RNA–Protein interactions for RNA: ENST00000391171.1

RNU1-101P-201, Transcript of RNA, U1 small nuclear 101, pseudogene, humanhuman

BASIC

Gene RNU1-101P, Length 127 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-101P-201ENST00000391171 FOXD4L3Q6VB84 417 aaPredicted RBP4.22□□□□□ -1.73
RNU1-101P-201ENST00000391171 SLC43A3Q8NBI5 491 aa4.22□□□□□ -1.73
RNU1-101P-201ENST00000391171 SPACA7Q96KW9 195 aa4.22□□□□□ -1.73
RNU1-101P-201ENST00000391171 LNPKQ9C0E8 428 aa4.22□□□□□ -1.73
RNU1-101P-201ENST00000391171 NLRP2Q9NX02 1062 aa4.22□□□□□ -1.73
RNU1-101P-201ENST00000391171 CHPF2Q9P2E5 772 aa4.22□□□□□ -1.73
RNU1-101P-201ENST00000391171 TBX22Q9Y458 520 aa4.22□□□□□ -1.73
RNU1-101P-201ENST00000391171 RPS6KL1Q9Y6S9 549 aa4.22□□□□□ -1.73
RNU1-101P-201ENST00000391171 ZRANB2O95218 330 aaKnown RBP eCLIP4.21□□□□□ -1.74
RNU1-101P-201ENST00000391171 SOGA3Q5TF21 947 aa4.21□□□□□ -1.74
RNU1-101P-201ENST00000391171 CHADLQ6NUI6 762 aa4.21□□□□□ -1.74
RNU1-101P-201ENST00000391171 RINLQ6ZS11 566 aa4.21□□□□□ -1.74
RNU1-101P-201ENST00000391171 PCGF5Q86SE9 256 aa4.21□□□□□ -1.74
RNU1-101P-201ENST00000391171 CDAN1Q8IWY9 1227 aa4.21□□□□□ -1.74
RNU1-101P-201ENST00000391171 IPO4Q8TEX9 1081 aaKnown RBP4.21□□□□□ -1.74
RNU1-101P-201ENST00000391171 PMM1Q92871 262 aa4.21□□□□□ -1.74
RNU1-101P-201ENST00000391171 SPOCK3Q9BQ16 436 aa4.21□□□□□ -1.74
RNU1-101P-201ENST00000391171 QTRT2Q9H974 415 aaKnown RBP4.21□□□□□ -1.74
RNU1-101P-201ENST00000391171 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.21□□□□□ -1.74
RNU1-101P-201ENST00000391171 SWAP70Q9UH65 585 aa4.21□□□□□ -1.74
RNU1-101P-201ENST00000391171 NCKAP5LQ9HCH0 1330 aa4.21□□□□□ -1.74
RNU1-101P-201ENST00000391171 POTEJP0CG39 1038 aa4.2□□□□□ -1.74
RNU1-101P-201ENST00000391171 ERCC5P28715 1186 aaPredicted RBP4.2□□□□□ -1.74
RNU1-101P-201ENST00000391171 COL19A1Q14993 1142 aa4.2□□□□□ -1.74
RNU1-101P-201ENST00000391171 GLIPR1L2Q4G1C9 344 aa4.2□□□□□ -1.74
RNU1-101P-201ENST00000391171 NOM1Q5C9Z4 860 aaKnown RBP4.2□□□□□ -1.74
RNU1-101P-201ENST00000391171 AMOTL1Q8IY63 956 aa4.2□□□□□ -1.74
RNU1-101P-201ENST00000391171 RELTQ969Z4 430 aa4.2□□□□□ -1.74
RNU1-101P-201ENST00000391171 DDX27Q96GQ7 796 aaKnown RBP4.2□□□□□ -1.74
RNU1-101P-201ENST00000391171 MFRPQ9BY79 579 aa4.2□□□□□ -1.74
RNU1-101P-201ENST00000391171 PPP1R12CQ9BZL4 782 aa4.2□□□□□ -1.74
RNU1-101P-201ENST00000391171 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.2□□□□□ -1.74
RNU1-101P-201ENST00000391171 GNL3LQ9NVN8 582 aaKnown RBP4.2□□□□□ -1.74
RNU1-101P-201ENST00000391171 CCER2I3L3R5 266 aa4.19□□□□□ -1.74
RNU1-101P-201ENST00000391171 GNPATO15228 680 aa4.19□□□□□ -1.74
RNU1-101P-201ENST00000391171 HSD3B2P26439 372 aa4.19□□□□□ -1.74
RNU1-101P-201ENST00000391171 COPB2P35606 906 aa4.19□□□□□ -1.74
RNU1-101P-201ENST00000391171 FOSBP53539 338 aa4.19□□□□□ -1.74
RNU1-101P-201ENST00000391171 FOXD4Q12950 439 aaPredicted RBP4.19□□□□□ -1.74
RNU1-101P-201ENST00000391171 ELOAQ14241 798 aaKnown RBP4.19□□□□□ -1.74
RNU1-101P-201ENST00000391171 HIC1Q14526 733 aa4.19□□□□□ -1.74
RNU1-101P-201ENST00000391171 RNF187Q5TA31 235 aaPredicted RBP4.19□□□□□ -1.74
RNU1-101P-201ENST00000391171 PPP2R2DQ66LE6 453 aa4.19□□□□□ -1.74
RNU1-101P-201ENST00000391171 CXorf38Q8TB03 319 aa4.19□□□□□ -1.74
RNU1-101P-201ENST00000391171 SECISBP2LQ93073 1101 aaKnown RBP4.19□□□□□ -1.74
RNU1-101P-201ENST00000391171 EVI5LQ96CN4 794 aa4.19□□□□□ -1.74
RNU1-101P-201ENST00000391171 LARP6Q9BRS8 491 aaKnown RBP4.19□□□□□ -1.74
RNU1-101P-201ENST00000391171 TMUB1Q9BVT8 246 aa4.19□□□□□ -1.74
RNU1-101P-201ENST00000391171 CRISPLD2Q9H0B8 497 aa4.19□□□□□ -1.74
RNU1-101P-201ENST00000391171 GDPD2Q9HCC8 539 aa4.19□□□□□ -1.74
RNU1-101P-201ENST00000391171 SNRKQ9NRH2 765 aa4.19□□□□□ -1.74
RNU1-101P-201ENST00000391171 CLEC11AQ9Y240 323 aa4.19□□□□□ -1.74
RNU1-101P-201ENST00000391171 POM121CA8CG34 1229 aa4.18□□□□□ -1.74
RNU1-101P-201ENST00000391171 RGS20O76081 388 aa4.18□□□□□ -1.74
RNU1-101P-201ENST00000391171 C7P10643 843 aa4.18□□□□□ -1.74
RNU1-101P-201ENST00000391171 PAX3P23760 479 aa4.18□□□□□ -1.74
RNU1-101P-201ENST00000391171 RFC5P40937 340 aa4.18□□□□□ -1.74
RNU1-101P-201ENST00000391171 PPP4CP60510 307 aa4.18□□□□□ -1.74
RNU1-101P-201ENST00000391171 MMRN1Q13201 1228 aa4.18□□□□□ -1.74
RNU1-101P-201ENST00000391171 PDIA6Q15084 440 aa4.18□□□□□ -1.74
RNU1-101P-201ENST00000391171 FAM161AQ3B820 660 aa4.18□□□□□ -1.74
RNU1-101P-201ENST00000391171 ZNF467Q7Z7K2 595 aaPredicted RBP4.18□□□□□ -1.74
RNU1-101P-201ENST00000391171 FTSJ3Q8IY81 847 aaKnown RBP4.18□□□□□ -1.74
RNU1-101P-201ENST00000391171 FAM9BQ8IZU0 186 aa4.18□□□□□ -1.74
RNU1-101P-201ENST00000391171 PIK3R5Q8WYR1 880 aa4.18□□□□□ -1.74
RNU1-101P-201ENST00000391171 TANGO6Q9C0B7 1094 aa4.18□□□□□ -1.74
RNU1-101P-201ENST00000391171 IRF2BPLQ9H1B7 796 aa4.18□□□□□ -1.74
RNU1-101P-201ENST00000391171 NUB1Q9Y5A7 615 aa4.18□□□□□ -1.74
RNU1-101P-201ENST00000391171 SOWAHDA6NJG2 315 aa4.17□□□□□ -1.74
RNU1-101P-201ENST00000391171 SCAMP3O14828 347 aaKnown RBP4.17□□□□□ -1.74
RNU1-101P-201ENST00000391171 NRDCO43847 1150 aa4.17□□□□□ -1.74
RNU1-101P-201ENST00000391171 LZTS3O60299 673 aaPredicted RBP4.17□□□□□ -1.74
RNU1-101P-201ENST00000391171 CD44P16070 742 aaKnown RBP4.17□□□□□ -1.74
RNU1-101P-201ENST00000391171 MAN1A1P33908 653 aa4.17□□□□□ -1.74
RNU1-101P-201ENST00000391171 CLCN1P35523 988 aa4.17□□□□□ -1.74
RNU1-101P-201ENST00000391171 RBL2Q08999 1139 aa4.17□□□□□ -1.74
RNU1-101P-201ENST00000391171 WASHC4Q2M389 1173 aa4.17□□□□□ -1.74
RNU1-101P-201ENST00000391171 CCDC144BQ3MJ40 725 aa4.17□□□□□ -1.74
RNU1-101P-201ENST00000391171 CCSAPQ6IQ19 270 aaPredicted RBP4.17□□□□□ -1.74
RNU1-101P-201ENST00000391171 ZNF280DQ6N043 979 aa4.17□□□□□ -1.74
RNU1-101P-201ENST00000391171 CASC1Q6TDU7 716 aa4.17□□□□□ -1.74
RNU1-101P-201ENST00000391171 FBXO33Q7Z6M2 555 aa4.17□□□□□ -1.74
RNU1-101P-201ENST00000391171 CCDC146Q8IYE0 955 aa4.17□□□□□ -1.74
RNU1-101P-201ENST00000391171 MTMR14Q8NCE2 650 aa4.17□□□□□ -1.74
RNU1-101P-201ENST00000391171 SNRNP27Q8WVK2 155 aaKnown RBP4.17□□□□□ -1.74
RNU1-101P-201ENST00000391171 ZNF622Q969S3 477 aaKnown RBP eCLIP4.17□□□□□ -1.74
RNU1-101P-201ENST00000391171 GMLQ99445 158 aa4.17□□□□□ -1.74
RNU1-101P-201ENST00000391171 TRIM34Q9BYJ4 488 aa4.17□□□□□ -1.74
RNU1-101P-201ENST00000391171 TYW1Q9NV66 732 aaKnown RBP4.17□□□□□ -1.74
RNU1-101P-201ENST00000391171 NAP1L2Q9ULW6 460 aaPredicted RBP4.17□□□□□ -1.74
RNU1-101P-201ENST00000391171 ANKRD33BA6NCL7 494 aa4.16□□□□□ -1.74
RNU1-101P-201ENST00000391171 CLGNO14967 610 aa4.16□□□□□ -1.74
RNU1-101P-201ENST00000391171 HOXA2O43364 376 aa4.16□□□□□ -1.74
RNU1-101P-201ENST00000391171 VIL1P09327 827 aaKnown RBP4.16□□□□□ -1.74
RNU1-101P-201ENST00000391171 ATP2B1P20020 1258 aa4.16□□□□□ -1.74
RNU1-101P-201ENST00000391171 RFX1P22670 979 aa4.16□□□□□ -1.74
RNU1-101P-201ENST00000391171 BDNFP23560 247 aa4.16□□□□□ -1.74
RNU1-101P-201ENST00000391171 ITGAEP38570 1179 aa4.16□□□□□ -1.74
RNU1-101P-201ENST00000391171 TBX4P57082 545 aa4.16□□□□□ -1.74
RNU1-101P-201ENST00000391171 FAM193AP78312 1265 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms