RNA–Protein interactions for RNA: ENST00000389425.7

SEMA6D-205, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 2,318 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-205ENST00000389425 UPF2Q9HAU5 1272 aaKnown RBP23.51■■□□□ 1.35
SEMA6D-205ENST00000389425 PANK1Q8TE04 598 aa23.51■■□□□ 1.35
SEMA6D-205ENST00000389425 HECW2Q9P2P5 1572 aa23.51■■□□□ 1.35
SEMA6D-205ENST00000389425 EIF5BO60841 1220 aaKnown RBP23.5■■□□□ 1.35
SEMA6D-205ENST00000389425 CANXP27824 592 aaKnown RBP23.5■■□□□ 1.35
SEMA6D-205ENST00000389425 TBC1D32Q96NH3 1257 aa23.5■■□□□ 1.35
SEMA6D-205ENST00000389425 MAP3K4Q9Y6R4 1608 aa23.5■■□□□ 1.35
SEMA6D-205ENST00000389425 KANK1Q14678 1352 aa23.48■■□□□ 1.35
SEMA6D-205ENST00000389425 SLKQ9H2G2 1235 aaPredicted RBP23.48■■□□□ 1.35
SEMA6D-205ENST00000389425 NEURL4Q96JN8 1562 aa23.48■■□□□ 1.35
SEMA6D-205ENST00000389425 NEO1Q92859 1461 aa23.47■■□□□ 1.35
SEMA6D-205ENST00000389425 KIF3BO15066 747 aa23.47■■□□□ 1.35
SEMA6D-205ENST00000389425 ERVK-7P63135 1459 aa23.46■■□□□ 1.35
SEMA6D-205ENST00000389425 CLTCL1P53675 1640 aa23.46■■□□□ 1.35
SEMA6D-205ENST00000389425 RARSP54136 660 aaKnown RBP23.45■■□□□ 1.35
SEMA6D-205ENST00000389425 CYB5RLQ6IPT4 315 aa23.45■■□□□ 1.35
SEMA6D-205ENST00000389425 CARD14Q9BXL6 1004 aa23.45■■□□□ 1.35
SEMA6D-205ENST00000389425 MLH3Q9UHC1 1453 aa23.45■■□□□ 1.34
SEMA6D-205ENST00000389425 ABCA6Q8N139 1617 aa23.45■■□□□ 1.34
SEMA6D-205ENST00000389425 TBC1D2Q9BYX2 928 aa23.44■■□□□ 1.34
SEMA6D-205ENST00000389425 PHF23Q9BUL5 403 aaPredicted RBP23.43■■□□□ 1.34
SEMA6D-205ENST00000389425 GLI2P10070 1586 aa23.43■■□□□ 1.34
SEMA6D-205ENST00000389425 FRMPD1Q5SYB0 1578 aa23.43■■□□□ 1.34
SEMA6D-205ENST00000389425 PCDHB15Q9Y5E8 787 aa23.42■■□□□ 1.34
SEMA6D-205ENST00000389425 WDR63Q8IWG1 891 aa23.42■■□□□ 1.34
SEMA6D-205ENST00000389425 RICTORQ6R327 1708 aa23.42■■□□□ 1.34
SEMA6D-205ENST00000389425 PDZRN3Q9UPQ7 1066 aa23.41■■□□□ 1.34
SEMA6D-205ENST00000389425 RWDD1Q9H446 243 aaPredicted RBP23.41■■□□□ 1.34
SEMA6D-205ENST00000389425 RRAGDQ9NQL2 400 aaPredicted RBP23.41■■□□□ 1.34
SEMA6D-205ENST00000389425 EFCAB6Q5THR3 1501 aa23.4■■□□□ 1.34
SEMA6D-205ENST00000389425 PPRC1Q5VV67 1664 aaKnown RBP23.4■■□□□ 1.34
SEMA6D-205ENST00000389425 FSD2A1L4K1 749 aa23.4■■□□□ 1.34
SEMA6D-205ENST00000389425 RUNDC1Q96C34 613 aa23.4■■□□□ 1.34
SEMA6D-205ENST00000389425 NCBP3Q53F19 620 aaKnown RBP23.39■■□□□ 1.34
SEMA6D-205ENST00000389425 SBNO2Q9Y2G9 1366 aa23.39■■□□□ 1.34
SEMA6D-205ENST00000389425 MYOM2P54296 1465 aa23.38■■□□□ 1.33
SEMA6D-205ENST00000389425 IQSEC2Q5JU85 1478 aa23.38■■□□□ 1.33
SEMA6D-205ENST00000389425 CCDC27Q2M243 656 aa23.37■■□□□ 1.33
SEMA6D-205ENST00000389425 SHPRHQ149N8 1683 aa23.37■■□□□ 1.33
SEMA6D-205ENST00000389425 LMTK2Q8IWU2 1503 aa23.36■■□□□ 1.33
SEMA6D-205ENST00000389425 RLBP1P12271 317 aa23.36■■□□□ 1.33
SEMA6D-205ENST00000389425 MCM4P33991 863 aa23.36■■□□□ 1.33
SEMA6D-205ENST00000389425 GOLGA6L3A6NEY3 463 aa23.36■■□□□ 1.33
SEMA6D-205ENST00000389425 KIF1BO60333 1816 aa23.35■■□□□ 1.33
SEMA6D-205ENST00000389425 DIP2BQ9P265 1576 aa23.35■■□□□ 1.33
SEMA6D-205ENST00000389425 XRCC6P12956 609 aaKnown RBP eCLIP23.34■■□□□ 1.33
SEMA6D-205ENST00000389425 MYO3AQ8NEV4 1616 aa23.34■■□□□ 1.33
SEMA6D-205ENST00000389425 DIP2CQ9Y2E4 1556 aa23.34■■□□□ 1.33
SEMA6D-205ENST00000389425 TCP11L2Q8N4U5 519 aa23.33■■□□□ 1.33
SEMA6D-205ENST00000389425 CHMP5Q9NZZ3 219 aa23.32■■□□□ 1.32
SEMA6D-205ENST00000389425 CFAP70Q5T0N1 1121 aa23.32■■□□□ 1.32
SEMA6D-205ENST00000389425 RAPGEF3O95398 923 aa23.31■■□□□ 1.32
SEMA6D-205ENST00000389425 TSPOAP1O95153 1857 aa23.3■■□□□ 1.32
SEMA6D-205ENST00000389425 UGGT1Q9NYU2 1555 aa23.3■■□□□ 1.32
SEMA6D-205ENST00000389425 MVPQ14764 893 aaKnown RBP23.3■■□□□ 1.32
SEMA6D-205ENST00000389425 MORC1Q86VD1 984 aa23.3■■□□□ 1.32
SEMA6D-205ENST00000389425 CFAP65Q6ZU64 1925 aaKnown RBP23.29■■□□□ 1.32
SEMA6D-205ENST00000389425 MYH16Q9H6N6 1097 aa23.28■■□□□ 1.32
SEMA6D-205ENST00000389425 TNNQ9UQP3 1299 aa23.28■■□□□ 1.32
SEMA6D-205ENST00000389425 MROH2AA6NES4 1674 aa23.28■■□□□ 1.32
SEMA6D-205ENST00000389425 CLCN1P35523 988 aa23.28■■□□□ 1.32
SEMA6D-205ENST00000389425 C22orf23Q9BZE7 217 aa23.28■■□□□ 1.32
SEMA6D-205ENST00000389425 CT47B1P0C2W7 299 aaPredicted RBP23.27■■□□□ 1.32
SEMA6D-205ENST00000389425 NEUROD2Q15784 382 aa23.27■■□□□ 1.32
SEMA6D-205ENST00000389425 RRP7AQ9Y3A4 280 aaKnown RBP23.27■■□□□ 1.32
SEMA6D-205ENST00000389425 NSD3Q9BZ95 1437 aa23.27■■□□□ 1.32
SEMA6D-205ENST00000389425 IFT172Q9UG01 1749 aa23.27■■□□□ 1.32
SEMA6D-205ENST00000389425 NRXN1Q9ULB1 1477 aa23.27■■□□□ 1.31
SEMA6D-205ENST00000389425 ISY1Q9ULR0 285 aaKnown RBP23.26■■□□□ 1.31
SEMA6D-205ENST00000389425 ADGRF5Q8IZF2 1346 aa23.26■■□□□ 1.31
SEMA6D-205ENST00000389425 CAMSAP1Q5T5Y3 1602 aa23.25■■□□□ 1.31
SEMA6D-205ENST00000389425 TRAK2O60296 914 aa23.25■■□□□ 1.31
SEMA6D-205ENST00000389425 MRE11P49959 708 aa23.25■■□□□ 1.31
SEMA6D-205ENST00000389425 ZKSCAN2Q63HK3 967 aa23.25■■□□□ 1.31
SEMA6D-205ENST00000389425 ABCC3O15438 1527 aa23.24■■□□□ 1.31
SEMA6D-205ENST00000389425 USP32Q8NFA0 1604 aa23.24■■□□□ 1.31
SEMA6D-205ENST00000389425 HDAC1Q13547 482 aaPredicted RBP23.24■■□□□ 1.31
SEMA6D-205ENST00000389425 BCL2L13Q9BXK5 485 aa23.22■■□□□ 1.31
SEMA6D-205ENST00000389425 SETBP1Q9Y6X0 1596 aa23.22■■□□□ 1.31
SEMA6D-205ENST00000389425 FAM69CQ0P6D2 419 aa23.22■■□□□ 1.31
SEMA6D-205ENST00000389425 GGT6Q6P531 493 aa23.22■■□□□ 1.31
SEMA6D-205ENST00000389425 DZIP1LQ8IYY4 767 aaKnown RBP23.22■■□□□ 1.31
SEMA6D-205ENST00000389425 CFAP53Q96M91 514 aa23.22■■□□□ 1.31
SEMA6D-205ENST00000389425 DDX11L8A8MPP1 907 aa23.21■■□□□ 1.31
SEMA6D-205ENST00000389425 PNNQ9H307 717 aaKnown RBP23.21■■□□□ 1.31
SEMA6D-205ENST00000389425 YEATS2Q9ULM3 1422 aa23.2■■□□□ 1.3
SEMA6D-205ENST00000389425 NPATQ14207 1427 aa23.19■■□□□ 1.3
SEMA6D-205ENST00000389425 NCOA3Q9Y6Q9 1424 aa23.19■■□□□ 1.3
SEMA6D-205ENST00000389425 ZC3H13Q5T200 1668 aaKnown RBP23.19■■□□□ 1.3
SEMA6D-205ENST00000389425 ZNF692Q9BU19 519 aaPredicted RBP23.19■■□□□ 1.3
SEMA6D-205ENST00000389425 PANK2Q9BZ23 570 aa23.19■■□□□ 1.3
SEMA6D-205ENST00000389425 FTSJ3Q8IY81 847 aaKnown RBP23.19■■□□□ 1.3
SEMA6D-205ENST00000389425 SIGLEC1Q9BZZ2 1709 aa23.18■■□□□ 1.3
SEMA6D-205ENST00000389425 MTHFSP49914 203 aa23.18■■□□□ 1.3
SEMA6D-205ENST00000389425 SPRYD3Q8NCJ5 442 aa23.18■■□□□ 1.3
SEMA6D-205ENST00000389425 MFAP1P55081 439 aaKnown RBP23.17■■□□□ 1.3
SEMA6D-205ENST00000389425 HSCBQ8IWL3 235 aa23.17■■□□□ 1.3
SEMA6D-205ENST00000389425 GZF1Q9H116 711 aaPredicted RBP23.17■■□□□ 1.3
SEMA6D-205ENST00000389425 DDIT3P35638 169 aa23.17■■□□□ 1.3
SEMA6D-205ENST00000389425 ADGRB2O60241 1585 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms