RNA–Protein interactions for RNA: ENST00000390996.1

RNU6-1009P-201, Transcript of RNA, U6 small nuclear 1009, pseudogene, humanhuman

BASIC

Gene RNU6-1009P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1009P-201ENST00000390996 MINK1Q8N4C8 1332 aaPredicted RBP8.9□□□□□ -0.98
RNU6-1009P-201ENST00000390996 KDM4AO75164 1064 aa8.9□□□□□ -0.98
RNU6-1009P-201ENST00000390996 MDM2Q00987 491 aaPredicted RBP8.9□□□□□ -0.98
RNU6-1009P-201ENST00000390996 DXOO77932 396 aaKnown RBP8.89□□□□□ -0.99
RNU6-1009P-201ENST00000390996 HLA-CQ95604 372 aa8.89□□□□□ -0.99
RNU6-1009P-201ENST00000390996 DACH1Q9UI36 760 aa8.89□□□□□ -0.99
RNU6-1009P-201ENST00000390996 CYP4X1Q8N118 509 aa8.88□□□□□ -0.99
RNU6-1009P-201ENST00000390996 CCDC102AQ96A19 550 aa8.88□□□□□ -0.99
RNU6-1009P-201ENST00000390996 WNT7AO00755 349 aa8.87□□□□□ -0.99
RNU6-1009P-201ENST00000390996 USP46P62068 366 aa8.87□□□□□ -0.99
RNU6-1009P-201ENST00000390996 TRIM32Q13049 653 aa8.87□□□□□ -0.99
RNU6-1009P-201ENST00000390996 VSIG10Q8N0Z9 540 aa8.87□□□□□ -0.99
RNU6-1009P-201ENST00000390996 USB1Q9BQ65 265 aaKnown RBP8.87□□□□□ -0.99
RNU6-1009P-201ENST00000390996 ZBTB24O43167 697 aaPredicted RBP8.86□□□□□ -0.99
RNU6-1009P-201ENST00000390996 HOXA2O43364 376 aa8.86□□□□□ -0.99
RNU6-1009P-201ENST00000390996 SMCPP49901 116 aaPredicted RBP8.86□□□□□ -0.99
RNU6-1009P-201ENST00000390996 LCE2AQ5TA79 106 aaPredicted RBP8.85□□□□□ -0.99
RNU6-1009P-201ENST00000390996 TULP1O00294 542 aaPredicted RBP8.84□□□□□ -0.99
RNU6-1009P-201ENST00000390996 SMPD1P17405 629 aa8.84□□□□□ -0.99
RNU6-1009P-201ENST00000390996 CTC1Q2NKJ3 1217 aa8.84□□□□□ -0.99
RNU6-1009P-201ENST00000390996 AXIN1O15169 862 aa8.83□□□□□ -1
RNU6-1009P-201ENST00000390996 GPCPD1Q9NPB8 672 aa8.83□□□□□ -1
RNU6-1009P-201ENST00000390996 FAM217BQ9NTX9 383 aaPredicted RBP8.83□□□□□ -1
RNU6-1009P-201ENST00000390996 TTC24A2A3L6 582 aaPredicted RBP8.82□□□□□ -1
RNU6-1009P-201ENST00000390996 GUCA2AQ02747 115 aa8.82□□□□□ -1
RNU6-1009P-201ENST00000390996 SNIP1Q8TAD8 396 aaKnown RBP8.82□□□□□ -1
RNU6-1009P-201ENST00000390996 MRGPRX2Q96LB1 330 aa8.82□□□□□ -1
RNU6-1009P-201ENST00000390996 GMPR2Q9P2T1 348 aaKnown RBP8.82□□□□□ -1
RNU6-1009P-201ENST00000390996 CLCN1P35523 988 aa8.81□□□□□ -1
RNU6-1009P-201ENST00000390996 SKOR1P84550 965 aa8.8□□□□□ -1
RNU6-1009P-201ENST00000390996 TREML4Q6UXN2 200 aa8.8□□□□□ -1
RNU6-1009P-201ENST00000390996 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.8□□□□□ -1
RNU6-1009P-201ENST00000390996 J3QL48 77 aa8.79□□□□□ -1
RNU6-1009P-201ENST00000390996 JUNDP17535 347 aa8.79□□□□□ -1
RNU6-1009P-201ENST00000390996 SYMPKQ92797 1274 aaKnown RBP8.79□□□□□ -1
RNU6-1009P-201ENST00000390996 REPIN1Q9BWE0 567 aaKnown RBP8.79□□□□□ -1
RNU6-1009P-201ENST00000390996 WNT7BP56706 349 aa8.77□□□□□ -1.01
RNU6-1009P-201ENST00000390996 CCDC24Q8N4L8 307 aa8.77□□□□□ -1.01
RNU6-1009P-201ENST00000390996 RC3H1Q5TC82 1133 aaKnown RBP8.76□□□□□ -1.01
RNU6-1009P-201ENST00000390996 PCDHGC3Q9UN70 934 aa8.76□□□□□ -1.01
RNU6-1009P-201ENST00000390996 C11orf95C9JLR9 678 aaPredicted RBP8.75□□□□□ -1.01
RNU6-1009P-201ENST00000390996 RETREG3Q86VR2 466 aa8.75□□□□□ -1.01
RNU6-1009P-201ENST00000390996 NUTM1Q86Y26 1132 aa8.75□□□□□ -1.01
RNU6-1009P-201ENST00000390996 ATP13A2Q9NQ11 1180 aa8.75□□□□□ -1.01
RNU6-1009P-201ENST00000390996 PTCRAQ6ISU1 281 aaPredicted RBP8.74□□□□□ -1.01
RNU6-1009P-201ENST00000390996 HPS1Q92902 700 aa8.74□□□□□ -1.01
RNU6-1009P-201ENST00000390996 FDX1P10109 184 aa8.72□□□□□ -1.01
RNU6-1009P-201ENST00000390996 NUDT12Q9BQG2 462 aa8.72□□□□□ -1.01
RNU6-1009P-201ENST00000390996 SIAH2O43255 324 aa8.71□□□□□ -1.02
RNU6-1009P-201ENST00000390996 SNRPBP14678 240 aaKnown RBP8.71□□□□□ -1.02
RNU6-1009P-201ENST00000390996 SSTR3P32745 418 aaPredicted RBP8.71□□□□□ -1.02
RNU6-1009P-201ENST00000390996 NFX1Q12986 1120 aaKnown RBP8.71□□□□□ -1.02
RNU6-1009P-201ENST00000390996 BARGINQ6ZT62 677 aa8.71□□□□□ -1.02
RNU6-1009P-201ENST00000390996 KRI1Q8N9T8 703 aaKnown RBP8.71□□□□□ -1.02
RNU6-1009P-201ENST00000390996 SPIRE2Q8WWL2 714 aa8.71□□□□□ -1.02
RNU6-1009P-201ENST00000390996 ZMYND10O75800 440 aa8.7□□□□□ -1.02
RNU6-1009P-201ENST00000390996 AMHR2Q16671 573 aa8.7□□□□□ -1.02
RNU6-1009P-201ENST00000390996 TRIM47Q96LD4 638 aa8.7□□□□□ -1.02
RNU6-1009P-201ENST00000390996 WFS1O76024 890 aa8.69□□□□□ -1.02
RNU6-1009P-201ENST00000390996 NDUFV2P19404 249 aa8.69□□□□□ -1.02
RNU6-1009P-201ENST00000390996 C6orf229H3BNL8 230 aa8.68□□□□□ -1.02
RNU6-1009P-201ENST00000390996 MS4A1P11836 297 aa8.68□□□□□ -1.02
RNU6-1009P-201ENST00000390996 LCE2CQ5TA81 110 aa8.68□□□□□ -1.02
RNU6-1009P-201ENST00000390996 MOXD2PA6NHM9 499 aa8.67□□□□□ -1.02
RNU6-1009P-201ENST00000390996 ALDH1A1P00352 501 aa8.67□□□□□ -1.02
RNU6-1009P-201ENST00000390996 CCNYL3P0C7X3 344 aa8.67□□□□□ -1.02
RNU6-1009P-201ENST00000390996 SH3BP2P78314 561 aa8.67□□□□□ -1.02
RNU6-1009P-201ENST00000390996 SENP2Q9HC62 589 aa8.67□□□□□ -1.02
RNU6-1009P-201ENST00000390996 PTPRNQ16849 979 aa8.66□□□□□ -1.02
RNU6-1009P-201ENST00000390996 TTLL12Q14166 644 aaPredicted RBP8.65□□□□□ -1.02
RNU6-1009P-201ENST00000390996 GIGYF2Q6Y7W6 1299 aaKnown RBP8.65□□□□□ -1.02
RNU6-1009P-201ENST00000390996 ZC3H15Q8WU90 426 aaKnown RBP8.65□□□□□ -1.02
RNU6-1009P-201ENST00000390996 EVA1BQ9NVM1 165 aa8.65□□□□□ -1.02
RNU6-1009P-201ENST00000390996 WIPF1O43516 503 aa8.64□□□□□ -1.03
RNU6-1009P-201ENST00000390996 EHBP1Q8NDI1 1231 aa8.64□□□□□ -1.03
RNU6-1009P-201ENST00000390996 UNC93B1Q9H1C4 597 aa8.64□□□□□ -1.03
RNU6-1009P-201ENST00000390996 DESI1Q6ICB0 168 aa8.63□□□□□ -1.03
RNU6-1009P-201ENST00000390996 PRR7Q8TB68 274 aa8.63□□□□□ -1.03
RNU6-1009P-201ENST00000390996 KIFC2Q96AC6 838 aa8.63□□□□□ -1.03
RNU6-1009P-201ENST00000390996 TERTO14746 1132 aaKnown RBP8.62□□□□□ -1.03
RNU6-1009P-201ENST00000390996 KCNH2Q12809 1159 aa8.62□□□□□ -1.03
RNU6-1009P-201ENST00000390996 BEGAINQ9BUH8 593 aa8.62□□□□□ -1.03
RNU6-1009P-201ENST00000390996 GJA5P36382 358 aa8.61□□□□□ -1.03
RNU6-1009P-201ENST00000390996 MTMR2Q13614 643 aa8.61□□□□□ -1.03
RNU6-1009P-201ENST00000390996 TRIM46Q7Z4K8 759 aa8.61□□□□□ -1.03
RNU6-1009P-201ENST00000390996 TBC1D2Q9BYX2 928 aa8.61□□□□□ -1.03
RNU6-1009P-201ENST00000390996 SPDYE5A6NIY4 337 aa8.6□□□□□ -1.03
RNU6-1009P-201ENST00000390996 RSBN1LQ6PCB5 846 aaPredicted RBP8.6□□□□□ -1.03
RNU6-1009P-201ENST00000390996 PARP9Q8IXQ6 854 aa8.6□□□□□ -1.03
RNU6-1009P-201ENST00000390996 BAP1Q92560 729 aa8.6□□□□□ -1.03
RNU6-1009P-201ENST00000390996 LINC01559Q495D7 138 aa8.59□□□□□ -1.03
RNU6-1009P-201ENST00000390996 ZNF511Q8NB15 262 aa8.59□□□□□ -1.03
RNU6-1009P-201ENST00000390996 WASF2Q9Y6W5 498 aa8.59□□□□□ -1.03
RNU6-1009P-201ENST00000390996 BMP1P13497 986 aa8.58□□□□□ -1.04
RNU6-1009P-201ENST00000390996 MPNDQ8N594 471 aa8.58□□□□□ -1.04
RNU6-1009P-201ENST00000390996 PCDHB15Q9Y5E8 787 aa8.58□□□□□ -1.04
RNU6-1009P-201ENST00000390996 TLL2Q9Y6L7 1015 aa8.58□□□□□ -1.04
RNU6-1009P-201ENST00000390996 CFAP99D6REC4 459 aa8.57□□□□□ -1.04
RNU6-1009P-201ENST00000390996 TRIM66O15016 1216 aa8.57□□□□□ -1.04
RNU6-1009P-201ENST00000390996 SPTLC1O15269 473 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms