RNA–Protein interactions for RNA: ENST00000384619.1

RNVU1-17-201, Transcript of RNA, variant U1 small nuclear 17, humanhuman

BASIC

Gene RNVU1-17, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-17-201ENST00000384619 PLEKHH1Q9ULM0 1364 aa13.83□□□□□ -0.19
RNVU1-17-201ENST00000384619 ZNF316A6NFI3 1004 aaPredicted RBP13.83□□□□□ -0.2
RNVU1-17-201ENST00000384619 ATF3P18847 181 aa13.83□□□□□ -0.2
RNVU1-17-201ENST00000384619 SRPK2P78362 688 aaKnown RBP13.82□□□□□ -0.2
RNVU1-17-201ENST00000384619 CADPS2Q86UW7 1296 aa13.82□□□□□ -0.2
RNVU1-17-201ENST00000384619 CDK19Q9BWU1 502 aa13.82□□□□□ -0.2
RNVU1-17-201ENST00000384619 SETD1AO15047 1707 aaKnown RBP13.81□□□□□ -0.2
RNVU1-17-201ENST00000384619 NWD1Q149M9 1564 aa13.81□□□□□ -0.2
RNVU1-17-201ENST00000384619 RBM33Q96EV2 1170 aaKnown RBP13.81□□□□□ -0.2
RNVU1-17-201ENST00000384619 MSH6P52701 1360 aa13.81□□□□□ -0.2
RNVU1-17-201ENST00000384619 XRN1Q8IZH2 1706 aaKnown RBP13.79□□□□□ -0.2
RNVU1-17-201ENST00000384619 ADGRL3Q9HAR2 1447 aa13.79□□□□□ -0.2
RNVU1-17-201ENST00000384619 LRRC7Q96NW7 1537 aa13.79□□□□□ -0.2
RNVU1-17-201ENST00000384619 CCDC61Q9Y6R9 512 aa13.78□□□□□ -0.2
RNVU1-17-201ENST00000384619 CHD2O14647 1828 aaKnown RBP13.78□□□□□ -0.2
RNVU1-17-201ENST00000384619 DCCP43146 1447 aa13.77□□□□□ -0.21
RNVU1-17-201ENST00000384619 ATAD2Q6PL18 1390 aa13.77□□□□□ -0.21
RNVU1-17-201ENST00000384619 NUDT16Q96DE0 195 aaKnown RBP13.77□□□□□ -0.21
RNVU1-17-201ENST00000384619 CABP2Q9NPB3 220 aa13.77□□□□□ -0.21
RNVU1-17-201ENST00000384619 KNDC1Q76NI1 1749 aa13.76□□□□□ -0.21
RNVU1-17-201ENST00000384619 C11orf95C9JLR9 678 aaPredicted RBP13.75□□□□□ -0.21
RNVU1-17-201ENST00000384619 TOM1O60784 492 aa13.75□□□□□ -0.21
RNVU1-17-201ENST00000384619 CERKQ8TCT0 537 aa13.75□□□□□ -0.21
RNVU1-17-201ENST00000384619 POLR3GLQ9BT43 218 aa13.75□□□□□ -0.21
RNVU1-17-201ENST00000384619 SLAIN2Q9P270 581 aa13.75□□□□□ -0.21
RNVU1-17-201ENST00000384619 DISP3Q9P2K9 1392 aa13.74□□□□□ -0.21
RNVU1-17-201ENST00000384619 KIF7Q2M1P5 1343 aa13.74□□□□□ -0.21
RNVU1-17-201ENST00000384619 LTBP4Q8N2S1 1624 aa13.74□□□□□ -0.21
RNVU1-17-201ENST00000384619 CCDC7Q96M83 1385 aa13.73□□□□□ -0.21
RNVU1-17-201ENST00000384619 NINLQ9Y2I6 1382 aa13.73□□□□□ -0.21
RNVU1-17-201ENST00000384619 WASHC2AQ641Q2 1341 aa13.73□□□□□ -0.21
RNVU1-17-201ENST00000384619 TMC1Q8TDI8 760 aa13.73□□□□□ -0.21
RNVU1-17-201ENST00000384619 ZNF692Q9BU19 519 aaPredicted RBP13.73□□□□□ -0.21
RNVU1-17-201ENST00000384619 TERF2IPQ9NYB0 399 aa13.73□□□□□ -0.21
RNVU1-17-201ENST00000384619 ANKARQ7Z5J8 1434 aa13.73□□□□□ -0.21
RNVU1-17-201ENST00000384619 PLEKHG3A1L390 1219 aa13.72□□□□□ -0.21
RNVU1-17-201ENST00000384619 NUTM2FA1L443 756 aa13.72□□□□□ -0.21
RNVU1-17-201ENST00000384619 ESCO1Q5FWF5 840 aa13.72□□□□□ -0.21
RNVU1-17-201ENST00000384619 CABP1Q9NZU7 370 aa13.72□□□□□ -0.21
RNVU1-17-201ENST00000384619 ARHGEF28Q8N1W1 1705 aaKnown RBP13.71□□□□□ -0.21
RNVU1-17-201ENST00000384619 IQSEC2Q5JU85 1478 aa13.7□□□□□ -0.22
RNVU1-17-201ENST00000384619 HDGFL2Q7Z4V5 671 aaPredicted RBP13.7□□□□□ -0.22
RNVU1-17-201ENST00000384619 SLC12A5Q9H2X9 1139 aa13.7□□□□□ -0.22
RNVU1-17-201ENST00000384619 PHF8Q9UPP1 1060 aa13.7□□□□□ -0.22
RNVU1-17-201ENST00000384619 ADGRB2O60241 1585 aa13.7□□□□□ -0.22
RNVU1-17-201ENST00000384619 NGDNQ8NEJ9 315 aaKnown RBP13.69□□□□□ -0.22
RNVU1-17-201ENST00000384619 PRR36Q9H6K5 1346 aa13.68□□□□□ -0.22
RNVU1-17-201ENST00000384619 CDC42BPGQ6DT37 1551 aa13.68□□□□□ -0.22
RNVU1-17-201ENST00000384619 TULP4Q9NRJ4 1543 aa13.68□□□□□ -0.22
RNVU1-17-201ENST00000384619 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.67□□□□□ -0.22
RNVU1-17-201ENST00000384619 QRICH2Q9H0J4 1663 aa13.67□□□□□ -0.22
RNVU1-17-201ENST00000384619 UBAP1LF5GYI3 381 aa13.67□□□□□ -0.22
RNVU1-17-201ENST00000384619 ORAI2Q96SN7 254 aa13.67□□□□□ -0.22
RNVU1-17-201ENST00000384619 C1orf167Q5SNV9 1468 aa13.67□□□□□ -0.22
RNVU1-17-201ENST00000384619 PSME1Q06323 249 aa13.66□□□□□ -0.22
RNVU1-17-201ENST00000384619 DDX10Q13206 875 aaKnown RBP13.66□□□□□ -0.22
RNVU1-17-201ENST00000384619 PMFBP1Q8TBY8 1022 aa13.66□□□□□ -0.22
RNVU1-17-201ENST00000384619 PANK3Q9H999 370 aa13.66□□□□□ -0.22
RNVU1-17-201ENST00000384619 STRCP1A6NGW2 1772 aa13.66□□□□□ -0.22
RNVU1-17-201ENST00000384619 ACEP12821 1306 aa13.65□□□□□ -0.22
RNVU1-17-201ENST00000384619 MST1RQ04912 1400 aa13.65□□□□□ -0.22
RNVU1-17-201ENST00000384619 PPIP5K1Q6PFW1 1433 aa13.65□□□□□ -0.22
RNVU1-17-201ENST00000384619 BRD4O60885 1362 aaPredicted RBP13.64□□□□□ -0.23
RNVU1-17-201ENST00000384619 ANKRD36BQ8N2N9 1353 aa13.64□□□□□ -0.23
RNVU1-17-201ENST00000384619 FOXO3O43524 673 aa13.64□□□□□ -0.23
RNVU1-17-201ENST00000384619 BRINP3Q76B58 766 aa13.64□□□□□ -0.23
RNVU1-17-201ENST00000384619 KNSTRNQ9Y448 316 aa13.64□□□□□ -0.23
RNVU1-17-201ENST00000384619 NPHP3Q7Z494 1330 aa13.64□□□□□ -0.23
RNVU1-17-201ENST00000384619 ATP7BP35670 1465 aa13.63□□□□□ -0.23
RNVU1-17-201ENST00000384619 POLR3AO14802 1390 aaPredicted RBP13.63□□□□□ -0.23
RNVU1-17-201ENST00000384619 KTN1Q86UP2 1357 aaKnown RBP13.61□□□□□ -0.23
RNVU1-17-201ENST00000384619 KRT28Q7Z3Y7 464 aa13.61□□□□□ -0.23
RNVU1-17-201ENST00000384619 CPSF1Q10570 1443 aaKnown RBP13.61□□□□□ -0.23
RNVU1-17-201ENST00000384619 PER1O15534 1290 aaPredicted RBP13.6□□□□□ -0.23
RNVU1-17-201ENST00000384619 PIP4K2BP78356 416 aa13.6□□□□□ -0.23
RNVU1-17-201ENST00000384619 NALCNQ8IZF0 1738 aa13.6□□□□□ -0.23
RNVU1-17-201ENST00000384619 CARD14Q9BXL6 1004 aa13.6□□□□□ -0.23
RNVU1-17-201ENST00000384619 CGNL1Q0VF96 1302 aa13.6□□□□□ -0.23
RNVU1-17-201ENST00000384619 SCAF1Q9H7N4 1312 aaKnown RBP13.6□□□□□ -0.23
RNVU1-17-201ENST00000384619 TTC21AQ8NDW8 1320 aa13.59□□□□□ -0.23
RNVU1-17-201ENST00000384619 A0A1W2PP64 1363 aa13.58□□□□□ -0.23
RNVU1-17-201ENST00000384619 FMN2Q9NZ56 1722 aa13.57□□□□□ -0.24
RNVU1-17-201ENST00000384619 PAK3O75914 559 aaPredicted RBP13.57□□□□□ -0.24
RNVU1-17-201ENST00000384619 LRRC59Q96AG4 307 aaKnown RBP13.57□□□□□ -0.24
RNVU1-17-201ENST00000384619 TTC21BQ7Z4L5 1316 aa13.57□□□□□ -0.24
RNVU1-17-201ENST00000384619 EDC4Q6P2E9 1401 aaKnown RBP13.56□□□□□ -0.24
RNVU1-17-201ENST00000384619 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.56□□□□□ -0.24
RNVU1-17-201ENST00000384619 SOS2Q07890 1332 aaPredicted RBP13.56□□□□□ -0.24
RNVU1-17-201ENST00000384619 USP6P35125 1406 aa13.56□□□□□ -0.24
RNVU1-17-201ENST00000384619 NLRP13Q86W25 1043 aa13.55□□□□□ -0.24
RNVU1-17-201ENST00000384619 ABTB2Q8N961 1025 aa13.55□□□□□ -0.24
RNVU1-17-201ENST00000384619 SBNO1A3KN83 1393 aa13.55□□□□□ -0.24
RNVU1-17-201ENST00000384619 CD163L1Q9NR16 1453 aa13.55□□□□□ -0.24
RNVU1-17-201ENST00000384619 FYB1O15117 783 aa13.54□□□□□ -0.24
RNVU1-17-201ENST00000384619 XPCQ01831 940 aaPredicted RBP13.54□□□□□ -0.24
RNVU1-17-201ENST00000384619 NPC1L1Q9UHC9 1359 aa13.54□□□□□ -0.24
RNVU1-17-201ENST00000384619 NLRP6P59044 892 aa13.53□□□□□ -0.24
RNVU1-17-201ENST00000384619 AMER1Q5JTC6 1135 aaPredicted RBP13.53□□□□□ -0.24
RNVU1-17-201ENST00000384619 DIEXFQ68CQ4 756 aaKnown RBP13.53□□□□□ -0.24
RNVU1-17-201ENST00000384619 LMOD2Q6P5Q4 547 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms