RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 HSP90AB4PQ58FF6 505 aa14.93□□□□□ -0.02
KCNQ3-201ENST00000388996 ANO8Q9HCE9 1232 aaPredicted RBP14.93□□□□□ -0.02
KCNQ3-201ENST00000388996 PLEKHH2Q8IVE3 1493 aa14.93□□□□□ -0.02
KCNQ3-201ENST00000388996 WASHC2AQ641Q2 1341 aa14.93□□□□□ -0.02
KCNQ3-201ENST00000388996 NLRP2Q9NX02 1062 aa14.93□□□□□ -0.02
KCNQ3-201ENST00000388996 KIF7Q2M1P5 1343 aa14.93□□□□□ -0.02
KCNQ3-201ENST00000388996 CUL7Q14999 1698 aa14.92□□□□□ -0.02
KCNQ3-201ENST00000388996 SAFBQ15424 915 aaKnown RBP eCLIP14.92□□□□□ -0.02
KCNQ3-201ENST00000388996 AAMPQ13685 434 aa14.92□□□□□ -0.02
KCNQ3-201ENST00000388996 CC2D2AQ9P2K1 1620 aa14.92□□□□□ -0.02
KCNQ3-201ENST00000388996 ERICH2A1L162 156 aa14.92□□□□□ -0.02
KCNQ3-201ENST00000388996 BICD2Q8TD16 824 aa14.92□□□□□ -0.02
KCNQ3-201ENST00000388996 RAPGEF4Q8WZA2 1011 aa14.92□□□□□ -0.02
KCNQ3-201ENST00000388996 INTS3Q68E01 1043 aaKnown RBP14.92□□□□□ -0.02
KCNQ3-201ENST00000388996 GPRASP1Q5JY77 1395 aa14.92□□□□□ -0.02
KCNQ3-201ENST00000388996 MYO10Q9HD67 2058 aa14.91□□□□□ -0.02
KCNQ3-201ENST00000388996 VPS37CA5D8V6 355 aaPredicted RBP14.91□□□□□ -0.02
KCNQ3-201ENST00000388996 STAC3Q96MF2 364 aa14.91□□□□□ -0.02
KCNQ3-201ENST00000388996 HMOX1P09601 288 aa14.91□□□□□ -0.02
KCNQ3-201ENST00000388996 BRD4O60885 1362 aaPredicted RBP14.9□□□□□ -0.02
KCNQ3-201ENST00000388996 RALYLQ86SE5 291 aaKnown RBP14.9□□□□□ -0.02
KCNQ3-201ENST00000388996 MRC2Q9UBG0 1479 aa14.9□□□□□ -0.02
KCNQ3-201ENST00000388996 TIAM1Q13009 1591 aa14.9□□□□□ -0.02
KCNQ3-201ENST00000388996 CFTRP13569 1480 aa14.9□□□□□ -0.02
KCNQ3-201ENST00000388996 GPS2Q13227 327 aa14.89□□□□□ -0.03
KCNQ3-201ENST00000388996 CCDC73Q6ZRK6 1079 aa14.89□□□□□ -0.03
KCNQ3-201ENST00000388996 CWC22Q9HCG8 908 aaKnown RBP14.89□□□□□ -0.03
KCNQ3-201ENST00000388996 SETQ01105 290 aaPredicted RBP14.89□□□□□ -0.03
KCNQ3-201ENST00000388996 SETD1BQ9UPS6 1966 aaKnown RBP14.89□□□□□ -0.03
KCNQ3-201ENST00000388996 FOSBP53539 338 aa14.89□□□□□ -0.03
KCNQ3-201ENST00000388996 UBTFL1P0CB47 393 aaPredicted RBP14.89□□□□□ -0.03
KCNQ3-201ENST00000388996 UNC13AQ9UPW8 1703 aa14.89□□□□□ -0.03
KCNQ3-201ENST00000388996 CABP2Q9NPB3 220 aa14.88□□□□□ -0.03
KCNQ3-201ENST00000388996 IGF1RP08069 1367 aa14.88□□□□□ -0.03
KCNQ3-201ENST00000388996 CNKSR2Q8WXI2 1034 aa14.88□□□□□ -0.03
KCNQ3-201ENST00000388996 SMC3Q9UQE7 1217 aa14.88□□□□□ -0.03
KCNQ3-201ENST00000388996 RIC3Q7Z5B4 369 aa14.88□□□□□ -0.03
KCNQ3-201ENST00000388996 ZNF592Q92610 1267 aa14.87□□□□□ -0.03
KCNQ3-201ENST00000388996 NUTM2GQ5VZR2 741 aa14.87□□□□□ -0.03
KCNQ3-201ENST00000388996 RSPH6AQ9H0K4 717 aa14.87□□□□□ -0.03
KCNQ3-201ENST00000388996 BRMS1Q9HCU9 246 aa14.87□□□□□ -0.03
KCNQ3-201ENST00000388996 KIF14Q15058 1648 aa14.87□□□□□ -0.03
KCNQ3-201ENST00000388996 ZNF644Q9H582 1327 aaPredicted RBP14.86□□□□□ -0.03
KCNQ3-201ENST00000388996 SLC4A3P48751 1232 aa14.86□□□□□ -0.03
KCNQ3-201ENST00000388996 DNMBPQ6XZF7 1577 aa14.86□□□□□ -0.03
KCNQ3-201ENST00000388996 CDC45O75419 566 aa14.86□□□□□ -0.03
KCNQ3-201ENST00000388996 IQGAP2Q13576 1575 aa14.85□□□□□ -0.03
KCNQ3-201ENST00000388996 PANK1Q8TE04 598 aa14.85□□□□□ -0.03
KCNQ3-201ENST00000388996 PRG4Q92954 1404 aaPredicted RBP14.84□□□□□ -0.03
KCNQ3-201ENST00000388996 WWC1Q8IX03 1113 aa14.84□□□□□ -0.03
KCNQ3-201ENST00000388996 NUCB2P80303 420 aa14.84□□□□□ -0.03
KCNQ3-201ENST00000388996 KLHL34Q8N239 644 aa14.84□□□□□ -0.03
KCNQ3-201ENST00000388996 C22orf23Q9BZE7 217 aa14.84□□□□□ -0.03
KCNQ3-201ENST00000388996 NAT10Q9H0A0 1025 aaKnown RBP14.84□□□□□ -0.03
KCNQ3-201ENST00000388996 PTPN23Q9H3S7 1636 aa14.84□□□□□ -0.03
KCNQ3-201ENST00000388996 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.84□□□□□ -0.03
KCNQ3-201ENST00000388996 EPS15P42566 896 aa14.84□□□□□ -0.03
KCNQ3-201ENST00000388996 GSE1Q14687 1217 aa14.84□□□□□ -0.03
KCNQ3-201ENST00000388996 HSP90AA2PQ14568 343 aaPredicted RBP14.84□□□□□ -0.03
KCNQ3-201ENST00000388996 NEUROD6Q96NK8 337 aa14.84□□□□□ -0.03
KCNQ3-201ENST00000388996 AIMP1Q12904 312 aaKnown RBP14.84□□□□□ -0.03
KCNQ3-201ENST00000388996 FAM135AQ9P2D6 1515 aa14.84□□□□□ -0.03
KCNQ3-201ENST00000388996 HOMER1Q86YM7 354 aa14.84□□□□□ -0.03
KCNQ3-201ENST00000388996 FYB1O15117 783 aa14.83□□□□□ -0.03
KCNQ3-201ENST00000388996 SART3Q15020 963 aaKnown RBP14.83□□□□□ -0.04
KCNQ3-201ENST00000388996 KIF6Q6ZMV9 814 aa14.83□□□□□ -0.04
KCNQ3-201ENST00000388996 CNTROBQ8N137 903 aa14.83□□□□□ -0.04
KCNQ3-201ENST00000388996 HMGXB3Q12766 1538 aa14.83□□□□□ -0.04
KCNQ3-201ENST00000388996 LNPKQ9C0E8 428 aa14.83□□□□□ -0.04
KCNQ3-201ENST00000388996 WASHC4Q2M389 1173 aa14.83□□□□□ -0.04
KCNQ3-201ENST00000388996 IFT140Q96RY7 1462 aa14.83□□□□□ -0.04
KCNQ3-201ENST00000388996 CCDC27Q2M243 656 aa14.83□□□□□ -0.04
KCNQ3-201ENST00000388996 FSD1Q9BTV5 496 aa14.83□□□□□ -0.04
KCNQ3-201ENST00000388996 HFM1A2PYH4 1435 aa14.82□□□□□ -0.04
KCNQ3-201ENST00000388996 CT47A1Q5JQC4 288 aaPredicted RBP14.82□□□□□ -0.04
KCNQ3-201ENST00000388996 ABTB2Q8N961 1025 aa14.82□□□□□ -0.04
KCNQ3-201ENST00000388996 NLRP6P59044 892 aa14.82□□□□□ -0.04
KCNQ3-201ENST00000388996 NAP1L1P55209 391 aaKnown RBP14.81□□□□□ -0.04
KCNQ3-201ENST00000388996 PSMA5P28066 241 aa14.81□□□□□ -0.04
KCNQ3-201ENST00000388996 GAS2L2Q8NHY3 880 aa14.81□□□□□ -0.04
KCNQ3-201ENST00000388996 SLC3A2P08195 630 aaKnown RBP14.81□□□□□ -0.04
KCNQ3-201ENST00000388996 SASS6Q6UVJ0 657 aa14.81□□□□□ -0.04
KCNQ3-201ENST00000388996 TBC1D2BQ9UPU7 963 aa14.81□□□□□ -0.04
KCNQ3-201ENST00000388996 CHMP5Q9NZZ3 219 aa14.8□□□□□ -0.04
KCNQ3-201ENST00000388996 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.8□□□□□ -0.04
KCNQ3-201ENST00000388996 XBP1P17861 261 aa14.8□□□□□ -0.04
KCNQ3-201ENST00000388996 OLFM4Q6UX06 510 aa14.8□□□□□ -0.04
KCNQ3-201ENST00000388996 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.8□□□□□ -0.04
KCNQ3-201ENST00000388996 NCAPD3P42695 1498 aa14.8□□□□□ -0.04
KCNQ3-201ENST00000388996 AEBP2Q6ZN18 517 aaPredicted RBP14.8□□□□□ -0.04
KCNQ3-201ENST00000388996 SAMD1Q6SPF0 538 aaPredicted RBP14.8□□□□□ -0.04
KCNQ3-201ENST00000388996 GGNBP2Q9H3C7 697 aa14.79□□□□□ -0.04
KCNQ3-201ENST00000388996 ARAP1Q96P48 1450 aa14.79□□□□□ -0.04
KCNQ3-201ENST00000388996 FANCIQ9NVI1 1328 aa14.79□□□□□ -0.04
KCNQ3-201ENST00000388996 TOPBP1Q92547 1522 aa14.79□□□□□ -0.04
KCNQ3-201ENST00000388996 ITSN2Q9NZM3 1697 aa14.79□□□□□ -0.04
KCNQ3-201ENST00000388996 CCDC30Q5VVM6 783 aa14.78□□□□□ -0.04
KCNQ3-201ENST00000388996 TMEM132EQ6IEE7 984 aa14.78□□□□□ -0.04
KCNQ3-201ENST00000388996 PCF11O94913 1555 aaKnown RBP14.78□□□□□ -0.04
KCNQ3-201ENST00000388996 GNL3LQ9NVN8 582 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms