RNA–Protein interactions for RNA: ENST00000392784.6

USP30-203, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 2 BASIC

Gene USP30, Length 2,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-203ENST00000392784 PLPPR3Q6T4P5 718 aa12.47□□□□□ -0.41
USP30-203ENST00000392784 PLEKHH1Q9ULM0 1364 aa12.46□□□□□ -0.41
USP30-203ENST00000392784 TNNT2P45379 298 aaPredicted RBP12.46□□□□□ -0.41
USP30-203ENST00000392784 WAPLQ7Z5K2 1190 aa12.46□□□□□ -0.42
USP30-203ENST00000392784 POGKQ9P215 609 aa12.45□□□□□ -0.42
USP30-203ENST00000392784 C3P01024 1663 aa12.45□□□□□ -0.42
USP30-203ENST00000392784 SRPK2P78362 688 aaKnown RBP12.45□□□□□ -0.42
USP30-203ENST00000392784 CDCA7LQ96GN5 454 aa12.45□□□□□ -0.42
USP30-203ENST00000392784 METP08581 1390 aa12.44□□□□□ -0.42
USP30-203ENST00000392784 USP32Q8NFA0 1604 aa12.44□□□□□ -0.42
USP30-203ENST00000392784 FER1L4A9Z1Z3 1794 aa12.44□□□□□ -0.42
USP30-203ENST00000392784 A0A1W2PP64 1363 aa12.42□□□□□ -0.42
USP30-203ENST00000392784 ANKRD36BQ8N2N9 1353 aa12.42□□□□□ -0.42
USP30-203ENST00000392784 WDR43Q15061 677 aaKnown RBP eCLIP12.42□□□□□ -0.42
USP30-203ENST00000392784 CCDC146Q8IYE0 955 aa12.42□□□□□ -0.42
USP30-203ENST00000392784 CD163L1Q9NR16 1453 aa12.42□□□□□ -0.42
USP30-203ENST00000392784 SHPRHQ149N8 1683 aa12.41□□□□□ -0.42
USP30-203ENST00000392784 MORC1Q86VD1 984 aa12.41□□□□□ -0.42
USP30-203ENST00000392784 TMEM2Q9UHN6 1383 aa12.41□□□□□ -0.42
USP30-203ENST00000392784 CDK19Q9BWU1 502 aa12.4□□□□□ -0.42
USP30-203ENST00000392784 INSRP06213 1382 aa12.4□□□□□ -0.42
USP30-203ENST00000392784 DLC1Q96QB1 1528 aa12.4□□□□□ -0.42
USP30-203ENST00000392784 PUS7Q96PZ0 661 aaKnown RBP12.4□□□□□ -0.42
USP30-203ENST00000392784 LTKP29376 864 aa12.39□□□□□ -0.43
USP30-203ENST00000392784 TXNDC2Q86VQ3 553 aa12.39□□□□□ -0.43
USP30-203ENST00000392784 CGNL1Q0VF96 1302 aa12.39□□□□□ -0.43
USP30-203ENST00000392784 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.38□□□□□ -0.43
USP30-203ENST00000392784 RNF123Q5XPI4 1314 aa12.38□□□□□ -0.43
USP30-203ENST00000392784 ABCC11Q96J66 1382 aa12.38□□□□□ -0.43
USP30-203ENST00000392784 ATAD2Q6PL18 1390 aa12.37□□□□□ -0.43
USP30-203ENST00000392784 ADAMTS13Q76LX8 1427 aa12.37□□□□□ -0.43
USP30-203ENST00000392784 KNDC1Q76NI1 1749 aa12.37□□□□□ -0.43
USP30-203ENST00000392784 GGNBP2Q9H3C7 697 aa12.37□□□□□ -0.43
USP30-203ENST00000392784 CABP1Q9NZU7 370 aa12.37□□□□□ -0.43
USP30-203ENST00000392784 POLR3AO14802 1390 aaPredicted RBP12.36□□□□□ -0.43
USP30-203ENST00000392784 MTHFSP49914 203 aa12.36□□□□□ -0.43
USP30-203ENST00000392784 NCKAP5LQ9HCH0 1330 aa12.36□□□□□ -0.43
USP30-203ENST00000392784 ANKRD26Q9UPS8 1709 aa12.36□□□□□ -0.43
USP30-203ENST00000392784 NLRP1Q9C000 1473 aa12.35□□□□□ -0.43
USP30-203ENST00000392784 APAF1O14727 1248 aa12.35□□□□□ -0.43
USP30-203ENST00000392784 B4GALNT3Q6L9W6 998 aa12.35□□□□□ -0.43
USP30-203ENST00000392784 KIF20BQ96Q89 1820 aa12.35□□□□□ -0.43
USP30-203ENST00000392784 TSHZ2Q9NRE2 1034 aa12.35□□□□□ -0.43
USP30-203ENST00000392784 CPS1P31327 1500 aa12.34□□□□□ -0.43
USP30-203ENST00000392784 NINLQ9Y2I6 1382 aa12.34□□□□□ -0.43
USP30-203ENST00000392784 PDE3BQ13370 1112 aa12.34□□□□□ -0.43
USP30-203ENST00000392784 ROBO2Q9HCK4 1378 aa12.34□□□□□ -0.43
USP30-203ENST00000392784 ZNF521Q96K83 1311 aa12.34□□□□□ -0.43
USP30-203ENST00000392784 FYB1O15117 783 aa12.34□□□□□ -0.43
USP30-203ENST00000392784 SLC26A8Q96RN1 970 aa12.34□□□□□ -0.43
USP30-203ENST00000392784 PPP4R2Q9NY27 417 aa12.33□□□□□ -0.44
USP30-203ENST00000392784 RCAN3Q9UKA8 241 aa12.33□□□□□ -0.44
USP30-203ENST00000392784 RIMS1Q86UR5 1692 aaKnown RBP12.33□□□□□ -0.44
USP30-203ENST00000392784 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.33□□□□□ -0.44
USP30-203ENST00000392784 DMRT2Q9Y5R5 561 aa12.33□□□□□ -0.44
USP30-203ENST00000392784 TECPR2O15040 1411 aa12.33□□□□□ -0.44
USP30-203ENST00000392784 NSD2O96028 1365 aa12.32□□□□□ -0.44
USP30-203ENST00000392784 SPINK5Q9NQ38 1064 aaPredicted RBP12.32□□□□□ -0.44
USP30-203ENST00000392784 TERF2IPQ9NYB0 399 aa12.32□□□□□ -0.44
USP30-203ENST00000392784 PTPRUQ92729 1446 aa12.32□□□□□ -0.44
USP30-203ENST00000392784 PLEKHG1Q9ULL1 1385 aa12.32□□□□□ -0.44
USP30-203ENST00000392784 WASLO00401 505 aaPredicted RBP12.32□□□□□ -0.44
USP30-203ENST00000392784 FBLN1P23142 703 aa12.32□□□□□ -0.44
USP30-203ENST00000392784 HDGFP51858 240 aaKnown RBP12.31□□□□□ -0.44
USP30-203ENST00000392784 RRP1P56182 461 aaKnown RBP12.31□□□□□ -0.44
USP30-203ENST00000392784 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.31□□□□□ -0.44
USP30-203ENST00000392784 ARHGAP23Q9P227 1491 aa12.31□□□□□ -0.44
USP30-203ENST00000392784 ERICH6BQ5W0A0 696 aa12.31□□□□□ -0.44
USP30-203ENST00000392784 SLIT1O75093 1534 aa12.31□□□□□ -0.44
USP30-203ENST00000392784 MED14O60244 1454 aa12.3□□□□□ -0.44
USP30-203ENST00000392784 FAM135BQ49AJ0 1406 aa12.3□□□□□ -0.44
USP30-203ENST00000392784 PPIP5K1Q6PFW1 1433 aa12.3□□□□□ -0.44
USP30-203ENST00000392784 HDGFL2Q7Z4V5 671 aaPredicted RBP12.3□□□□□ -0.44
USP30-203ENST00000392784 PELP1Q8IZL8 1130 aaKnown RBP12.3□□□□□ -0.44
USP30-203ENST00000392784 PLIN1O60240 522 aa12.3□□□□□ -0.44
USP30-203ENST00000392784 DUSP27Q5VZP5 1158 aa12.3□□□□□ -0.44
USP30-203ENST00000392784 PRR36Q9H6K5 1346 aa12.29□□□□□ -0.44
USP30-203ENST00000392784 RRP7AQ9Y3A4 280 aaKnown RBP12.29□□□□□ -0.44
USP30-203ENST00000392784 ATP7BP35670 1465 aa12.29□□□□□ -0.44
USP30-203ENST00000392784 NUDT16Q96DE0 195 aaKnown RBP12.29□□□□□ -0.44
USP30-203ENST00000392784 COL3A1P02461 1466 aaPredicted RBP12.28□□□□□ -0.44
USP30-203ENST00000392784 NUTM2FA1L443 756 aa12.28□□□□□ -0.44
USP30-203ENST00000392784 ZRANB1Q9UGI0 708 aa12.28□□□□□ -0.44
USP30-203ENST00000392784 IQSEC2Q5JU85 1478 aa12.28□□□□□ -0.44
USP30-203ENST00000392784 MAP2P11137 1827 aaKnown RBP12.28□□□□□ -0.44
USP30-203ENST00000392784 GOLGA2Q08379 1002 aa12.28□□□□□ -0.44
USP30-203ENST00000392784 NEUROD2Q15784 382 aa12.28□□□□□ -0.44
USP30-203ENST00000392784 CPSF1Q10570 1443 aaKnown RBP12.27□□□□□ -0.44
USP30-203ENST00000392784 AKAP12Q02952 1782 aa12.27□□□□□ -0.44
USP30-203ENST00000392784 MON2Q7Z3U7 1717 aa12.27□□□□□ -0.44
USP30-203ENST00000392784 EID1Q9Y6B2 187 aa12.27□□□□□ -0.45
USP30-203ENST00000392784 CDC42BPGQ6DT37 1551 aa12.27□□□□□ -0.45
USP30-203ENST00000392784 ITSN1Q15811 1721 aa12.27□□□□□ -0.45
USP30-203ENST00000392784 SLFN5Q08AF3 891 aa12.27□□□□□ -0.45
USP30-203ENST00000392784 EXOC6Q8TAG9 804 aa12.27□□□□□ -0.45
USP30-203ENST00000392784 CEP170BQ9Y4F5 1589 aaPredicted RBP12.26□□□□□ -0.45
USP30-203ENST00000392784 NME9Q86XW9 330 aa12.26□□□□□ -0.45
USP30-203ENST00000392784 CFAP53Q96M91 514 aa12.26□□□□□ -0.45
USP30-203ENST00000392784 SIRT1Q96EB6 747 aa12.26□□□□□ -0.45
USP30-203ENST00000392784 RGPD8O14715 1765 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms