RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 NUDCQ9Y266 331 aa26.9■■□□□ 1.9
PTPN11-202ENST00000392597 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.89■■□□□ 1.89
PTPN11-202ENST00000392597 ERICH6BQ5W0A0 696 aa26.88■■□□□ 1.89
PTPN11-202ENST00000392597 TMEM2Q9UHN6 1383 aa26.88■■□□□ 1.89
PTPN11-202ENST00000392597 NINLQ9Y2I6 1382 aa26.88■■□□□ 1.89
PTPN11-202ENST00000392597 SLIT1O75093 1534 aa26.88■■□□□ 1.89
PTPN11-202ENST00000392597 SETD1AO15047 1707 aaKnown RBP26.88■■□□□ 1.89
PTPN11-202ENST00000392597 DLC1Q96QB1 1528 aa26.87■■□□□ 1.89
PTPN11-202ENST00000392597 ARHGAP23Q9P227 1491 aa26.87■■□□□ 1.89
PTPN11-202ENST00000392597 NSD3Q9BZ95 1437 aa26.85■■□□□ 1.89
PTPN11-202ENST00000392597 STK26Q9P289 416 aa26.84■■□□□ 1.89
PTPN11-202ENST00000392597 SLC12A5Q9H2X9 1139 aa26.83■■□□□ 1.89
PTPN11-202ENST00000392597 ANKRD36BQ8N2N9 1353 aa26.83■■□□□ 1.89
PTPN11-202ENST00000392597 PDE3BQ13370 1112 aa26.83■■□□□ 1.88
PTPN11-202ENST00000392597 HDGFP51858 240 aaKnown RBP26.82■■□□□ 1.88
PTPN11-202ENST00000392597 NRXN3Q9Y4C0 1643 aa26.81■■□□□ 1.88
PTPN11-202ENST00000392597 PRAM1Q96QH2 718 aa26.8■■□□□ 1.88
PTPN11-202ENST00000392597 ATAD2Q6PL18 1390 aa26.8■■□□□ 1.88
PTPN11-202ENST00000392597 BCANQ96GW7 911 aa26.79■■□□□ 1.88
PTPN11-202ENST00000392597 POGKQ9P215 609 aa26.79■■□□□ 1.88
PTPN11-202ENST00000392597 WDR43Q15061 677 aaKnown RBP eCLIP26.78■■□□□ 1.88
PTPN11-202ENST00000392597 NSD2O96028 1365 aa26.77■■□□□ 1.88
PTPN11-202ENST00000392597 ABCC11Q96J66 1382 aa26.77■■□□□ 1.88
PTPN11-202ENST00000392597 CGNL1Q0VF96 1302 aa26.77■■□□□ 1.88
PTPN11-202ENST00000392597 EID1Q9Y6B2 187 aa26.76■■□□□ 1.88
PTPN11-202ENST00000392597 CABP2Q9NPB3 220 aa26.76■■□□□ 1.87
PTPN11-202ENST00000392597 ADAMTS8Q9UP79 889 aa26.76■■□□□ 1.87
PTPN11-202ENST00000392597 SAFB2Q14151 953 aaKnown RBP eCLIP26.75■■□□□ 1.87
PTPN11-202ENST00000392597 AEBP2Q6ZN18 517 aaPredicted RBP26.75■■□□□ 1.87
PTPN11-202ENST00000392597 RNF123Q5XPI4 1314 aa26.75■■□□□ 1.87
PTPN11-202ENST00000392597 LTKP29376 864 aa26.74■■□□□ 1.87
PTPN11-202ENST00000392597 HSPA2P54652 639 aa26.74■■□□□ 1.87
PTPN11-202ENST00000392597 TXNDC2Q86VQ3 553 aa26.74■■□□□ 1.87
PTPN11-202ENST00000392597 ANKLE2Q86XL3 938 aa26.74■■□□□ 1.87
PTPN11-202ENST00000392597 POLR3AO14802 1390 aaPredicted RBP26.73■■□□□ 1.87
PTPN11-202ENST00000392597 SENP3Q9H4L4 574 aaPredicted RBP26.72■■□□□ 1.87
PTPN11-202ENST00000392597 KNDC1Q76NI1 1749 aa26.72■■□□□ 1.87
PTPN11-202ENST00000392597 SRPK2P78362 688 aaKnown RBP26.72■■□□□ 1.87
PTPN11-202ENST00000392597 MINK1Q8N4C8 1332 aaPredicted RBP26.72■■□□□ 1.87
PTPN11-202ENST00000392597 MORC1Q86VD1 984 aa26.71■■□□□ 1.87
PTPN11-202ENST00000392597 PLEKHG1Q9ULL1 1385 aa26.69■■□□□ 1.86
PTPN11-202ENST00000392597 TECPR2O15040 1411 aa26.69■■□□□ 1.86
PTPN11-202ENST00000392597 MED14O60244 1454 aa26.68■■□□□ 1.86
PTPN11-202ENST00000392597 SIRT1Q96EB6 747 aa26.68■■□□□ 1.86
PTPN11-202ENST00000392597 A0A1W2PP64 1363 aa26.67■■□□□ 1.86
PTPN11-202ENST00000392597 SENP3-EIF4A1A0A087X0R7 540 aa26.67■■□□□ 1.86
PTPN11-202ENST00000392597 IRX6P78412 446 aaPredicted RBP26.66■■□□□ 1.86
PTPN11-202ENST00000392597 TERF2IPQ9NYB0 399 aa26.66■■□□□ 1.86
PTPN11-202ENST00000392597 FAM135BQ49AJ0 1406 aa26.66■■□□□ 1.86
PTPN11-202ENST00000392597 METP08581 1390 aa26.66■■□□□ 1.86
PTPN11-202ENST00000392597 CDK19Q9BWU1 502 aa26.64■■□□□ 1.86
PTPN11-202ENST00000392597 CPS1P31327 1500 aa26.64■■□□□ 1.86
PTPN11-202ENST00000392597 PPP4R2Q9NY27 417 aa26.64■■□□□ 1.85
PTPN11-202ENST00000392597 STRCQ7RTU9 1775 aa26.64■■□□□ 1.85
PTPN11-202ENST00000392597 CD163L1Q9NR16 1453 aa26.63■■□□□ 1.85
PTPN11-202ENST00000392597 SALL2Q9Y467 1007 aaPredicted RBP26.62■■□□□ 1.85
PTPN11-202ENST00000392597 NCKAP5LQ9HCH0 1330 aa26.62■■□□□ 1.85
PTPN11-202ENST00000392597 NPHP4O75161 1426 aaPredicted RBP26.62■■□□□ 1.85
PTPN11-202ENST00000392597 ANKRD26Q9UPS8 1709 aa26.61■■□□□ 1.85
PTPN11-202ENST00000392597 PLEKHH1Q9ULM0 1364 aa26.6■■□□□ 1.85
PTPN11-202ENST00000392597 NGEFQ8N5V2 710 aa26.6■■□□□ 1.85
PTPN11-202ENST00000392597 ATP7BP35670 1465 aa26.59■■□□□ 1.85
PTPN11-202ENST00000392597 SHPRHQ149N8 1683 aa26.59■■□□□ 1.85
PTPN11-202ENST00000392597 ADAMTS13Q76LX8 1427 aa26.59■■□□□ 1.85
PTPN11-202ENST00000392597 WAPLQ7Z5K2 1190 aa26.59■■□□□ 1.85
PTPN11-202ENST00000392597 DIP2AQ14689 1571 aa26.58■■□□□ 1.85
PTPN11-202ENST00000392597 HDGFL2Q7Z4V5 671 aaPredicted RBP26.58■■□□□ 1.85
PTPN11-202ENST00000392597 ZNF521Q96K83 1311 aa26.57■■□□□ 1.84
PTPN11-202ENST00000392597 CDCA7LQ96GN5 454 aa26.55■■□□□ 1.84
PTPN11-202ENST00000392597 RCAN3Q9UKA8 241 aa26.55■■□□□ 1.84
PTPN11-202ENST00000392597 CFAP53Q96M91 514 aa26.54■■□□□ 1.84
PTPN11-202ENST00000392597 WASLO00401 505 aaPredicted RBP26.53■■□□□ 1.84
PTPN11-202ENST00000392597 TBX22Q9Y458 520 aa26.53■■□□□ 1.84
PTPN11-202ENST00000392597 MTHFSP49914 203 aa26.52■■□□□ 1.84
PTPN11-202ENST00000392597 CABP1Q9NZU7 370 aa26.52■■□□□ 1.84
PTPN11-202ENST00000392597 KIF20BQ96Q89 1820 aa26.52■■□□□ 1.84
PTPN11-202ENST00000392597 TNNT2P45379 298 aaPredicted RBP26.51■■□□□ 1.83
PTPN11-202ENST00000392597 SLC26A8Q96RN1 970 aa26.51■■□□□ 1.83
PTPN11-202ENST00000392597 FYB1O15117 783 aa26.49■■□□□ 1.83
PTPN11-202ENST00000392597 DMRT2Q9Y5R5 561 aa26.49■■□□□ 1.83
PTPN11-202ENST00000392597 ADGRB2O60241 1585 aa26.49■■□□□ 1.83
PTPN11-202ENST00000392597 RRP1P56182 461 aaKnown RBP26.49■■□□□ 1.83
PTPN11-202ENST00000392597 GOLGA2Q08379 1002 aa26.48■■□□□ 1.83
PTPN11-202ENST00000392597 CCDC146Q8IYE0 955 aa26.47■■□□□ 1.83
PTPN11-202ENST00000392597 PIK3R4Q99570 1358 aa26.47■■□□□ 1.83
PTPN11-202ENST00000392597 APAF1O14727 1248 aa26.47■■□□□ 1.83
PTPN11-202ENST00000392597 CPSF1Q10570 1443 aaKnown RBP26.46■■□□□ 1.83
PTPN11-202ENST00000392597 ROBO2Q9HCK4 1378 aa26.45■■□□□ 1.82
PTPN11-202ENST00000392597 GGNBP2Q9H3C7 697 aa26.45■■□□□ 1.82
PTPN11-202ENST00000392597 PPIP5K1Q6PFW1 1433 aa26.44■■□□□ 1.82
PTPN11-202ENST00000392597 DUSP27Q5VZP5 1158 aa26.43■■□□□ 1.82
PTPN11-202ENST00000392597 EDC4Q6P2E9 1401 aaKnown RBP26.43■■□□□ 1.82
PTPN11-202ENST00000392597 CDC42BPGQ6DT37 1551 aa26.43■■□□□ 1.82
PTPN11-202ENST00000392597 RUNDC1Q96C34 613 aa26.42■■□□□ 1.82
PTPN11-202ENST00000392597 SLFN5Q08AF3 891 aa26.41■■□□□ 1.82
PTPN11-202ENST00000392597 TRMT2AQ8IZ69 625 aaKnown RBP26.41■■□□□ 1.82
PTPN11-202ENST00000392597 IQSEC2Q5JU85 1478 aa26.41■■□□□ 1.82
PTPN11-202ENST00000392597 NCBP3Q53F19 620 aaKnown RBP26.4■■□□□ 1.82
PTPN11-202ENST00000392597 NUDT16Q96DE0 195 aaKnown RBP26.4■■□□□ 1.82
PTPN11-202ENST00000392597 TSHZ2Q9NRE2 1034 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms