RNA–Protein interactions for RNA: ENST00000392710.8

PRKAR1A-202, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 2

Gene PRKAR1A, Length 3,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-202ENST00000392710 TMEM132EQ6IEE7 984 aa9.68□□□□□ -0.86
PRKAR1A-202ENST00000392710 CHGAP10645 457 aaKnown RBP9.68□□□□□ -0.86
PRKAR1A-202ENST00000392710 NSD2O96028 1365 aa9.67□□□□□ -0.86
PRKAR1A-202ENST00000392710 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.67□□□□□ -0.86
PRKAR1A-202ENST00000392710 NRKQ7Z2Y5 1582 aa9.67□□□□□ -0.86
PRKAR1A-202ENST00000392710 CDC42BPGQ6DT37 1551 aa9.67□□□□□ -0.86
PRKAR1A-202ENST00000392710 SMG6Q86US8 1419 aaKnown RBP9.66□□□□□ -0.86
PRKAR1A-202ENST00000392710 ATP7BP35670 1465 aa9.66□□□□□ -0.86
PRKAR1A-202ENST00000392710 TRAK1Q9UPV9 953 aa9.66□□□□□ -0.86
PRKAR1A-202ENST00000392710 METP08581 1390 aa9.66□□□□□ -0.86
PRKAR1A-202ENST00000392710 EVC2Q86UK5 1308 aa9.66□□□□□ -0.86
PRKAR1A-202ENST00000392710 ATAD2Q6PL18 1390 aa9.65□□□□□ -0.87
PRKAR1A-202ENST00000392710 PTCH1Q13635 1447 aa9.64□□□□□ -0.87
PRKAR1A-202ENST00000392710 CPSF1Q10570 1443 aaKnown RBP9.64□□□□□ -0.87
PRKAR1A-202ENST00000392710 POLR3AO14802 1390 aaPredicted RBP9.64□□□□□ -0.87
PRKAR1A-202ENST00000392710 PPP2R1AP30153 589 aa9.64□□□□□ -0.87
PRKAR1A-202ENST00000392710 USP54Q70EL1 1684 aa9.63□□□□□ -0.87
PRKAR1A-202ENST00000392710 NSD3Q9BZ95 1437 aa9.63□□□□□ -0.87
PRKAR1A-202ENST00000392710 RNF123Q5XPI4 1314 aa9.63□□□□□ -0.87
PRKAR1A-202ENST00000392710 KNSTRNQ9Y448 316 aa9.63□□□□□ -0.87
PRKAR1A-202ENST00000392710 PTPRUQ92729 1446 aa9.63□□□□□ -0.87
PRKAR1A-202ENST00000392710 HNRNPUQ00839 825 aaKnown RBP eCLIP9.63□□□□□ -0.87
PRKAR1A-202ENST00000392710 CHD2O14647 1828 aaKnown RBP9.63□□□□□ -0.87
PRKAR1A-202ENST00000392710 HDGFP51858 240 aaKnown RBP9.62□□□□□ -0.87
PRKAR1A-202ENST00000392710 MLECQ14165 292 aa9.62□□□□□ -0.87
PRKAR1A-202ENST00000392710 POLR3GLQ9BT43 218 aa9.62□□□□□ -0.87
PRKAR1A-202ENST00000392710 NUTM2DQ5VT03 806 aaPredicted RBP9.62□□□□□ -0.87
PRKAR1A-202ENST00000392710 COL3A1P02461 1466 aaPredicted RBP9.62□□□□□ -0.87
PRKAR1A-202ENST00000392710 ITSN1Q15811 1721 aa9.62□□□□□ -0.87
PRKAR1A-202ENST00000392710 A0A1W2PP64 1363 aa9.61□□□□□ -0.87
PRKAR1A-202ENST00000392710 PLEKHH1Q9ULM0 1364 aa9.61□□□□□ -0.87
PRKAR1A-202ENST00000392710 TMC1Q8TDI8 760 aa9.61□□□□□ -0.87
PRKAR1A-202ENST00000392710 NALCNQ8IZF0 1738 aa9.61□□□□□ -0.87
PRKAR1A-202ENST00000392710 PIK3R4Q99570 1358 aa9.61□□□□□ -0.87
PRKAR1A-202ENST00000392710 PRAM1Q96QH2 718 aa9.6□□□□□ -0.87
PRKAR1A-202ENST00000392710 FAM9BQ8IZU0 186 aa9.6□□□□□ -0.87
PRKAR1A-202ENST00000392710 IQSEC2Q5JU85 1478 aa9.6□□□□□ -0.87
PRKAR1A-202ENST00000392710 LTKP29376 864 aa9.6□□□□□ -0.87
PRKAR1A-202ENST00000392710 ESF1Q9H501 851 aaKnown RBP9.6□□□□□ -0.87
PRKAR1A-202ENST00000392710 NWD1Q149M9 1564 aa9.59□□□□□ -0.87
PRKAR1A-202ENST00000392710 CC2D1BQ5T0F9 858 aaKnown RBP9.59□□□□□ -0.87
PRKAR1A-202ENST00000392710 SUPT16HQ9Y5B9 1047 aaKnown RBP9.59□□□□□ -0.87
PRKAR1A-202ENST00000392710 SLC12A5Q9H2X9 1139 aa9.59□□□□□ -0.87
PRKAR1A-202ENST00000392710 ROBO2Q9HCK4 1378 aa9.59□□□□□ -0.87
PRKAR1A-202ENST00000392710 ZNF521Q96K83 1311 aa9.59□□□□□ -0.88
PRKAR1A-202ENST00000392710 FMN2Q9NZ56 1722 aa9.58□□□□□ -0.88
PRKAR1A-202ENST00000392710 SETD1BQ9UPS6 1966 aaKnown RBP9.58□□□□□ -0.88
PRKAR1A-202ENST00000392710 LRRC7Q96NW7 1537 aa9.58□□□□□ -0.88
PRKAR1A-202ENST00000392710 NCBP3Q53F19 620 aaKnown RBP9.58□□□□□ -0.88
PRKAR1A-202ENST00000392710 TBX22Q9Y458 520 aa9.58□□□□□ -0.88
PRKAR1A-202ENST00000392710 CGNL1Q0VF96 1302 aa9.57□□□□□ -0.88
PRKAR1A-202ENST00000392710 STAG3Q9UJ98 1225 aa9.57□□□□□ -0.88
PRKAR1A-202ENST00000392710 PNPLA6Q8IY17 1366 aa9.57□□□□□ -0.88
PRKAR1A-202ENST00000392710 MARF1Q9Y4F3 1742 aaKnown RBP9.56□□□□□ -0.88
PRKAR1A-202ENST00000392710 SSH2Q76I76 1423 aa9.56□□□□□ -0.88
PRKAR1A-202ENST00000392710 PDE3BQ13370 1112 aa9.56□□□□□ -0.88
PRKAR1A-202ENST00000392710 ERICH6BQ5W0A0 696 aa9.56□□□□□ -0.88
PRKAR1A-202ENST00000392710 CEBPAP49715 358 aaPredicted RBP9.56□□□□□ -0.88
PRKAR1A-202ENST00000392710 CABP2Q9NPB3 220 aa9.56□□□□□ -0.88
PRKAR1A-202ENST00000392710 EDC4Q6P2E9 1401 aaKnown RBP9.56□□□□□ -0.88
PRKAR1A-202ENST00000392710 CDK19Q9BWU1 502 aa9.55□□□□□ -0.88
PRKAR1A-202ENST00000392710 TRHP20396 242 aaPredicted RBP9.55□□□□□ -0.88
PRKAR1A-202ENST00000392710 WASLO00401 505 aaPredicted RBP9.55□□□□□ -0.88
PRKAR1A-202ENST00000392710 THEMISQ8N1K5 641 aaPredicted RBP9.55□□□□□ -0.88
PRKAR1A-202ENST00000392710 NUDCQ9Y266 331 aa9.55□□□□□ -0.88
PRKAR1A-202ENST00000392710 NKTRP30414 1462 aaKnown RBP9.54□□□□□ -0.88
PRKAR1A-202ENST00000392710 NGEFQ8N5V2 710 aa9.53□□□□□ -0.88
PRKAR1A-202ENST00000392710 STK26Q9P289 416 aa9.53□□□□□ -0.88
PRKAR1A-202ENST00000392710 ADAMTS8Q9UP79 889 aa9.53□□□□□ -0.88
PRKAR1A-202ENST00000392710 PPIP5K1Q6PFW1 1433 aa9.53□□□□□ -0.88
PRKAR1A-202ENST00000392710 WAPLQ7Z5K2 1190 aa9.53□□□□□ -0.88
PRKAR1A-202ENST00000392710 ANKARQ7Z5J8 1434 aa9.53□□□□□ -0.88
PRKAR1A-202ENST00000392710 MINK1Q8N4C8 1332 aaPredicted RBP9.53□□□□□ -0.88
PRKAR1A-202ENST00000392710 TRMT2AQ8IZ69 625 aaKnown RBP9.53□□□□□ -0.88
PRKAR1A-202ENST00000392710 PHF23Q9BUL5 403 aaPredicted RBP9.53□□□□□ -0.88
PRKAR1A-202ENST00000392710 RGPD8O14715 1765 aaPredicted RBP9.52□□□□□ -0.88
PRKAR1A-202ENST00000392710 AATKQ6ZMQ8 1374 aa9.52□□□□□ -0.88
PRKAR1A-202ENST00000392710 POGKQ9P215 609 aa9.52□□□□□ -0.89
PRKAR1A-202ENST00000392710 RGPD1P0DJD0 1748 aa9.52□□□□□ -0.89
PRKAR1A-202ENST00000392710 FYB1O15117 783 aa9.52□□□□□ -0.89
PRKAR1A-202ENST00000392710 TERF2IPQ9NYB0 399 aa9.52□□□□□ -0.89
PRKAR1A-202ENST00000392710 TXNDC2Q86VQ3 553 aa9.52□□□□□ -0.89
PRKAR1A-202ENST00000392710 PRR36Q9H6K5 1346 aa9.51□□□□□ -0.89
PRKAR1A-202ENST00000392710 MAP2P11137 1827 aaKnown RBP9.51□□□□□ -0.89
PRKAR1A-202ENST00000392710 EID1Q9Y6B2 187 aa9.51□□□□□ -0.89
PRKAR1A-202ENST00000392710 PLEKHG3A1L390 1219 aa9.5□□□□□ -0.89
PRKAR1A-202ENST00000392710 CDK12Q9NYV4 1490 aaPredicted RBP9.5□□□□□ -0.89
PRKAR1A-202ENST00000392710 OVOS2A0A0J9YW53 1432 aa9.5□□□□□ -0.89
PRKAR1A-202ENST00000392710 OVOS2Q6IE36 1432 aa9.5□□□□□ -0.89
PRKAR1A-202ENST00000392710 SRPK2P78362 688 aaKnown RBP9.49□□□□□ -0.89
PRKAR1A-202ENST00000392710 PIK3C2AO00443 1686 aa9.49□□□□□ -0.89
PRKAR1A-202ENST00000392710 CABP1Q9NZU7 370 aa9.49□□□□□ -0.89
PRKAR1A-202ENST00000392710 PHRF1Q9P1Y6 1649 aaKnown RBP9.49□□□□□ -0.89
PRKAR1A-202ENST00000392710 USP6P35125 1406 aa9.48□□□□□ -0.89
PRKAR1A-202ENST00000392710 MORC1Q86VD1 984 aa9.48□□□□□ -0.89
PRKAR1A-202ENST00000392710 CCDC61Q9Y6R9 512 aa9.48□□□□□ -0.89
PRKAR1A-202ENST00000392710 PEAK1Q9H792 1746 aa9.48□□□□□ -0.89
PRKAR1A-202ENST00000392710 USP31Q70CQ4 1352 aa9.48□□□□□ -0.89
PRKAR1A-202ENST00000392710 HDGFL2Q7Z4V5 671 aaPredicted RBP9.48□□□□□ -0.89
PRKAR1A-202ENST00000392710 NUDT16Q96DE0 195 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms