RNA–Protein interactions for RNA: ENST00000392686.6

KCNMB3-204, Transcript of potassium calcium-activated channel subfamily M regulatory beta subunit 3, humanhuman

TSL 1 (best)

Gene KCNMB3, Length 2,055 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3-204ENST00000392686 COG6Q9Y2V7 657 aa16.91■□□□□ 0.3
KCNMB3-204ENST00000392686 CANXP27824 592 aaKnown RBP16.9■□□□□ 0.3
KCNMB3-204ENST00000392686 PANK1Q8TE04 598 aa16.9■□□□□ 0.3
KCNMB3-204ENST00000392686 SEC24BO95487 1268 aa16.9■□□□□ 0.3
KCNMB3-204ENST00000392686 CFAP70Q5T0N1 1121 aa16.89■□□□□ 0.29
KCNMB3-204ENST00000392686 FAM43AQ8N2R8 423 aa16.89■□□□□ 0.29
KCNMB3-204ENST00000392686 PHF23Q9BUL5 403 aaPredicted RBP16.89■□□□□ 0.29
KCNMB3-204ENST00000392686 ABCA9Q8IUA7 1624 aa16.89■□□□□ 0.29
KCNMB3-204ENST00000392686 UGGT1Q9NYU2 1555 aa16.89■□□□□ 0.29
KCNMB3-204ENST00000392686 EFCAB6Q5THR3 1501 aa16.89■□□□□ 0.29
KCNMB3-204ENST00000392686 RARSP54136 660 aaKnown RBP16.88■□□□□ 0.29
KCNMB3-204ENST00000392686 ADGRF5Q8IZF2 1346 aa16.87■□□□□ 0.29
KCNMB3-204ENST00000392686 NSD3Q9BZ95 1437 aa16.87■□□□□ 0.29
KCNMB3-204ENST00000392686 RUNDC1Q96C34 613 aa16.87■□□□□ 0.29
KCNMB3-204ENST00000392686 GLIPR1L2Q4G1C9 344 aa16.86■□□□□ 0.29
KCNMB3-204ENST00000392686 WDR63Q8IWG1 891 aa16.86■□□□□ 0.29
KCNMB3-204ENST00000392686 AFAP1Q8N556 730 aa16.86■□□□□ 0.29
KCNMB3-204ENST00000392686 ANTXR1Q9H6X2 564 aa16.86■□□□□ 0.29
KCNMB3-204ENST00000392686 ADGRB3O60242 1522 aa16.86■□□□□ 0.29
KCNMB3-204ENST00000392686 NCBP3Q53F19 620 aaKnown RBP16.85■□□□□ 0.29
KCNMB3-204ENST00000392686 TBC1D32Q96NH3 1257 aa16.85■□□□□ 0.29
KCNMB3-204ENST00000392686 QRICH2Q9H0J4 1663 aa16.85■□□□□ 0.29
KCNMB3-204ENST00000392686 ZNF518AQ6AHZ1 1483 aa16.84■□□□□ 0.29
KCNMB3-204ENST00000392686 CCDC27Q2M243 656 aa16.84■□□□□ 0.29
KCNMB3-204ENST00000392686 LMTK2Q8IWU2 1503 aa16.84■□□□□ 0.29
KCNMB3-204ENST00000392686 PPRC1Q5VV67 1664 aaKnown RBP16.84■□□□□ 0.29
KCNMB3-204ENST00000392686 RSPH6AQ9H0K4 717 aa16.84■□□□□ 0.29
KCNMB3-204ENST00000392686 UPF2Q9HAU5 1272 aaKnown RBP16.84■□□□□ 0.29
KCNMB3-204ENST00000392686 ADGRB2O60241 1585 aa16.83■□□□□ 0.29
KCNMB3-204ENST00000392686 POGKQ9P215 609 aa16.83■□□□□ 0.28
KCNMB3-204ENST00000392686 PCDHB15Q9Y5E8 787 aa16.83■□□□□ 0.28
KCNMB3-204ENST00000392686 FANCAO15360 1455 aa16.82■□□□□ 0.28
KCNMB3-204ENST00000392686 ADGRL1O94910 1474 aa16.82■□□□□ 0.28
KCNMB3-204ENST00000392686 MORC1Q86VD1 984 aa16.82■□□□□ 0.28
KCNMB3-204ENST00000392686 PDZRN3Q9UPQ7 1066 aa16.82■□□□□ 0.28
KCNMB3-204ENST00000392686 RLBP1P12271 317 aa16.81■□□□□ 0.28
KCNMB3-204ENST00000392686 TCP11L2Q8N4U5 519 aa16.81■□□□□ 0.28
KCNMB3-204ENST00000392686 PPLO60437 1756 aa16.81■□□□□ 0.28
KCNMB3-204ENST00000392686 L1TD1Q5T7N2 865 aaKnown RBP16.81■□□□□ 0.28
KCNMB3-204ENST00000392686 SLKQ9H2G2 1235 aaPredicted RBP16.81■□□□□ 0.28
KCNMB3-204ENST00000392686 ADGRB1O14514 1584 aa16.8■□□□□ 0.28
KCNMB3-204ENST00000392686 RWDD1Q9H446 243 aaPredicted RBP16.8■□□□□ 0.28
KCNMB3-204ENST00000392686 KIF3BO15066 747 aa16.79■□□□□ 0.28
KCNMB3-204ENST00000392686 NOS1P29475 1434 aa16.79■□□□□ 0.28
KCNMB3-204ENST00000392686 TBC1D2Q9BYX2 928 aa16.79■□□□□ 0.28
KCNMB3-204ENST00000392686 TNNQ9UQP3 1299 aa16.78■□□□□ 0.28
KCNMB3-204ENST00000392686 RRP7AQ9Y3A4 280 aaKnown RBP16.78■□□□□ 0.28
KCNMB3-204ENST00000392686 MYH16Q9H6N6 1097 aa16.77■□□□□ 0.27
KCNMB3-204ENST00000392686 NSD2O96028 1365 aa16.76■□□□□ 0.27
KCNMB3-204ENST00000392686 MVPQ14764 893 aaKnown RBP16.76■□□□□ 0.27
KCNMB3-204ENST00000392686 NEUROD2Q15784 382 aa16.76■□□□□ 0.27
KCNMB3-204ENST00000392686 CT47B1P0C2W7 299 aaPredicted RBP16.76■□□□□ 0.27
KCNMB3-204ENST00000392686 CFAP53Q96M91 514 aa16.76■□□□□ 0.27
KCNMB3-204ENST00000392686 KIDINS220Q9ULH0 1771 aa16.75■□□□□ 0.27
KCNMB3-204ENST00000392686 PUS7Q96PZ0 661 aaKnown RBP16.73■□□□□ 0.27
KCNMB3-204ENST00000392686 BCL2L13Q9BXK5 485 aa16.73■□□□□ 0.27
KCNMB3-204ENST00000392686 SLC12A5Q9H2X9 1139 aa16.73■□□□□ 0.27
KCNMB3-204ENST00000392686 C14orf93Q9H972 538 aaKnown RBP16.73■□□□□ 0.27
KCNMB3-204ENST00000392686 MTHFSP49914 203 aa16.73■□□□□ 0.27
KCNMB3-204ENST00000392686 ZKSCAN2Q63HK3 967 aa16.73■□□□□ 0.27
KCNMB3-204ENST00000392686 TNNT2P45379 298 aaPredicted RBP16.71■□□□□ 0.27
KCNMB3-204ENST00000392686 ARHGEF28Q8N1W1 1705 aaKnown RBP16.71■□□□□ 0.27
KCNMB3-204ENST00000392686 DZIP1LQ8IYY4 767 aaKnown RBP16.71■□□□□ 0.27
KCNMB3-204ENST00000392686 ANKRD36BQ8N2N9 1353 aa16.71■□□□□ 0.26
KCNMB3-204ENST00000392686 GLI2P10070 1586 aa16.7■□□□□ 0.26
KCNMB3-204ENST00000392686 TULP4Q9NRJ4 1543 aa16.7■□□□□ 0.26
KCNMB3-204ENST00000392686 FSD2A1L4K1 749 aa16.7■□□□□ 0.26
KCNMB3-204ENST00000392686 HDAC1Q13547 482 aaPredicted RBP16.7■□□□□ 0.26
KCNMB3-204ENST00000392686 TRAK1Q9UPV9 953 aa16.7■□□□□ 0.26
KCNMB3-204ENST00000392686 MCM4P33991 863 aa16.69■□□□□ 0.26
KCNMB3-204ENST00000392686 CHMP5Q9NZZ3 219 aa16.69■□□□□ 0.26
KCNMB3-204ENST00000392686 FTSJ3Q8IY81 847 aaKnown RBP16.68■□□□□ 0.26
KCNMB3-204ENST00000392686 C22orf23Q9BZE7 217 aa16.68■□□□□ 0.26
KCNMB3-204ENST00000392686 DNAJC5Q9H3Z4 198 aa16.68■□□□□ 0.26
KCNMB3-204ENST00000392686 RRAGDQ9NQL2 400 aaPredicted RBP16.68■□□□□ 0.26
KCNMB3-204ENST00000392686 RPGRIP1LQ68CZ1 1315 aa16.67■□□□□ 0.26
KCNMB3-204ENST00000392686 GOLGA6L3A6NEY3 463 aa16.67■□□□□ 0.26
KCNMB3-204ENST00000392686 NPATQ14207 1427 aa16.67■□□□□ 0.26
KCNMB3-204ENST00000392686 COL3A1P02461 1466 aaPredicted RBP16.67■□□□□ 0.26
KCNMB3-204ENST00000392686 NCOA3Q9Y6Q9 1424 aa16.66■□□□□ 0.26
KCNMB3-204ENST00000392686 HECW2Q9P2P5 1572 aa16.66■□□□□ 0.26
KCNMB3-204ENST00000392686 DDX19BQ9UMR2 479 aa16.66■□□□□ 0.26
KCNMB3-204ENST00000392686 ANKRD26Q9UPS8 1709 aa16.65■□□□□ 0.26
KCNMB3-204ENST00000392686 CD109Q6YHK3 1445 aa16.65■□□□□ 0.26
KCNMB3-204ENST00000392686 U2AF1L5P0DN76 240 aaPredicted RBP16.65■□□□□ 0.26
KCNMB3-204ENST00000392686 U2AF1Q01081 240 aaKnown RBP eCLIP16.65■□□□□ 0.26
KCNMB3-204ENST00000392686 XRCC6P12956 609 aaKnown RBP eCLIP16.65■□□□□ 0.26
KCNMB3-204ENST00000392686 SMC5Q8IY18 1101 aa16.65■□□□□ 0.26
KCNMB3-204ENST00000392686 ABCC11Q96J66 1382 aa16.64■□□□□ 0.25
KCNMB3-204ENST00000392686 TRIM27P14373 513 aa16.64■□□□□ 0.25
KCNMB3-204ENST00000392686 MFAP1P55081 439 aaKnown RBP16.64■□□□□ 0.25
KCNMB3-204ENST00000392686 SMC4Q9NTJ3 1288 aa16.64■□□□□ 0.25
KCNMB3-204ENST00000392686 IL16Q14005 1332 aa16.64■□□□□ 0.25
KCNMB3-204ENST00000392686 EVC2Q86UK5 1308 aa16.64■□□□□ 0.25
KCNMB3-204ENST00000392686 PIK3C2BO00750 1634 aa16.64■□□□□ 0.25
KCNMB3-204ENST00000392686 FRMPD1Q5SYB0 1578 aa16.63■□□□□ 0.25
KCNMB3-204ENST00000392686 CAMSAP1Q5T5Y3 1602 aa16.63■□□□□ 0.25
KCNMB3-204ENST00000392686 PLEKHF1Q96S99 279 aa16.63■□□□□ 0.25
KCNMB3-204ENST00000392686 PODXL2Q9NZ53 605 aa16.63■□□□□ 0.25
KCNMB3-204ENST00000392686 EXOSC9Q06265 439 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms