RNA–Protein interactions for RNA: ENST00000383861.1

RNU1-28P-201, Transcript of RNA, U1 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU1-28P, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-28P-201ENST00000383861 SAFB2Q14151 953 aaKnown RBP eCLIP12.15□□□□□ -0.46
RNU1-28P-201ENST00000383861 WAPLQ7Z5K2 1190 aa12.15□□□□□ -0.46
RNU1-28P-201ENST00000383861 KCNA6P17658 529 aa12.14□□□□□ -0.47
RNU1-28P-201ENST00000383861 SRPK2P78362 688 aaKnown RBP12.14□□□□□ -0.47
RNU1-28P-201ENST00000383861 ROBO2Q9HCK4 1378 aa12.14□□□□□ -0.47
RNU1-28P-201ENST00000383861 WASLO00401 505 aaPredicted RBP12.13□□□□□ -0.47
RNU1-28P-201ENST00000383861 MIER1Q8N108 512 aa12.13□□□□□ -0.47
RNU1-28P-201ENST00000383861 CDK19Q9BWU1 502 aa12.13□□□□□ -0.47
RNU1-28P-201ENST00000383861 KTN1Q86UP2 1357 aaKnown RBP12.13□□□□□ -0.47
RNU1-28P-201ENST00000383861 TULP4Q9NRJ4 1543 aa12.12□□□□□ -0.47
RNU1-28P-201ENST00000383861 XRN1Q8IZH2 1706 aaKnown RBP12.12□□□□□ -0.47
RNU1-28P-201ENST00000383861 PANK3Q9H999 370 aa12.12□□□□□ -0.47
RNU1-28P-201ENST00000383861 DMRT2Q9Y5R5 561 aa12.12□□□□□ -0.47
RNU1-28P-201ENST00000383861 PLEKHH1Q9ULM0 1364 aa12.12□□□□□ -0.47
RNU1-28P-201ENST00000383861 HSPA2P54652 639 aa12.11□□□□□ -0.47
RNU1-28P-201ENST00000383861 KNSTRNQ9Y448 316 aa12.11□□□□□ -0.47
RNU1-28P-201ENST00000383861 ADGRB2O60241 1585 aa12.1□□□□□ -0.47
RNU1-28P-201ENST00000383861 CHD2O14647 1828 aaKnown RBP12.1□□□□□ -0.47
RNU1-28P-201ENST00000383861 CCER2I3L3R5 266 aa12.1□□□□□ -0.47
RNU1-28P-201ENST00000383861 PER1O15534 1290 aaPredicted RBP12.1□□□□□ -0.47
RNU1-28P-201ENST00000383861 TMC1Q8TDI8 760 aa12.1□□□□□ -0.47
RNU1-28P-201ENST00000383861 CABP2Q9NPB3 220 aa12.1□□□□□ -0.47
RNU1-28P-201ENST00000383861 TERF2IPQ9NYB0 399 aa12.1□□□□□ -0.47
RNU1-28P-201ENST00000383861 RALBP1Q15311 655 aa12.09□□□□□ -0.47
RNU1-28P-201ENST00000383861 NWD1Q149M9 1564 aa12.09□□□□□ -0.47
RNU1-28P-201ENST00000383861 NKTRP30414 1462 aaKnown RBP12.08□□□□□ -0.47
RNU1-28P-201ENST00000383861 PRKRIP1Q9H875 184 aaPredicted RBP12.08□□□□□ -0.48
RNU1-28P-201ENST00000383861 CCDC61Q9Y6R9 512 aa12.08□□□□□ -0.48
RNU1-28P-201ENST00000383861 NCOA3Q9Y6Q9 1424 aa12.08□□□□□ -0.48
RNU1-28P-201ENST00000383861 ANKRD36BQ8N2N9 1353 aa12.07□□□□□ -0.48
RNU1-28P-201ENST00000383861 NPC1L1Q9UHC9 1359 aa12.07□□□□□ -0.48
RNU1-28P-201ENST00000383861 HDGFL2Q7Z4V5 671 aaPredicted RBP12.07□□□□□ -0.48
RNU1-28P-201ENST00000383861 SLC12A5Q9H2X9 1139 aa12.07□□□□□ -0.48
RNU1-28P-201ENST00000383861 PROSER2Q86WR7 435 aaPredicted RBP12.06□□□□□ -0.48
RNU1-28P-201ENST00000383861 NUDT16Q96DE0 195 aaKnown RBP12.06□□□□□ -0.48
RNU1-28P-201ENST00000383861 MYOM1P52179 1685 aa12.06□□□□□ -0.48
RNU1-28P-201ENST00000383861 ZNF692Q9BU19 519 aaPredicted RBP12.05□□□□□ -0.48
RNU1-28P-201ENST00000383861 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.05□□□□□ -0.48
RNU1-28P-201ENST00000383861 ANKARQ7Z5J8 1434 aa12.04□□□□□ -0.48
RNU1-28P-201ENST00000383861 ATP7BP35670 1465 aa12.04□□□□□ -0.48
RNU1-28P-201ENST00000383861 CABP1Q9NZU7 370 aa12.04□□□□□ -0.48
RNU1-28P-201ENST00000383861 ADGRL3Q9HAR2 1447 aa12.03□□□□□ -0.48
RNU1-28P-201ENST00000383861 STRCQ7RTU9 1775 aa12.03□□□□□ -0.48
RNU1-28P-201ENST00000383861 C14orf37Q86TY3 774 aa12.03□□□□□ -0.48
RNU1-28P-201ENST00000383861 CGNL1Q0VF96 1302 aa12.03□□□□□ -0.48
RNU1-28P-201ENST00000383861 NSD2O96028 1365 aa12.03□□□□□ -0.48
RNU1-28P-201ENST00000383861 PPIP5K1Q6PFW1 1433 aa12.03□□□□□ -0.48
RNU1-28P-201ENST00000383861 CDC42BPGQ6DT37 1551 aa12.02□□□□□ -0.49
RNU1-28P-201ENST00000383861 PLEKHG3A1L390 1219 aa12.02□□□□□ -0.49
RNU1-28P-201ENST00000383861 AMER1Q5JTC6 1135 aaPredicted RBP12.02□□□□□ -0.49
RNU1-28P-201ENST00000383861 CARD14Q9BXL6 1004 aa12.02□□□□□ -0.49
RNU1-28P-201ENST00000383861 C19orf44Q9H6X5 657 aa12.02□□□□□ -0.49
RNU1-28P-201ENST00000383861 MYBBP1AQ9BQG0 1328 aaKnown RBP12.01□□□□□ -0.49
RNU1-28P-201ENST00000383861 PARD3Q8TEW0 1356 aa12.01□□□□□ -0.49
RNU1-28P-201ENST00000383861 NSD3Q9BZ95 1437 aa12.01□□□□□ -0.49
RNU1-28P-201ENST00000383861 CC2D1BQ5T0F9 858 aaKnown RBP12□□□□□ -0.49
RNU1-28P-201ENST00000383861 A0A1W2PP64 1363 aa12□□□□□ -0.49
RNU1-28P-201ENST00000383861 CPSF1Q10570 1443 aaKnown RBP12□□□□□ -0.49
RNU1-28P-201ENST00000383861 USP32Q8NFA0 1604 aa12□□□□□ -0.49
RNU1-28P-201ENST00000383861 PRR36Q9H6K5 1346 aa11.99□□□□□ -0.49
RNU1-28P-201ENST00000383861 DCCP43146 1447 aa11.99□□□□□ -0.49
RNU1-28P-201ENST00000383861 CD163L1Q9NR16 1453 aa11.98□□□□□ -0.49
RNU1-28P-201ENST00000383861 EDC4Q6P2E9 1401 aaKnown RBP11.98□□□□□ -0.49
RNU1-28P-201ENST00000383861 BRD4O60885 1362 aaPredicted RBP11.98□□□□□ -0.49
RNU1-28P-201ENST00000383861 TMEM94Q12767 1356 aa11.98□□□□□ -0.49
RNU1-28P-201ENST00000383861 ATF3P18847 181 aa11.98□□□□□ -0.49
RNU1-28P-201ENST00000383861 NLRP13Q86W25 1043 aa11.98□□□□□ -0.49
RNU1-28P-201ENST00000383861 ITSN1Q15811 1721 aa11.97□□□□□ -0.49
RNU1-28P-201ENST00000383861 CADPS2Q86UW7 1296 aa11.97□□□□□ -0.49
RNU1-28P-201ENST00000383861 MORC1Q86VD1 984 aa11.97□□□□□ -0.49
RNU1-28P-201ENST00000383861 NALCNQ8IZF0 1738 aa11.97□□□□□ -0.49
RNU1-28P-201ENST00000383861 FMN2Q9NZ56 1722 aa11.97□□□□□ -0.49
RNU1-28P-201ENST00000383861 TOPAZ1Q8N9V7 1692 aa11.97□□□□□ -0.49
RNU1-28P-201ENST00000383861 POLR3AO14802 1390 aaPredicted RBP11.96□□□□□ -0.49
RNU1-28P-201ENST00000383861 MSH6P52701 1360 aa11.96□□□□□ -0.49
RNU1-28P-201ENST00000383861 ACEP12821 1306 aa11.96□□□□□ -0.49
RNU1-28P-201ENST00000383861 NGDNQ8NEJ9 315 aaKnown RBP11.96□□□□□ -0.49
RNU1-28P-201ENST00000383861 MRS2Q9HD23 443 aa11.96□□□□□ -0.49
RNU1-28P-201ENST00000383861 NUTM2FA1L443 756 aa11.95□□□□□ -0.5
RNU1-28P-201ENST00000383861 CNGB1Q14028 1251 aaPredicted RBP11.95□□□□□ -0.5
RNU1-28P-201ENST00000383861 AEBP2Q6ZN18 517 aaPredicted RBP11.95□□□□□ -0.5
RNU1-28P-201ENST00000383861 PHF8Q9UPP1 1060 aa11.95□□□□□ -0.5
RNU1-28P-201ENST00000383861 TTC21AQ8NDW8 1320 aa11.94□□□□□ -0.5
RNU1-28P-201ENST00000383861 ZNF335Q9H4Z2 1342 aaPredicted RBP11.94□□□□□ -0.5
RNU1-28P-201ENST00000383861 RBM33Q96EV2 1170 aaKnown RBP11.94□□□□□ -0.5
RNU1-28P-201ENST00000383861 LRRC7Q96NW7 1537 aa11.93□□□□□ -0.5
RNU1-28P-201ENST00000383861 FYB1O15117 783 aa11.93□□□□□ -0.5
RNU1-28P-201ENST00000383861 PPP2R1AP30153 589 aa11.93□□□□□ -0.5
RNU1-28P-201ENST00000383861 USP6P35125 1406 aa11.93□□□□□ -0.5
RNU1-28P-201ENST00000383861 STRCP1A6NGW2 1772 aa11.92□□□□□ -0.5
RNU1-28P-201ENST00000383861 SCAF1Q9H7N4 1312 aaKnown RBP11.92□□□□□ -0.5
RNU1-28P-201ENST00000383861 ESCO1Q5FWF5 840 aa11.92□□□□□ -0.5
RNU1-28P-201ENST00000383861 PMFBP1Q8TBY8 1022 aa11.92□□□□□ -0.5
RNU1-28P-201ENST00000383861 AKAP12Q02952 1782 aa11.92□□□□□ -0.5
RNU1-28P-201ENST00000383861 MON2Q7Z3U7 1717 aa11.91□□□□□ -0.5
RNU1-28P-201ENST00000383861 TTC21BQ7Z4L5 1316 aa11.91□□□□□ -0.5
RNU1-28P-201ENST00000383861 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.91□□□□□ -0.5
RNU1-28P-201ENST00000383861 COG3Q96JB2 828 aa11.91□□□□□ -0.5
RNU1-28P-201ENST00000383861 C1orf167Q5SNV9 1468 aa11.9□□□□□ -0.5
RNU1-28P-201ENST00000383861 GGNBP2Q9H3C7 697 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms