RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 NAP1L2Q9ULW6 460 aaPredicted RBP5.95□□□□□ -1.46
PTPRD-203ENST00000381196 SHROOM2Q13796 1616 aa5.95□□□□□ -1.46
PTPRD-203ENST00000381196 TUBBP07437 444 aa5.95□□□□□ -1.46
PTPRD-203ENST00000381196 AK7Q96M32 723 aa5.95□□□□□ -1.46
PTPRD-203ENST00000381196 CWC22Q9HCG8 908 aaKnown RBP5.95□□□□□ -1.46
PTPRD-203ENST00000381196 KIAA0556O60303 1618 aa5.95□□□□□ -1.46
PTPRD-203ENST00000381196 REC8O95072 547 aa5.95□□□□□ -1.46
PTPRD-203ENST00000381196 MCM3P25205 808 aa5.95□□□□□ -1.46
PTPRD-203ENST00000381196 ARHGEF5Q12774 1597 aa5.94□□□□□ -1.46
PTPRD-203ENST00000381196 AEBP1Q8IUX7 1158 aa5.94□□□□□ -1.46
PTPRD-203ENST00000381196 MAGI1Q96QZ7 1491 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-203ENST00000381196 HMGB1P1B2RPK0 211 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-203ENST00000381196 E9PSI1 815 aa5.94□□□□□ -1.46
PTPRD-203ENST00000381196 KRI1Q8N9T8 703 aaKnown RBP5.94□□□□□ -1.46
PTPRD-203ENST00000381196 UHRF1BP1Q6BDS2 1440 aa5.94□□□□□ -1.46
PTPRD-203ENST00000381196 HMMRO75330 724 aa5.94□□□□□ -1.46
PTPRD-203ENST00000381196 RALGAPBQ86X10 1494 aa5.94□□□□□ -1.46
PTPRD-203ENST00000381196 NCOA1Q15788 1441 aa5.94□□□□□ -1.46
PTPRD-203ENST00000381196 IBTKQ9P2D0 1353 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-203ENST00000381196 RRP1P56182 461 aaKnown RBP5.94□□□□□ -1.46
PTPRD-203ENST00000381196 DDX11Q96FC9 970 aa5.93□□□□□ -1.46
PTPRD-203ENST00000381196 DNAJC2Q99543 621 aaKnown RBP5.93□□□□□ -1.46
PTPRD-203ENST00000381196 POTEB2H3BUK9 544 aa5.93□□□□□ -1.46
PTPRD-203ENST00000381196 RBM25P49756 843 aaKnown RBP5.93□□□□□ -1.46
PTPRD-203ENST00000381196 DCAF11Q8TEB1 546 aa5.93□□□□□ -1.46
PTPRD-203ENST00000381196 TAF7LQ5H9L4 462 aa5.93□□□□□ -1.46
PTPRD-203ENST00000381196 HOXA7P31268 230 aaPredicted RBP5.93□□□□□ -1.46
PTPRD-203ENST00000381196 ARHGEF11O15085 1522 aa5.93□□□□□ -1.46
PTPRD-203ENST00000381196 KANK4Q5T7N3 995 aaPredicted RBP5.93□□□□□ -1.46
PTPRD-203ENST00000381196 NOL10Q9BSC4 688 aaKnown RBP5.93□□□□□ -1.46
PTPRD-203ENST00000381196 TERF2IPQ9NYB0 399 aa5.93□□□□□ -1.46
PTPRD-203ENST00000381196 SMAP1Q8IYB5 467 aaPredicted RBP5.93□□□□□ -1.46
PTPRD-203ENST00000381196 ATF3P18847 181 aa5.93□□□□□ -1.46
PTPRD-203ENST00000381196 DCTN1Q14203 1278 aa5.93□□□□□ -1.46
PTPRD-203ENST00000381196 PRM3Q9NNZ6 103 aa5.93□□□□□ -1.46
PTPRD-203ENST00000381196 USP47Q96K76 1375 aa5.93□□□□□ -1.46
PTPRD-203ENST00000381196 ANKRD30BQ9BXX2 1392 aa5.92□□□□□ -1.46
PTPRD-203ENST00000381196 GORABQ5T7V8 394 aa5.92□□□□□ -1.46
PTPRD-203ENST00000381196 V9GYY5 206 aaPredicted RBP5.92□□□□□ -1.46
PTPRD-203ENST00000381196 RPRD2Q5VT52 1461 aaKnown RBP5.92□□□□□ -1.46
PTPRD-203ENST00000381196 NAIPQ13075 1403 aa5.92□□□□□ -1.46
PTPRD-203ENST00000381196 CLCN1P35523 988 aa5.92□□□□□ -1.46
PTPRD-203ENST00000381196 IQCEQ6IPM2 695 aa5.92□□□□□ -1.46
PTPRD-203ENST00000381196 NAT10Q9H0A0 1025 aaKnown RBP5.92□□□□□ -1.46
PTPRD-203ENST00000381196 KDM5AP29375 1690 aaKnown RBP5.92□□□□□ -1.46
PTPRD-203ENST00000381196 GBP2P32456 591 aaPredicted RBP5.92□□□□□ -1.46
PTPRD-203ENST00000381196 PDE4AP27815 886 aa5.92□□□□□ -1.46
PTPRD-203ENST00000381196 AMPHP49418 695 aa5.92□□□□□ -1.46
PTPRD-203ENST00000381196 FAM13BQ9NYF5 915 aa5.92□□□□□ -1.46
PTPRD-203ENST00000381196 PTPRGP23470 1445 aa5.92□□□□□ -1.46
PTPRD-203ENST00000381196 MYO5CQ9NQX4 1742 aa5.91□□□□□ -1.46
PTPRD-203ENST00000381196 PDE3AQ14432 1141 aa5.91□□□□□ -1.46
PTPRD-203ENST00000381196 ZSCAN30Q86W11 494 aa5.91□□□□□ -1.46
PTPRD-203ENST00000381196 PODXL2Q9NZ53 605 aa5.91□□□□□ -1.46
PTPRD-203ENST00000381196 ADGRL2O95490 1459 aa5.91□□□□□ -1.46
PTPRD-203ENST00000381196 PLXNC1O60486 1568 aa5.91□□□□□ -1.46
PTPRD-203ENST00000381196 FRAT2O75474 233 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-203ENST00000381196 GPATCH3Q96I76 525 aa5.91□□□□□ -1.46
PTPRD-203ENST00000381196 CHMP3Q9Y3E7 222 aa5.91□□□□□ -1.46
PTPRD-203ENST00000381196 LRRIQ1Q96JM4 1722 aa5.91□□□□□ -1.46
PTPRD-203ENST00000381196 HOOK1Q9UJC3 728 aaKnown RBP5.91□□□□□ -1.46
PTPRD-203ENST00000381196 NSD2O96028 1365 aa5.91□□□□□ -1.46
PTPRD-203ENST00000381196 STK31Q9BXU1 1019 aa5.9□□□□□ -1.46
PTPRD-203ENST00000381196 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.9□□□□□ -1.46
PTPRD-203ENST00000381196 FAM135AQ9P2D6 1515 aa5.9□□□□□ -1.46
PTPRD-203ENST00000381196 KIAA1107Q9UPP5 1409 aa5.9□□□□□ -1.46
PTPRD-203ENST00000381196 LTV1Q96GA3 475 aaPredicted RBP5.9□□□□□ -1.46
PTPRD-203ENST00000381196 VGFO15240 615 aaPredicted RBP5.9□□□□□ -1.46
PTPRD-203ENST00000381196 FEZ1Q99689 392 aa5.9□□□□□ -1.47
PTPRD-203ENST00000381196 INCENPQ9NQS7 918 aa5.9□□□□□ -1.47
PTPRD-203ENST00000381196 KIAA0586Q9BVV6 1533 aa5.9□□□□□ -1.47
PTPRD-203ENST00000381196 MAST1Q9Y2H9 1570 aa5.9□□□□□ -1.47
PTPRD-203ENST00000381196 EIF3JO75822 258 aaKnown RBP5.9□□□□□ -1.47
PTPRD-203ENST00000381196 JPH4Q96JJ6 628 aa5.9□□□□□ -1.47
PTPRD-203ENST00000381196 CC2D1BQ5T0F9 858 aaKnown RBP5.9□□□□□ -1.47
PTPRD-203ENST00000381196 PKD2Q13563 968 aa5.9□□□□□ -1.47
PTPRD-203ENST00000381196 RABEP1Q15276 862 aa5.9□□□□□ -1.47
PTPRD-203ENST00000381196 GNL2Q13823 731 aaKnown RBP5.89□□□□□ -1.47
PTPRD-203ENST00000381196 NUTM2DQ5VT03 806 aaPredicted RBP5.89□□□□□ -1.47
PTPRD-203ENST00000381196 PAXIP1Q6ZW49 1069 aaPredicted RBP5.89□□□□□ -1.47
PTPRD-203ENST00000381196 CFAP74Q9C0B2 1584 aa5.89□□□□□ -1.47
PTPRD-203ENST00000381196 PDCP20941 246 aa5.89□□□□□ -1.47
PTPRD-203ENST00000381196 CGNQ9P2M7 1197 aaKnown RBP5.89□□□□□ -1.47
PTPRD-203ENST00000381196 MYO6Q9UM54 1294 aa5.89□□□□□ -1.47
PTPRD-203ENST00000381196 CTDP1Q9Y5B0 961 aaPredicted RBP5.89□□□□□ -1.47
PTPRD-203ENST00000381196 PIP4K2AP48426 406 aaPredicted RBP5.89□□□□□ -1.47
PTPRD-203ENST00000381196 ZRSR2Q15696 482 aaKnown RBP5.89□□□□□ -1.47
PTPRD-203ENST00000381196 FRAT1Q92837 279 aaPredicted RBP5.89□□□□□ -1.47
PTPRD-203ENST00000381196 TRIM34Q9BYJ4 488 aa5.89□□□□□ -1.47
PTPRD-203ENST00000381196 GBP3Q9H0R5 595 aa5.89□□□□□ -1.47
PTPRD-203ENST00000381196 NUP155O75694 1391 aa5.89□□□□□ -1.47
PTPRD-203ENST00000381196 IVLP07476 585 aa5.89□□□□□ -1.47
PTPRD-203ENST00000381196 JAKMIP3Q5VZ66 844 aa5.89□□□□□ -1.47
PTPRD-203ENST00000381196 NUTM1Q86Y26 1132 aa5.89□□□□□ -1.47
PTPRD-203ENST00000381196 NUTM2FA1L443 756 aa5.89□□□□□ -1.47
PTPRD-203ENST00000381196 HSPA5P11021 654 aaKnown RBP5.89□□□□□ -1.47
PTPRD-203ENST00000381196 LRRFIP1Q32MZ4 808 aaKnown RBP5.89□□□□□ -1.47
PTPRD-203ENST00000381196 SYTL4Q96C24 671 aaPredicted RBP5.89□□□□□ -1.47
PTPRD-203ENST00000381196 PRKRIP1Q9H875 184 aaPredicted RBP5.89□□□□□ -1.47
PTPRD-203ENST00000381196 ABCC11Q96J66 1382 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms