RNA–Protein interactions for RNA: ENST00000390454.2

TRAV25-201, Transcript of T cell receptor alpha variable 25, humanhuman

APPRIS P1 BASIC

Gene TRAV25, Length 403 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25-201ENST00000390454 TTC13Q8NBP0 860 aa8.94□□□□□ -0.98
TRAV25-201ENST00000390454 PCDHB15Q9Y5E8 787 aa8.94□□□□□ -0.98
TRAV25-201ENST00000390454 SEMA3FQ13275 785 aa8.93□□□□□ -0.98
TRAV25-201ENST00000390454 C6orf132Q5T0Z8 1188 aa8.93□□□□□ -0.98
TRAV25-201ENST00000390454 GOLGA3Q08378 1498 aa8.92□□□□□ -0.98
TRAV25-201ENST00000390454 RCCD1A6NED2 376 aa8.92□□□□□ -0.98
TRAV25-201ENST00000390454 DDX11L8A8MPP1 907 aa8.92□□□□□ -0.98
TRAV25-201ENST00000390454 CABLES1Q8TDN4 633 aa8.92□□□□□ -0.98
TRAV25-201ENST00000390454 MRRFQ96E11 262 aaKnown RBP8.92□□□□□ -0.98
TRAV25-201ENST00000390454 MAFBQ9Y5Q3 323 aaPredicted RBP8.92□□□□□ -0.98
TRAV25-201ENST00000390454 PNMA1Q8ND90 353 aa8.91□□□□□ -0.98
TRAV25-201ENST00000390454 HELBQ8NG08 1087 aaPredicted RBP8.91□□□□□ -0.98
TRAV25-201ENST00000390454 SLC39A7Q92504 469 aa8.91□□□□□ -0.98
TRAV25-201ENST00000390454 IGSF5Q9NSI5 407 aa8.91□□□□□ -0.98
TRAV25-201ENST00000390454 PRSS12P56730 875 aa8.9□□□□□ -0.98
TRAV25-201ENST00000390454 UCN2Q96RP3 112 aa8.9□□□□□ -0.98
TRAV25-201ENST00000390454 C7P10643 843 aa8.89□□□□□ -0.99
TRAV25-201ENST00000390454 CCDC88BA6NC98 1476 aa8.89□□□□□ -0.99
TRAV25-201ENST00000390454 POTEFA5A3E0 1075 aa8.88□□□□□ -0.99
TRAV25-201ENST00000390454 ELOAQ14241 798 aaKnown RBP8.88□□□□□ -0.99
TRAV25-201ENST00000390454 PRR7Q8TB68 274 aa8.88□□□□□ -0.99
TRAV25-201ENST00000390454 SIRT1Q96EB6 747 aa8.88□□□□□ -0.99
TRAV25-201ENST00000390454 CDCA7LQ96GN5 454 aa8.88□□□□□ -0.99
TRAV25-201ENST00000390454 TRIM34Q9BYJ4 488 aa8.88□□□□□ -0.99
TRAV25-201ENST00000390454 HMX1Q9NP08 348 aaPredicted RBP8.88□□□□□ -0.99
TRAV25-201ENST00000390454 SMARCA2P51531 1590 aa8.87□□□□□ -0.99
TRAV25-201ENST00000390454 ATP9BO43861 1147 aa8.87□□□□□ -0.99
TRAV25-201ENST00000390454 ARID4AP29374 1257 aaPredicted RBP8.87□□□□□ -0.99
TRAV25-201ENST00000390454 USP46P62068 366 aa8.87□□□□□ -0.99
TRAV25-201ENST00000390454 CTDSPL2Q05D32 466 aa8.87□□□□□ -0.99
TRAV25-201ENST00000390454 TXNDC2Q86VQ3 553 aa8.87□□□□□ -0.99
TRAV25-201ENST00000390454 FAM177A1Q8N128 213 aaPredicted RBP8.87□□□□□ -0.99
TRAV25-201ENST00000390454 TSC1Q92574 1164 aa8.87□□□□□ -0.99
TRAV25-201ENST00000390454 ZDHHC16Q969W1 377 aa8.87□□□□□ -0.99
TRAV25-201ENST00000390454 METRNQ9UJH8 293 aa8.87□□□□□ -0.99
TRAV25-201ENST00000390454 CEP164Q9UPV0 1460 aa8.86□□□□□ -0.99
TRAV25-201ENST00000390454 POTEB2H3BUK9 544 aa8.86□□□□□ -0.99
TRAV25-201ENST00000390454 KDM4AO75164 1064 aa8.86□□□□□ -0.99
TRAV25-201ENST00000390454 DNAJB2P25686 324 aa8.86□□□□□ -0.99
TRAV25-201ENST00000390454 EIF4G2P78344 907 aaKnown RBP eCLIP8.86□□□□□ -0.99
TRAV25-201ENST00000390454 RDH13Q8NBN7 331 aa8.86□□□□□ -0.99
TRAV25-201ENST00000390454 BCL2L13Q9BXK5 485 aa8.86□□□□□ -0.99
TRAV25-201ENST00000390454 SMARCA4P51532 1647 aa8.86□□□□□ -0.99
TRAV25-201ENST00000390454 FDX1P10109 184 aa8.85□□□□□ -0.99
TRAV25-201ENST00000390454 FOSBP53539 338 aa8.85□□□□□ -0.99
TRAV25-201ENST00000390454 TBC1D9Q6ZT07 1266 aa8.85□□□□□ -0.99
TRAV25-201ENST00000390454 KIAA1522Q9P206 1035 aaPredicted RBP8.85□□□□□ -0.99
TRAV25-201ENST00000390454 GPR37L1O60883 481 aa8.84□□□□□ -0.99
TRAV25-201ENST00000390454 EYA1Q99502 592 aa8.84□□□□□ -0.99
TRAV25-201ENST00000390454 PCDHGA4Q9Y5G9 962 aa8.84□□□□□ -0.99
TRAV25-201ENST00000390454 KIF21BO75037 1637 aa8.83□□□□□ -1
TRAV25-201ENST00000390454 BAZ1BQ9UIG0 1483 aaKnown RBP8.83□□□□□ -1
TRAV25-201ENST00000390454 ABCC8Q09428 1581 aa8.83□□□□□ -1
TRAV25-201ENST00000390454 SOGA1O94964 1423 aa8.83□□□□□ -1
TRAV25-201ENST00000390454 TCF3P15923 654 aa8.83□□□□□ -1
TRAV25-201ENST00000390454 CANXP27824 592 aaKnown RBP8.83□□□□□ -1
TRAV25-201ENST00000390454 ZNF454Q8N9F8 522 aa8.83□□□□□ -1
TRAV25-201ENST00000390454 ZNF16P17020 682 aaPredicted RBP8.82□□□□□ -1
TRAV25-201ENST00000390454 MTMR2Q13614 643 aa8.82□□□□□ -1
TRAV25-201ENST00000390454 TMEM164Q5U3C3 297 aa8.82□□□□□ -1
TRAV25-201ENST00000390454 DNAJC14Q6Y2X3 702 aaPredicted RBP8.82□□□□□ -1
TRAV25-201ENST00000390454 C3orf67Q6ZVT6 689 aa8.82□□□□□ -1
TRAV25-201ENST00000390454 NOVA2Q9UNW9 492 aaKnown RBP8.82□□□□□ -1
TRAV25-201ENST00000390454 COLQQ9Y215 455 aaPredicted RBP8.82□□□□□ -1
TRAV25-201ENST00000390454 HOXA2O43364 376 aa8.81□□□□□ -1
TRAV25-201ENST00000390454 SEC24BO95487 1268 aa8.81□□□□□ -1
TRAV25-201ENST00000390454 ZNF326Q5BKZ1 582 aaKnown RBP8.81□□□□□ -1
TRAV25-201ENST00000390454 CCDC125Q86Z20 511 aa8.81□□□□□ -1
TRAV25-201ENST00000390454 LRRN4Q8WUT4 740 aa8.81□□□□□ -1
TRAV25-201ENST00000390454 DRC1Q96MC2 740 aa8.81□□□□□ -1
TRAV25-201ENST00000390454 VPS8Q8N3P4 1428 aa8.8□□□□□ -1
TRAV25-201ENST00000390454 NBPF26B4DH59 902 aa8.8□□□□□ -1
TRAV25-201ENST00000390454 POTEJP0CG39 1038 aa8.8□□□□□ -1
TRAV25-201ENST00000390454 MARSP56192 900 aaKnown RBP8.8□□□□□ -1
TRAV25-201ENST00000390454 GIPC2Q8TF65 315 aa8.8□□□□□ -1
TRAV25-201ENST00000390454 BCL11AQ9H165 835 aa8.8□□□□□ -1
TRAV25-201ENST00000390454 KANK4Q5T7N3 995 aaPredicted RBP8.79□□□□□ -1
TRAV25-201ENST00000390454 SLF2Q8IX21 1173 aa8.79□□□□□ -1
TRAV25-201ENST00000390454 STK32AQ8WU08 396 aa8.79□□□□□ -1
TRAV25-201ENST00000390454 TMEM134Q9H6X4 195 aa8.79□□□□□ -1
TRAV25-201ENST00000390454 ZMIZ1Q9ULJ6 1067 aa8.79□□□□□ -1
TRAV25-201ENST00000390454 CLIP1P30622 1438 aa8.79□□□□□ -1
TRAV25-201ENST00000390454 TTBK1Q5TCY1 1321 aaPredicted RBP8.79□□□□□ -1
TRAV25-201ENST00000390454 SOWAHDA6NJG2 315 aa8.78□□□□□ -1
TRAV25-201ENST00000390454 NUDT18Q6ZVK8 323 aa8.78□□□□□ -1
TRAV25-201ENST00000390454 C8orf37Q96NL8 207 aa8.78□□□□□ -1
TRAV25-201ENST00000390454 BIN2Q9UBW5 565 aaPredicted RBP8.78□□□□□ -1
TRAV25-201ENST00000390454 SSFA2P28290 1259 aa8.77□□□□□ -1.01
TRAV25-201ENST00000390454 SREK1Q8WXA9 508 aaKnown RBP8.77□□□□□ -1.01
TRAV25-201ENST00000390454 YTHDC1Q96MU7 727 aaKnown RBP8.77□□□□□ -1.01
TRAV25-201ENST00000390454 ADAM33Q9BZ11 813 aa8.77□□□□□ -1.01
TRAV25-201ENST00000390454 GCGRP47871 477 aa8.76□□□□□ -1.01
TRAV25-201ENST00000390454 PHLDB3Q6NSJ2 640 aa8.76□□□□□ -1.01
TRAV25-201ENST00000390454 NFATC2IPQ8NCF5 419 aa8.76□□□□□ -1.01
TRAV25-201ENST00000390454 PNMA3Q9UL41 463 aa8.76□□□□□ -1.01
TRAV25-201ENST00000390454 FAM196BA6NMK8 535 aa8.75□□□□□ -1.01
TRAV25-201ENST00000390454 C6orf229H3BNL8 230 aa8.75□□□□□ -1.01
TRAV25-201ENST00000390454 LARP1Q6PKG0 1096 aaKnown RBP8.75□□□□□ -1.01
TRAV25-201ENST00000390454 EPS8L1Q8TE68 723 aa8.75□□□□□ -1.01
TRAV25-201ENST00000390454 OTUD5Q96G74 571 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms