aa23.36■■□□□ 1.33
SHTN1-203ENST00000392901 NME9Q86XW9 330 aa23.35■■□□□ 1.33
SHTN1-203ENST00000392901 ZNF692Q9BU19 519 aaPredicted RBP23.35■■□□□ 1.33
SHTN1-203ENST00000392901 SHPRHQ149N8 1683 aa23.35■■□□□ 1.33
SHTN1-203ENST00000392901 FBLN1P23142 703 aa23.34■■□□□ 1.33
SHTN1-203ENST00000392901 XRN1Q8IZH2 1706 aaKnown RBP23.34■■□□□ 1.33
SHTN1-203ENST00000392901 RNF123Q5XPI4 1314 aa23.34■■□□□ 1.33
SHTN1-203ENST00000392901 ERICH6BQ5W0A0 696 aa23.33■■□□□ 1.33
SHTN1-203ENST00000392901 ZRANB1Q9UGI0 708 aa23.33■■□□□ 1.33
SHTN1-203ENST00000392901 ACEP12821 1306 aa23.33■■□□□ 1.33
SHTN1-203ENST00000392901 U2AF1L5P0DN76 240 aaPredicted RBP23.31■■□□□ 1.32
SHTN1-203ENST00000392901 U2AF1Q01081 240 aaKnown RBP eCLIP23.31■■□□□ 1.32
SHTN1-203ENST00000392901 PLEKHG3A1L390 1219 aa23.31■■□□□ 1.32
SHTN1-203ENST00000392901 PPM1GO15355 546 aaPredicted RBP23.3■■□□□ 1.32
SHTN1-203ENST00000392901 ZNF521Q96K83 1311 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms