RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 PALM3A6NDB9 673 aaPredicted RBP3.17□□□□□ -1.9
SNORA48.1-201ENST00000390879 TRIM6-TRIM34B2RNG4 842 aa3.17□□□□□ -1.9
SNORA48.1-201ENST00000390879 PPP1R3GB7ZBB8 358 aa3.17□□□□□ -1.9
SNORA48.1-201ENST00000390879 GPR37L1O60883 481 aa3.17□□□□□ -1.9
SNORA48.1-201ENST00000390879 BRD1O95696 1058 aa3.17□□□□□ -1.9
SNORA48.1-201ENST00000390879 PTPREP23469 700 aa3.17□□□□□ -1.9
SNORA48.1-201ENST00000390879 LMOD1P29536 600 aaPredicted RBP3.17□□□□□ -1.9
SNORA48.1-201ENST00000390879 GJA5P36382 358 aa3.17□□□□□ -1.9
SNORA48.1-201ENST00000390879 KCNA1Q09470 495 aa3.17□□□□□ -1.9
SNORA48.1-201ENST00000390879 WASHC4Q2M389 1173 aa3.17□□□□□ -1.9
SNORA48.1-201ENST00000390879 PROX2Q3B8N5 592 aa3.17□□□□□ -1.9
SNORA48.1-201ENST00000390879 PRPF38BQ5VTL8 546 aaKnown RBP3.17□□□□□ -1.9
SNORA48.1-201ENST00000390879 PACS2Q86VP3 889 aa3.17□□□□□ -1.9
SNORA48.1-201ENST00000390879 HELBQ8NG08 1087 aaPredicted RBP3.17□□□□□ -1.9
SNORA48.1-201ENST00000390879 EPS8L1Q8TE68 723 aa3.17□□□□□ -1.9
SNORA48.1-201ENST00000390879 TFIP11Q9UBB9 837 aaKnown RBP3.17□□□□□ -1.9
SNORA48.1-201ENST00000390879 PCDHGC3Q9UN70 934 aa3.17□□□□□ -1.9
SNORA48.1-201ENST00000390879 USTQ9Y2C2 406 aa3.17□□□□□ -1.9
SNORA48.1-201ENST00000390879 IVNS1ABPQ9Y6Y0 642 aa3.17□□□□□ -1.9
SNORA48.1-201ENST00000390879 PATL2C9JE40 543 aaKnown RBP3.16□□□□□ -1.9
SNORA48.1-201ENST00000390879 CFAP99D6REC4 459 aa3.16□□□□□ -1.9
SNORA48.1-201ENST00000390879 C6orf229H3BNL8 230 aa3.16□□□□□ -1.9
SNORA48.1-201ENST00000390879 HOXB3P14651 431 aaPredicted RBP3.16□□□□□ -1.9
SNORA48.1-201ENST00000390879 GCGRP47871 477 aa3.16□□□□□ -1.9
SNORA48.1-201ENST00000390879 MTMR2Q13614 643 aa3.16□□□□□ -1.9
SNORA48.1-201ENST00000390879 DOK7Q18PE1 504 aa3.16□□□□□ -1.9
SNORA48.1-201ENST00000390879 UCN2Q96RP3 112 aa3.16□□□□□ -1.9
SNORA48.1-201ENST00000390879 BCL2L12Q9HB09 334 aa3.16□□□□□ -1.9
SNORA48.1-201ENST00000390879 MYT1LQ9UL68 1186 aa3.16□□□□□ -1.9
SNORA48.1-201ENST00000390879 RIMBP2O15034 1052 aa3.15□□□□□ -1.91
SNORA48.1-201ENST00000390879 SLC10A3P09131 477 aa3.15□□□□□ -1.91
SNORA48.1-201ENST00000390879 USP46P62068 366 aa3.15□□□□□ -1.91
SNORA48.1-201ENST00000390879 SRPK2P78362 688 aaKnown RBP3.15□□□□□ -1.91
SNORA48.1-201ENST00000390879 SEMA3FQ13275 785 aa3.15□□□□□ -1.91
SNORA48.1-201ENST00000390879 CCDC27Q2M243 656 aa3.15□□□□□ -1.91
SNORA48.1-201ENST00000390879 SWT1Q5T5J6 900 aaKnown RBP3.15□□□□□ -1.91
SNORA48.1-201ENST00000390879 RSPH4AQ5TD94 716 aa3.15□□□□□ -1.91
SNORA48.1-201ENST00000390879 GPR153Q6NV75 609 aa3.15□□□□□ -1.91
SNORA48.1-201ENST00000390879 PRR7Q8TB68 274 aa3.15□□□□□ -1.91
SNORA48.1-201ENST00000390879 SYMPKQ92797 1274 aaKnown RBP3.15□□□□□ -1.91
SNORA48.1-201ENST00000390879 KCNK17Q96T54 332 aa3.15□□□□□ -1.91
SNORA48.1-201ENST00000390879 ALG2Q9H553 416 aa3.15□□□□□ -1.91
SNORA48.1-201ENST00000390879 SCUBE2Q9NQ36 999 aa3.15□□□□□ -1.91
SNORA48.1-201ENST00000390879 E9PSI1 815 aa3.14□□□□□ -1.91
SNORA48.1-201ENST00000390879 NR6A1Q15406 480 aa3.14□□□□□ -1.91
SNORA48.1-201ENST00000390879 TBC1D9Q6ZT07 1266 aa3.14□□□□□ -1.91
SNORA48.1-201ENST00000390879 VRTNQ9H8Y1 702 aa3.14□□□□□ -1.91
SNORA48.1-201ENST00000390879 KIAA1468Q9P260 1216 aa3.14□□□□□ -1.91
SNORA48.1-201ENST00000390879 SEPT9Q9UHD8 586 aaPredicted RBP3.14□□□□□ -1.91
SNORA48.1-201ENST00000390879 MAFBQ9Y5Q3 323 aaPredicted RBP3.14□□□□□ -1.91
SNORA48.1-201ENST00000390879 POTEB3A0JP26 581 aa3.13□□□□□ -1.91
SNORA48.1-201ENST00000390879 PSDA5PKW4 1024 aaPredicted RBP3.13□□□□□ -1.91
SNORA48.1-201ENST00000390879 TMEM88BA6NKF7 163 aa3.13□□□□□ -1.91
SNORA48.1-201ENST00000390879 PER1O15534 1290 aaPredicted RBP3.13□□□□□ -1.91
SNORA48.1-201ENST00000390879 IGSF3O75054 1194 aa3.13□□□□□ -1.91
SNORA48.1-201ENST00000390879 RNF40O75150 1001 aa3.13□□□□□ -1.91
SNORA48.1-201ENST00000390879 FUT2Q10981 343 aa3.13□□□□□ -1.91
SNORA48.1-201ENST00000390879 POTEBQ6S5H4 581 aa3.13□□□□□ -1.91
SNORA48.1-201ENST00000390879 ZSWIM6Q9HCJ5 1215 aa3.13□□□□□ -1.91
SNORA48.1-201ENST00000390879 PIK3CDO00329 1044 aa3.12□□□□□ -1.91
SNORA48.1-201ENST00000390879 ATG7O95352 703 aa3.12□□□□□ -1.91
SNORA48.1-201ENST00000390879 CFHP08603 1231 aa3.12□□□□□ -1.91
SNORA48.1-201ENST00000390879 SOX11P35716 441 aa3.12□□□□□ -1.91
SNORA48.1-201ENST00000390879 SND1Q7KZF4 910 aaKnown RBP eCLIP3.12□□□□□ -1.91
SNORA48.1-201ENST00000390879 SLF2Q8IX21 1173 aa3.12□□□□□ -1.91
SNORA48.1-201ENST00000390879 KCNH8Q96L42 1107 aa3.12□□□□□ -1.91
SNORA48.1-201ENST00000390879 LOC105371045A0A1W2PR82 267 aa3.11□□□□□ -1.91
SNORA48.1-201ENST00000390879 ATP9BO43861 1147 aa3.11□□□□□ -1.91
SNORA48.1-201ENST00000390879 SLC4A3P48751 1232 aa3.11□□□□□ -1.91
SNORA48.1-201ENST00000390879 PSEN2P49810 448 aa3.11□□□□□ -1.91
SNORA48.1-201ENST00000390879 HDGFP51858 240 aaKnown RBP3.11□□□□□ -1.91
SNORA48.1-201ENST00000390879 EIF4G2P78344 907 aaKnown RBP eCLIP3.11□□□□□ -1.91
SNORA48.1-201ENST00000390879 GRIPAP1Q4V328 841 aa3.11□□□□□ -1.91
SNORA48.1-201ENST00000390879 PNMA1Q8ND90 353 aa3.11□□□□□ -1.91
SNORA48.1-201ENST00000390879 STK32AQ8WU08 396 aa3.11□□□□□ -1.91
SNORA48.1-201ENST00000390879 MARVELD3Q96A59 401 aa3.11□□□□□ -1.91
SNORA48.1-201ENST00000390879 FBXO45P0C2W1 286 aa3.1□□□□□ -1.91
SNORA48.1-201ENST00000390879 SKIP12755 728 aa3.1□□□□□ -1.91
SNORA48.1-201ENST00000390879 ATP6V1AP38606 617 aa3.1□□□□□ -1.91
SNORA48.1-201ENST00000390879 PUS10Q3MIT2 529 aaKnown RBP3.1□□□□□ -1.91
SNORA48.1-201ENST00000390879 KANK4Q5T7N3 995 aaPredicted RBP3.1□□□□□ -1.91
SNORA48.1-201ENST00000390879 TMEM164Q5U3C3 297 aa3.1□□□□□ -1.91
SNORA48.1-201ENST00000390879 SAMD7Q7Z3H4 446 aa3.1□□□□□ -1.91
SNORA48.1-201ENST00000390879 DEPDC4Q8N2C3 294 aa3.1□□□□□ -1.91
SNORA48.1-201ENST00000390879 ZBED2Q9BTP6 218 aa3.1□□□□□ -1.91
SNORA48.1-201ENST00000390879 ZMIZ1Q9ULJ6 1067 aa3.1□□□□□ -1.91
SNORA48.1-201ENST00000390879 NOVA2Q9UNW9 492 aaKnown RBP3.1□□□□□ -1.91
SNORA48.1-201ENST00000390879 USP17L3A6NCW0 530 aa3.09□□□□□ -1.91
SNORA48.1-201ENST00000390879 USP17L4A6NCW7 530 aa3.09□□□□□ -1.91
SNORA48.1-201ENST00000390879 USP17L5A8MUK1 530 aa3.09□□□□□ -1.91
SNORA48.1-201ENST00000390879 NR1H3Q13133 447 aa3.09□□□□□ -1.91
SNORA48.1-201ENST00000390879 B4GALNT3Q6L9W6 998 aa3.09□□□□□ -1.91
SNORA48.1-201ENST00000390879 USP17L2Q6R6M4 530 aa3.09□□□□□ -1.91
SNORA48.1-201ENST00000390879 USP17L1Q7RTZ2 530 aa3.09□□□□□ -1.91
SNORA48.1-201ENST00000390879 RETREG3Q86VR2 466 aa3.09□□□□□ -1.91
SNORA48.1-201ENST00000390879 UNCXA6NJT0 531 aa3.08□□□□□ -1.92
SNORA48.1-201ENST00000390879 ZBBXA8MT70 800 aa3.08□□□□□ -1.92
SNORA48.1-201ENST00000390879 HOXB1P14653 301 aaPredicted RBP3.08□□□□□ -1.92
SNORA48.1-201ENST00000390879 FAM98CQ17RN3 349 aaKnown RBP3.08□□□□□ -1.92
SNORA48.1-201ENST00000390879 KMT5BQ4FZB7 885 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms