RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 AMER1Q5JTC6 1135 aaPredicted RBP4.79□□□□□ -1.64
UBR3-202ENST00000392632 TEX35Q5T0J7 233 aa4.79□□□□□ -1.64
UBR3-202ENST00000392632 SOGA3Q5TF21 947 aa4.79□□□□□ -1.64
UBR3-202ENST00000392632 GAS2L2Q8NHY3 880 aa4.79□□□□□ -1.64
UBR3-202ENST00000392632 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.79□□□□□ -1.641e-6■■■■■ 33.2
UBR3-202ENST00000392632 DDX19BQ9UMR2 479 aa4.79□□□□□ -1.64
UBR3-202ENST00000392632 PTPRGP23470 1445 aa4.79□□□□□ -1.64
UBR3-202ENST00000392632 E9PSI1 815 aa4.78□□□□□ -1.64
UBR3-202ENST00000392632 TNIP1Q15025 636 aa4.78□□□□□ -1.64
UBR3-202ENST00000392632 PPP4R3AQ6IN85 833 aa4.78□□□□□ -1.64
UBR3-202ENST00000392632 NOL8Q76FK4 1167 aaKnown RBP4.78□□□□□ -1.64
UBR3-202ENST00000392632 VSIG10Q8N0Z9 540 aa4.78□□□□□ -1.64
UBR3-202ENST00000392632 ANO2Q9NQ90 1003 aa4.78□□□□□ -1.64
UBR3-202ENST00000392632 SENP3-EIF4A1A0A087X0R7 540 aa4.78□□□□□ -1.64
UBR3-202ENST00000392632 HSPA5P11021 654 aaKnown RBP4.78□□□□□ -1.64
UBR3-202ENST00000392632 HSP90B2PQ58FF3 399 aa4.78□□□□□ -1.64
UBR3-202ENST00000392632 JMYQ8N9B5 988 aa4.78□□□□□ -1.64
UBR3-202ENST00000392632 CAGE1Q8TC20 777 aa4.78□□□□□ -1.64
UBR3-202ENST00000392632 PNISRQ8TF01 805 aaKnown RBP4.78□□□□□ -1.64
UBR3-202ENST00000392632 CLUAP1Q96AJ1 413 aa4.78□□□□□ -1.64
UBR3-202ENST00000392632 MAGEC2Q9UBF1 373 aaPredicted RBP4.78□□□□□ -1.64
UBR3-202ENST00000392632 CCDC144AA2RUR9 1427 aa4.78□□□□□ -1.64
UBR3-202ENST00000392632 NEFHP12036 1026 aa4.78□□□□□ -1.64
UBR3-202ENST00000392632 SLC4A3P48751 1232 aa4.78□□□□□ -1.64
UBR3-202ENST00000392632 NLRP6P59044 892 aa4.78□□□□□ -1.64
UBR3-202ENST00000392632 ZSCAN25Q6NSZ9 544 aa4.78□□□□□ -1.64
UBR3-202ENST00000392632 HOMER1Q86YM7 354 aa4.78□□□□□ -1.64
UBR3-202ENST00000392632 CLASRPQ8N2M8 674 aaKnown RBP4.78□□□□□ -1.64
UBR3-202ENST00000392632 ARGLU1Q9NWB6 273 aaPredicted RBP4.78□□□□□ -1.64
UBR3-202ENST00000392632 HNRNPMP52272 730 aaKnown RBP eCLIP4.78□□□□□ -1.646e-7■■■■■ 33.7
UBR3-202ENST00000392632 STIM1Q13586 685 aa4.78□□□□□ -1.64
UBR3-202ENST00000392632 POGZQ7Z3K3 1410 aa4.77□□□□□ -1.65
UBR3-202ENST00000392632 SMG6Q86US8 1419 aaKnown RBP4.77□□□□□ -1.65
UBR3-202ENST00000392632 GNAI3P08754 354 aa4.77□□□□□ -1.65
UBR3-202ENST00000392632 GRIPAP1Q4V328 841 aa4.77□□□□□ -1.65
UBR3-202ENST00000392632 ANKRD45Q5TZF3 282 aa4.77□□□□□ -1.65
UBR3-202ENST00000392632 SMARCE1Q969G3 411 aa4.77□□□□□ -1.65
UBR3-202ENST00000392632 RBM42Q9BTD8 480 aaKnown RBP4.77□□□□□ -1.65
UBR3-202ENST00000392632 TSPYL4Q9UJ04 414 aa4.77□□□□□ -1.65
UBR3-202ENST00000392632 PDCP20941 246 aa4.77□□□□□ -1.65
UBR3-202ENST00000392632 RBM5P52756 815 aaKnown RBP eCLIP4.77□□□□□ -1.65
UBR3-202ENST00000392632 CCDC158Q5M9N0 1113 aa4.77□□□□□ -1.65
UBR3-202ENST00000392632 SASS6Q6UVJ0 657 aa4.77□□□□□ -1.65
UBR3-202ENST00000392632 MPHOSPH6Q99547 160 aaKnown RBP4.77□□□□□ -1.65
UBR3-202ENST00000392632 MINK1Q8N4C8 1332 aaPredicted RBP4.77□□□□□ -1.65
UBR3-202ENST00000392632 FYB1O15117 783 aa4.77□□□□□ -1.65
UBR3-202ENST00000392632 SLKQ9H2G2 1235 aaPredicted RBP4.77□□□□□ -1.65
UBR3-202ENST00000392632 ZNHIT6Q9NWK9 470 aaKnown RBP4.77□□□□□ -1.65
UBR3-202ENST00000392632 SMC3Q9UQE7 1217 aa4.77□□□□□ -1.65
UBR3-202ENST00000392632 ZNF652Q9Y2D9 606 aa4.77□□□□□ -1.65
UBR3-202ENST00000392632 NUTM2DQ5VT03 806 aaPredicted RBP4.77□□□□□ -1.65
UBR3-202ENST00000392632 ZSCAN29Q8IWY8 852 aaPredicted RBP4.77□□□□□ -1.65
UBR3-202ENST00000392632 TRIM22Q8IYM9 498 aa4.77□□□□□ -1.65
UBR3-202ENST00000392632 MPHOSPH8Q99549 860 aa4.77□□□□□ -1.65
UBR3-202ENST00000392632 FEZ1Q99689 392 aa4.77□□□□□ -1.65
UBR3-202ENST00000392632 SPG7Q9UQ90 795 aa4.77□□□□□ -1.65
UBR3-202ENST00000392632 NINLQ9Y2I6 1382 aa4.77□□□□□ -1.65
UBR3-202ENST00000392632 NOP2P46087 812 aaKnown RBP4.76□□□□□ -1.65
UBR3-202ENST00000392632 SEPT7Q16181 437 aaKnown RBP4.76□□□□□ -1.65
UBR3-202ENST00000392632 ANKLE2Q86XL3 938 aa4.76□□□□□ -1.65
UBR3-202ENST00000392632 CNNM1Q9NRU3 951 aa4.76□□□□□ -1.65
UBR3-202ENST00000392632 MYO15BQ96JP2 1530 aa4.76□□□□□ -1.65
UBR3-202ENST00000392632 UBTFL1P0CB47 393 aaPredicted RBP4.76□□□□□ -1.65
UBR3-202ENST00000392632 ATP2B2Q01814 1243 aa4.76□□□□□ -1.65
UBR3-202ENST00000392632 ATF7IPQ6VMQ6 1270 aa4.76□□□□□ -1.65
UBR3-202ENST00000392632 DDX49Q9Y6V7 483 aaKnown RBP4.76□□□□□ -1.65
UBR3-202ENST00000392632 PATL2C9JE40 543 aaKnown RBP4.76□□□□□ -1.65
UBR3-202ENST00000392632 ELL2O00472 640 aaPredicted RBP4.76□□□□□ -1.65
UBR3-202ENST00000392632 CCDC57Q2TAC2 916 aa4.76□□□□□ -1.65
UBR3-202ENST00000392632 CCDC112Q8NEF3 446 aa4.76□□□□□ -1.65
UBR3-202ENST00000392632 PRDM11Q9NQV5 511 aa4.76□□□□□ -1.65
UBR3-202ENST00000392632 CECR2Q9BXF3 1484 aa4.76□□□□□ -1.65
UBR3-202ENST00000392632 KIF7Q2M1P5 1343 aa4.76□□□□□ -1.65
UBR3-202ENST00000392632 NUTM2BA6NNL0 878 aaPredicted RBP4.76□□□□□ -1.65
UBR3-202ENST00000392632 NUTM2EB1AL46 878 aaPredicted RBP4.76□□□□□ -1.65
UBR3-202ENST00000392632 CCP110O43303 1012 aa4.76□□□□□ -1.65
UBR3-202ENST00000392632 SMC2O95347 1197 aa4.76□□□□□ -1.65
UBR3-202ENST00000392632 RABEP1Q15276 862 aa4.76□□□□□ -1.65
UBR3-202ENST00000392632 TOM1L2Q6ZVM7 507 aa4.76□□□□□ -1.65
UBR3-202ENST00000392632 TXNDC2Q86VQ3 553 aa4.76□□□□□ -1.65
UBR3-202ENST00000392632 NUTM2AQ8IVF1 878 aaPredicted RBP4.76□□□□□ -1.65
UBR3-202ENST00000392632 DRC1Q96MC2 740 aa4.76□□□□□ -1.65
UBR3-202ENST00000392632 SDF4Q9BRK5 362 aa4.76□□□□□ -1.65
UBR3-202ENST00000392632 RRP7AQ9Y3A4 280 aaKnown RBP4.76□□□□□ -1.65
UBR3-202ENST00000392632 TDRD9Q8NDG6 1382 aaKnown RBP4.75□□□□□ -1.65
UBR3-202ENST00000392632 PPP1R12BO60237 982 aaPredicted RBP4.75□□□□□ -1.65
UBR3-202ENST00000392632 TTLL12Q14166 644 aaPredicted RBP4.75□□□□□ -1.65
UBR3-202ENST00000392632 CCDC30Q5VVM6 783 aa4.75□□□□□ -1.65
UBR3-202ENST00000392632 INTS3Q68E01 1043 aaKnown RBP4.75□□□□□ -1.65
UBR3-202ENST00000392632 SLF2Q8IX21 1173 aa4.75□□□□□ -1.65
UBR3-202ENST00000392632 MNS1Q8NEH6 495 aa4.75□□□□□ -1.65
UBR3-202ENST00000392632 NOL7Q9UMY1 257 aaKnown RBP4.75□□□□□ -1.65
UBR3-202ENST00000392632 PLIN1O60240 522 aa4.75□□□□□ -1.65
UBR3-202ENST00000392632 NUCB2P80303 420 aa4.75□□□□□ -1.65
UBR3-202ENST00000392632 SCLT1Q96NL6 688 aa4.75□□□□□ -1.65
UBR3-202ENST00000392632 STRN4Q9NRL3 753 aa4.75□□□□□ -1.65
UBR3-202ENST00000392632 KIF15Q9NS87 1388 aa4.75□□□□□ -1.65
UBR3-202ENST00000392632 PABPN1LA6NDY0 278 aaKnown RBP4.75□□□□□ -1.65
UBR3-202ENST00000392632 EPB41L2O43491 1005 aaKnown RBP4.75□□□□□ -1.65
UBR3-202ENST00000392632 EHMT1Q9H9B1 1298 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms