RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 NRXN1Q9ULB1 1477 aa4.47□□□□□ -1.69
TRAV39-201ENST00000390466 ABCC1P33527 1531 aa4.46□□□□□ -1.69
TRAV39-201ENST00000390466 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.46□□□□□ -1.69
TRAV39-201ENST00000390466 KNDC1Q76NI1 1749 aa4.46□□□□□ -1.69
TRAV39-201ENST00000390466 ARHGEF28Q8N1W1 1705 aaKnown RBP4.46□□□□□ -1.69
TRAV39-201ENST00000390466 DLG5Q8TDM6 1919 aa4.46□□□□□ -1.69
TRAV39-201ENST00000390466 REREQ9P2R6 1566 aa4.46□□□□□ -1.7
TRAV39-201ENST00000390466 SETBP1Q9Y6X0 1596 aa4.46□□□□□ -1.7
TRAV39-201ENST00000390466 MYOM2P54296 1465 aa4.46□□□□□ -1.7
TRAV39-201ENST00000390466 SCAF11Q99590 1463 aaKnown RBP4.46□□□□□ -1.7
TRAV39-201ENST00000390466 RRP9O43818 475 aaKnown RBP4.46□□□□□ -1.7
TRAV39-201ENST00000390466 ABCB7O75027 752 aa4.46□□□□□ -1.7
TRAV39-201ENST00000390466 ZNF326Q5BKZ1 582 aaKnown RBP4.46□□□□□ -1.7
TRAV39-201ENST00000390466 L1TD1Q5T7N2 865 aaKnown RBP4.46□□□□□ -1.7
TRAV39-201ENST00000390466 POLR3GLQ9BT43 218 aa4.46□□□□□ -1.7
TRAV39-201ENST00000390466 ZMYND15Q9H091 742 aa4.46□□□□□ -1.7
TRAV39-201ENST00000390466 PANK3Q9H999 370 aa4.46□□□□□ -1.7
TRAV39-201ENST00000390466 PTPRTO14522 1441 aa4.46□□□□□ -1.7
TRAV39-201ENST00000390466 MAPK8IP3Q9UPT6 1336 aa4.46□□□□□ -1.7
TRAV39-201ENST00000390466 ADGRB1O14514 1584 aa4.45□□□□□ -1.7
TRAV39-201ENST00000390466 ADGRL1O94910 1474 aa4.45□□□□□ -1.7
TRAV39-201ENST00000390466 COL3A1P02461 1466 aaPredicted RBP4.45□□□□□ -1.7
TRAV39-201ENST00000390466 EIF5BO60841 1220 aaKnown RBP4.45□□□□□ -1.7
TRAV39-201ENST00000390466 MCM4P33991 863 aa4.45□□□□□ -1.7
TRAV39-201ENST00000390466 GOLGA2Q08379 1002 aa4.45□□□□□ -1.7
TRAV39-201ENST00000390466 CNGB1Q14028 1251 aaPredicted RBP4.45□□□□□ -1.7
TRAV39-201ENST00000390466 PDE3AQ14432 1141 aa4.45□□□□□ -1.7
TRAV39-201ENST00000390466 CFDP1Q9UEE9 299 aaPredicted RBP4.45□□□□□ -1.7
TRAV39-201ENST00000390466 ZFYVE16Q7Z3T8 1539 aa4.45□□□□□ -1.7
TRAV39-201ENST00000390466 CGNL1Q0VF96 1302 aa4.45□□□□□ -1.7
TRAV39-201ENST00000390466 CDC42BPGQ6DT37 1551 aa4.44□□□□□ -1.7
TRAV39-201ENST00000390466 POLR3AO14802 1390 aaPredicted RBP4.44□□□□□ -1.7
TRAV39-201ENST00000390466 RGS3P49796 1198 aa4.44□□□□□ -1.7
TRAV39-201ENST00000390466 CC2D1BQ5T0F9 858 aaKnown RBP4.44□□□□□ -1.7
TRAV39-201ENST00000390466 PRDM4Q9UKN5 801 aa4.44□□□□□ -1.7
TRAV39-201ENST00000390466 PCDHB15Q9Y5E8 787 aa4.44□□□□□ -1.7
TRAV39-201ENST00000390466 N4BP2Q86UW6 1770 aaPredicted RBP4.44□□□□□ -1.7
TRAV39-201ENST00000390466 YEATS2Q9ULM3 1422 aa4.44□□□□□ -1.7
TRAV39-201ENST00000390466 CLTCQ00610 1675 aaKnown RBP4.44□□□□□ -1.7
TRAV39-201ENST00000390466 KIF20BQ96Q89 1820 aa4.44□□□□□ -1.7
TRAV39-201ENST00000390466 ERCC6L2Q5T890 1561 aa4.44□□□□□ -1.7
TRAV39-201ENST00000390466 MED14O60244 1454 aa4.43□□□□□ -1.7
TRAV39-201ENST00000390466 SBNO2Q9Y2G9 1366 aa4.43□□□□□ -1.7
TRAV39-201ENST00000390466 ADGRB3O60242 1522 aa4.43□□□□□ -1.7
TRAV39-201ENST00000390466 POTEMA6NI47 508 aa4.43□□□□□ -1.7
TRAV39-201ENST00000390466 ARID3CA6NKF2 412 aa4.43□□□□□ -1.7
TRAV39-201ENST00000390466 BCAR3O75815 825 aa4.43□□□□□ -1.7
TRAV39-201ENST00000390466 RLBP1P12271 317 aa4.43□□□□□ -1.7
TRAV39-201ENST00000390466 RIPK4P57078 832 aa4.43□□□□□ -1.7
TRAV39-201ENST00000390466 GAS2L3Q86XJ1 694 aa4.43□□□□□ -1.7
TRAV39-201ENST00000390466 CHMP7Q8WUX9 453 aaPredicted RBP4.43□□□□□ -1.7
TRAV39-201ENST00000390466 CLUAP1Q96AJ1 413 aa4.43□□□□□ -1.7
TRAV39-201ENST00000390466 ISY1Q9ULR0 285 aaKnown RBP4.43□□□□□ -1.7
TRAV39-201ENST00000390466 TNNQ9UQP3 1299 aa4.43□□□□□ -1.7
TRAV39-201ENST00000390466 NOS1P29475 1434 aa4.43□□□□□ -1.7
TRAV39-201ENST00000390466 ZNF518AQ6AHZ1 1483 aa4.43□□□□□ -1.7
TRAV39-201ENST00000390466 IBTKQ9P2D0 1353 aaPredicted RBP4.42□□□□□ -1.7
TRAV39-201ENST00000390466 ARAP3Q8WWN8 1544 aa4.42□□□□□ -1.7
TRAV39-201ENST00000390466 ESPNB1AK53 854 aa4.42□□□□□ -1.7
TRAV39-201ENST00000390466 MRE11P49959 708 aa4.42□□□□□ -1.7
TRAV39-201ENST00000390466 NGEFQ8N5V2 710 aa4.42□□□□□ -1.7
TRAV39-201ENST00000390466 PPP1R9BQ96SB3 815 aa4.42□□□□□ -1.7
TRAV39-201ENST00000390466 SLKQ9H2G2 1235 aaPredicted RBP4.42□□□□□ -1.7
TRAV39-201ENST00000390466 PNNQ9H307 717 aaKnown RBP4.42□□□□□ -1.7
TRAV39-201ENST00000390466 PDZRN3Q9UPQ7 1066 aa4.42□□□□□ -1.7
TRAV39-201ENST00000390466 PIK3C2BO00750 1634 aa4.42□□□□□ -1.7
TRAV39-201ENST00000390466 ABCA9Q8IUA7 1624 aa4.42□□□□□ -1.7
TRAV39-201ENST00000390466 MYO5BQ9ULV0 1848 aa4.42□□□□□ -1.7
TRAV39-201ENST00000390466 EFCAB6Q5THR3 1501 aa4.41□□□□□ -1.7
TRAV39-201ENST00000390466 GOLGA6L3A6NEY3 463 aa4.41□□□□□ -1.7
TRAV39-201ENST00000390466 E9PSI1 815 aa4.41□□□□□ -1.7
TRAV39-201ENST00000390466 TPM2P07951 284 aa4.41□□□□□ -1.7
TRAV39-201ENST00000390466 CALD1Q05682 793 aaKnown RBP4.41□□□□□ -1.7
TRAV39-201ENST00000390466 AAMPQ13685 434 aa4.41□□□□□ -1.7
TRAV39-201ENST00000390466 BECN1Q14457 450 aa4.41□□□□□ -1.7
TRAV39-201ENST00000390466 CLEC17AQ6ZS10 378 aa4.41□□□□□ -1.7
TRAV39-201ENST00000390466 SMC5Q8IY18 1101 aa4.41□□□□□ -1.7
TRAV39-201ENST00000390466 VSIG10Q8N0Z9 540 aa4.41□□□□□ -1.7
TRAV39-201ENST00000390466 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.41□□□□□ -1.7
TRAV39-201ENST00000390466 PANK1Q8TE04 598 aa4.41□□□□□ -1.7
TRAV39-201ENST00000390466 KIF2CQ99661 725 aa4.41□□□□□ -1.7
TRAV39-201ENST00000390466 GRPEL1Q9HAV7 217 aa4.41□□□□□ -1.7
TRAV39-201ENST00000390466 CHMP5Q9NZZ3 219 aa4.41□□□□□ -1.7
TRAV39-201ENST00000390466 KDM2AQ9Y2K7 1162 aa4.41□□□□□ -1.7
TRAV39-201ENST00000390466 ZCCHC11Q5TAX3 1644 aaKnown RBP4.41□□□□□ -1.7
TRAV39-201ENST00000390466 TULP4Q9NRJ4 1543 aa4.41□□□□□ -1.7
TRAV39-201ENST00000390466 SIGLEC1Q9BZZ2 1709 aa4.41□□□□□ -1.7
TRAV39-201ENST00000390466 UGGT1Q9NYU2 1555 aa4.4□□□□□ -1.7
TRAV39-201ENST00000390466 CD109Q6YHK3 1445 aa4.4□□□□□ -1.7
TRAV39-201ENST00000390466 CAMSAP1Q5T5Y3 1602 aa4.4□□□□□ -1.7
TRAV39-201ENST00000390466 APAF1O14727 1248 aa4.4□□□□□ -1.71
TRAV39-201ENST00000390466 TRAK2O60296 914 aa4.4□□□□□ -1.71
TRAV39-201ENST00000390466 RARSP54136 660 aaKnown RBP4.4□□□□□ -1.71
TRAV39-201ENST00000390466 TERF1P54274 439 aa4.4□□□□□ -1.71
TRAV39-201ENST00000390466 TMF1P82094 1093 aa4.4□□□□□ -1.71
TRAV39-201ENST00000390466 HSP90AA2PQ14568 343 aaPredicted RBP4.4□□□□□ -1.71
TRAV39-201ENST00000390466 CHRDL2Q6WN34 429 aa4.4□□□□□ -1.71
TRAV39-201ENST00000390466 WWC1Q8IX03 1113 aa4.4□□□□□ -1.71
TRAV39-201ENST00000390466 SNX21Q969T3 373 aa4.4□□□□□ -1.71
TRAV39-201ENST00000390466 NAP1L5Q96NT1 182 aaPredicted RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms