RNA–Protein interactions for RNA: ENST00000384526.1

RNU6-880P-201, Transcript of RNA, U6 small nuclear 880, pseudogene, humanhuman

BASIC

Gene RNU6-880P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-880P-201ENST00000384526 ZBTB24O43167 697 aaPredicted RBP4.77□□□□□ -1.65
RNU6-880P-201ENST00000384526 FAM161AQ3B820 660 aa4.77□□□□□ -1.65
RNU6-880P-201ENST00000384526 REPIN1Q9BWE0 567 aaKnown RBP4.77□□□□□ -1.65
RNU6-880P-201ENST00000384526 SKOR1P84550 965 aa4.75□□□□□ -1.65
RNU6-880P-201ENST00000384526 MSS51Q4VC12 460 aa4.75□□□□□ -1.65
RNU6-880P-201ENST00000384526 GPAT2Q6NUI2 795 aa4.75□□□□□ -1.65
RNU6-880P-201ENST00000384526 RNF225M0QZC1 329 aaPredicted RBP4.74□□□□□ -1.65
RNU6-880P-201ENST00000384526 FMNL1O95466 1100 aaPredicted RBP4.74□□□□□ -1.65
RNU6-880P-201ENST00000384526 PTGDRQ13258 359 aa4.74□□□□□ -1.65
RNU6-880P-201ENST00000384526 E2F4Q16254 413 aa4.74□□□□□ -1.65
RNU6-880P-201ENST00000384526 SLC27A5Q9Y2P5 690 aa4.74□□□□□ -1.65
RNU6-880P-201ENST00000384526 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.73□□□□□ -1.65
RNU6-880P-201ENST00000384526 FUT2Q10981 343 aa4.73□□□□□ -1.65
RNU6-880P-201ENST00000384526 DNMT3AQ9Y6K1 912 aaPredicted RBP4.73□□□□□ -1.65
RNU6-880P-201ENST00000384526 CAPN5O15484 640 aaPredicted RBP4.72□□□□□ -1.65
RNU6-880P-201ENST00000384526 ALDH1A1P00352 501 aa4.72□□□□□ -1.65
RNU6-880P-201ENST00000384526 RC3H1Q5TC82 1133 aaKnown RBP4.72□□□□□ -1.65
RNU6-880P-201ENST00000384526 BRICD5Q6PL45 260 aa4.72□□□□□ -1.65
RNU6-880P-201ENST00000384526 RNF19BQ6ZMZ0 732 aa4.72□□□□□ -1.65
RNU6-880P-201ENST00000384526 KRTAP1-3Q8IUG1 177 aa4.72□□□□□ -1.65
RNU6-880P-201ENST00000384526 ZFP42Q96MM3 310 aa4.72□□□□□ -1.65
RNU6-880P-201ENST00000384526 SOBPA7XYQ1 873 aa4.71□□□□□ -1.66
RNU6-880P-201ENST00000384526 IGHA1P01876 353 aa4.71□□□□□ -1.66
RNU6-880P-201ENST00000384526 FECHP22830 423 aa4.71□□□□□ -1.66
RNU6-880P-201ENST00000384526 PSMG3-AS1Q96PY0 264 aa4.71□□□□□ -1.66
RNU6-880P-201ENST00000384526 ADAMTS8Q9UP79 889 aa4.71□□□□□ -1.66
RNU6-880P-201ENST00000384526 SALL2Q9Y467 1007 aaPredicted RBP4.71□□□□□ -1.66
RNU6-880P-201ENST00000384526 MMP16P51512 607 aa4.7□□□□□ -1.66
RNU6-880P-201ENST00000384526 KRT76Q01546 638 aa4.7□□□□□ -1.66
RNU6-880P-201ENST00000384526 ATP6V1AP38606 617 aa4.69□□□□□ -1.66
RNU6-880P-201ENST00000384526 WNT7BP56706 349 aa4.69□□□□□ -1.66
RNU6-880P-201ENST00000384526 PXYLP1Q8TE99 480 aa4.69□□□□□ -1.66
RNU6-880P-201ENST00000384526 SIAH2O43255 324 aa4.68□□□□□ -1.66
RNU6-880P-201ENST00000384526 ADAM23O75077 832 aa4.68□□□□□ -1.66
RNU6-880P-201ENST00000384526 DXOO77932 396 aaKnown RBP4.67□□□□□ -1.66
RNU6-880P-201ENST00000384526 IRS1P35568 1242 aa4.66□□□□□ -1.66
RNU6-880P-201ENST00000384526 MLLT3P42568 568 aaPredicted RBP4.66□□□□□ -1.66
RNU6-880P-201ENST00000384526 FOXK2Q01167 660 aa4.66□□□□□ -1.66
RNU6-880P-201ENST00000384526 RSPH4AQ5TD94 716 aa4.66□□□□□ -1.66
RNU6-880P-201ENST00000384526 RDH13Q8NBN7 331 aa4.66□□□□□ -1.66
RNU6-880P-201ENST00000384526 ZNF385CQ66K41 422 aaPredicted RBP4.65□□□□□ -1.67
RNU6-880P-201ENST00000384526 MRPL14Q6P1L8 145 aaKnown RBP4.65□□□□□ -1.67
RNU6-880P-201ENST00000384526 METTL3Q86U44 580 aaKnown RBP4.65□□□□□ -1.67
RNU6-880P-201ENST00000384526 PURBQ96QR8 312 aaKnown RBP4.65□□□□□ -1.67
RNU6-880P-201ENST00000384526 PPFIA3O75145 1194 aa4.64□□□□□ -1.67
RNU6-880P-201ENST00000384526 WASF2Q9Y6W5 498 aa4.64□□□□□ -1.67
RNU6-880P-201ENST00000384526 GCGRP47871 477 aa4.63□□□□□ -1.67
RNU6-880P-201ENST00000384526 CNTNAP3BQ96NU0 1288 aa4.63□□□□□ -1.67
RNU6-880P-201ENST00000384526 CNTNAP3Q9BZ76 1288 aa4.63□□□□□ -1.67
RNU6-880P-201ENST00000384526 DDX11L8A8MPP1 907 aa4.62□□□□□ -1.67
RNU6-880P-201ENST00000384526 OATP04181 439 aa4.62□□□□□ -1.67
RNU6-880P-201ENST00000384526 KANK3Q6NY19 840 aa4.62□□□□□ -1.67
RNU6-880P-201ENST00000384526 CCDC24Q8N4L8 307 aa4.62□□□□□ -1.67
RNU6-880P-201ENST00000384526 SVOPQ8N4V2 548 aa4.62□□□□□ -1.67
RNU6-880P-201ENST00000384526 GPR161Q8N6U8 529 aaKnown RBP4.62□□□□□ -1.67
RNU6-880P-201ENST00000384526 EHBP1Q8NDI1 1231 aa4.62□□□□□ -1.67
RNU6-880P-201ENST00000384526 ARHGEF15O94989 841 aa4.61□□□□□ -1.67
RNU6-880P-201ENST00000384526 ITGB2P05107 769 aa4.61□□□□□ -1.67
RNU6-880P-201ENST00000384526 TIMP2P16035 220 aa4.61□□□□□ -1.67
RNU6-880P-201ENST00000384526 SCARF1Q14162 830 aa4.61□□□□□ -1.67
RNU6-880P-201ENST00000384526 LCE3BQ5TA77 95 aa4.61□□□□□ -1.67
RNU6-880P-201ENST00000384526 Q8N3U1 123 aa4.61□□□□□ -1.67
RNU6-880P-201ENST00000384526 WHAMMQ8TF30 809 aa4.61□□□□□ -1.67
RNU6-880P-201ENST00000384526 TLL2Q9Y6L7 1015 aa4.61□□□□□ -1.67
RNU6-880P-201ENST00000384526 NLRP7Q8WX94 980 aa4.6□□□□□ -1.67
RNU6-880P-201ENST00000384526 SPOCK3Q9BQ16 436 aa4.6□□□□□ -1.67
RNU6-880P-201ENST00000384526 DAXXQ9UER7 740 aaPredicted RBP4.6□□□□□ -1.67
RNU6-880P-201ENST00000384526 NUTM2FA1L443 756 aa4.59□□□□□ -1.67
RNU6-880P-201ENST00000384526 Q3C1V9 767 aa4.59□□□□□ -1.67
RNU6-880P-201ENST00000384526 RNFT1Q5M7Z0 435 aa4.59□□□□□ -1.67
RNU6-880P-201ENST00000384526 USB1Q9BQ65 265 aaKnown RBP4.59□□□□□ -1.67
RNU6-880P-201ENST00000384526 KRTAP4-12Q9BQ66 201 aa4.59□□□□□ -1.67
RNU6-880P-201ENST00000384526 MSTNO14793 375 aa4.58□□□□□ -1.68
RNU6-880P-201ENST00000384526 MAN1A2O60476 641 aa4.58□□□□□ -1.68
RNU6-880P-201ENST00000384526 FCHSD2O94868 740 aa4.58□□□□□ -1.68
RNU6-880P-201ENST00000384526 PROCP04070 461 aa4.58□□□□□ -1.68
RNU6-880P-201ENST00000384526 NNTQ13423 1086 aa4.58□□□□□ -1.68
RNU6-880P-201ENST00000384526 PLA2G4EQ3MJ16 856 aa4.58□□□□□ -1.68
RNU6-880P-201ENST00000384526 COL25A1Q9BXS0 654 aaPredicted RBP4.58□□□□□ -1.68
RNU6-880P-201ENST00000384526 ADH1CP00326 375 aa4.57□□□□□ -1.68
RNU6-880P-201ENST00000384526 WDR4P57081 412 aaKnown RBP4.57□□□□□ -1.68
RNU6-880P-201ENST00000384526 SH3BP2P78314 561 aa4.57□□□□□ -1.68
RNU6-880P-201ENST00000384526 PTCRAQ6ISU1 281 aaPredicted RBP4.57□□□□□ -1.68
RNU6-880P-201ENST00000384526 KLF16Q9BXK1 252 aaPredicted RBP4.57□□□□□ -1.68
RNU6-880P-201ENST00000384526 DCAF8L2P0C7V8 631 aa4.56□□□□□ -1.68
RNU6-880P-201ENST00000384526 SLURP2P0DP57 97 aa4.56□□□□□ -1.68
RNU6-880P-201ENST00000384526 KRTAP9-9Q9BYP9 154 aa4.56□□□□□ -1.68
RNU6-880P-201ENST00000384526 KRTAP9-4Q9BYQ2 154 aa4.56□□□□□ -1.68
RNU6-880P-201ENST00000384526 WDR70Q9NW82 654 aa4.56□□□□□ -1.68
RNU6-880P-201ENST00000384526 DNMT3LQ9UJW3 386 aa4.56□□□□□ -1.68
RNU6-880P-201ENST00000384526 JUNDP17535 347 aa4.55□□□□□ -1.68
RNU6-880P-201ENST00000384526 MARSP56192 900 aaKnown RBP4.55□□□□□ -1.68
RNU6-880P-201ENST00000384526 GRIPAP1Q4V328 841 aa4.55□□□□□ -1.68
RNU6-880P-201ENST00000384526 C6orf118Q5T5N4 469 aa4.55□□□□□ -1.68
RNU6-880P-201ENST00000384526 SULF1Q8IWU6 871 aa4.55□□□□□ -1.68
RNU6-880P-201ENST00000384526 SCARF2Q96GP6 870 aaPredicted RBP4.55□□□□□ -1.68
RNU6-880P-201ENST00000384526 K7ELQ4 463 aaPredicted RBP4.54□□□□□ -1.68
RNU6-880P-201ENST00000384526 HLA-CQ95604 372 aa4.54□□□□□ -1.68
RNU6-880P-201ENST00000384526 DCAF5Q96JK2 942 aa4.54□□□□□ -1.68
RNU6-880P-201ENST00000384526 ZFAND3Q9H8U3 227 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms