RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 NSD3Q9BZ95 1437 aa18.98■□□□□ 0.63
CLCN4-201ENST00000380829 CABP2Q9NPB3 220 aa18.98■□□□□ 0.63
CLCN4-201ENST00000380829 ALKQ9UM73 1620 aa18.98■□□□□ 0.63
CLCN4-201ENST00000380829 YTHDC2Q9H6S0 1430 aaKnown RBP18.97■□□□□ 0.63
CLCN4-201ENST00000380829 RIMS2Q9UQ26 1411 aa18.96■□□□□ 0.63
CLCN4-201ENST00000380829 PRAM1Q96QH2 718 aa18.96■□□□□ 0.63
CLCN4-201ENST00000380829 PTPRMP28827 1452 aa18.96■□□□□ 0.63
CLCN4-201ENST00000380829 WDR43Q15061 677 aaKnown RBP eCLIP18.95■□□□□ 0.62
CLCN4-201ENST00000380829 MINK1Q8N4C8 1332 aaPredicted RBP18.94■□□□□ 0.62
CLCN4-201ENST00000380829 INSRP06213 1382 aa18.94■□□□□ 0.62
CLCN4-201ENST00000380829 CCDC136Q96JN2 1154 aa18.94■□□□□ 0.62
CLCN4-201ENST00000380829 POGKQ9P215 609 aa18.94■□□□□ 0.62
CLCN4-201ENST00000380829 PAK3O75914 559 aaPredicted RBP18.92■□□□□ 0.62
CLCN4-201ENST00000380829 SRPK2P78362 688 aaKnown RBP18.92■□□□□ 0.62
CLCN4-201ENST00000380829 TNNT2P45379 298 aaPredicted RBP18.91■□□□□ 0.62
CLCN4-201ENST00000380829 CDCA7LQ96GN5 454 aa18.91■□□□□ 0.62
CLCN4-201ENST00000380829 PUS7Q96PZ0 661 aaKnown RBP18.91■□□□□ 0.62
CLCN4-201ENST00000380829 NOP58Q9Y2X3 529 aaKnown RBP18.9■□□□□ 0.62
CLCN4-201ENST00000380829 TNRQ92752 1358 aa18.9■□□□□ 0.62
CLCN4-201ENST00000380829 MORC1Q86VD1 984 aa18.9■□□□□ 0.62
CLCN4-201ENST00000380829 ANKRD36BQ8N2N9 1353 aa18.89■□□□□ 0.61
CLCN4-201ENST00000380829 ERICH6BQ5W0A0 696 aa18.89■□□□□ 0.61
CLCN4-201ENST00000380829 PDE3BQ13370 1112 aa18.88■□□□□ 0.61
CLCN4-201ENST00000380829 CGNL1Q0VF96 1302 aa18.88■□□□□ 0.61
CLCN4-201ENST00000380829 RNF123Q5XPI4 1314 aa18.87■□□□□ 0.61
CLCN4-201ENST00000380829 PPP4R2Q9NY27 417 aa18.87■□□□□ 0.61
CLCN4-201ENST00000380829 CCDC146Q8IYE0 955 aa18.86■□□□□ 0.61
CLCN4-201ENST00000380829 WAPLQ7Z5K2 1190 aa18.86■□□□□ 0.61
CLCN4-201ENST00000380829 SETD1AO15047 1707 aaKnown RBP18.86■□□□□ 0.61
CLCN4-201ENST00000380829 CEBPAP49715 358 aaPredicted RBP18.85■□□□□ 0.61
CLCN4-201ENST00000380829 B4GALNT3Q6L9W6 998 aa18.85■□□□□ 0.61
CLCN4-201ENST00000380829 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.85■□□□□ 0.61
CLCN4-201ENST00000380829 IL27Q8NEV9 243 aa18.85■□□□□ 0.61
CLCN4-201ENST00000380829 A0A1W2PP64 1363 aa18.85■□□□□ 0.61
CLCN4-201ENST00000380829 USP32Q8NFA0 1604 aa18.84■□□□□ 0.61
CLCN4-201ENST00000380829 NRXN3Q9Y4C0 1643 aa18.84■□□□□ 0.61
CLCN4-201ENST00000380829 RTN4Q9NQC3 1192 aaKnown RBP18.84■□□□□ 0.61
CLCN4-201ENST00000380829 PLEKHH1Q9ULM0 1364 aa18.84■□□□□ 0.61
CLCN4-201ENST00000380829 ATAD2Q6PL18 1390 aa18.83■□□□□ 0.61
CLCN4-201ENST00000380829 PLPPR3Q6T4P5 718 aa18.83■□□□□ 0.61
CLCN4-201ENST00000380829 CDK19Q9BWU1 502 aa18.83■□□□□ 0.61
CLCN4-201ENST00000380829 METP08581 1390 aa18.83■□□□□ 0.6
CLCN4-201ENST00000380829 RCAN3Q9UKA8 241 aa18.82■□□□□ 0.6
CLCN4-201ENST00000380829 POLR3AO14802 1390 aaPredicted RBP18.81■□□□□ 0.6
CLCN4-201ENST00000380829 NINLQ9Y2I6 1382 aa18.81■□□□□ 0.6
CLCN4-201ENST00000380829 DLC1Q96QB1 1528 aa18.81■□□□□ 0.6
CLCN4-201ENST00000380829 TMEM2Q9UHN6 1383 aa18.8■□□□□ 0.6
CLCN4-201ENST00000380829 UBR1Q8IWV7 1749 aa18.8■□□□□ 0.6
CLCN4-201ENST00000380829 ABCC11Q96J66 1382 aa18.79■□□□□ 0.6
CLCN4-201ENST00000380829 HDGFP51858 240 aaKnown RBP18.79■□□□□ 0.6
CLCN4-201ENST00000380829 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.79■□□□□ 0.6
CLCN4-201ENST00000380829 APAF1O14727 1248 aa18.79■□□□□ 0.6
CLCN4-201ENST00000380829 MTHFSP49914 203 aa18.79■□□□□ 0.6
CLCN4-201ENST00000380829 TXNDC2Q86VQ3 553 aa18.79■□□□□ 0.6
CLCN4-201ENST00000380829 CD163L1Q9NR16 1453 aa18.78■□□□□ 0.6
CLCN4-201ENST00000380829 TERF2IPQ9NYB0 399 aa18.78■□□□□ 0.6
CLCN4-201ENST00000380829 NSD2O96028 1365 aa18.78■□□□□ 0.6
CLCN4-201ENST00000380829 RRP1P56182 461 aaKnown RBP18.78■□□□□ 0.6
CLCN4-201ENST00000380829 CABP1Q9NZU7 370 aa18.78■□□□□ 0.6
CLCN4-201ENST00000380829 GGNBP2Q9H3C7 697 aa18.77■□□□□ 0.6
CLCN4-201ENST00000380829 ZNF521Q96K83 1311 aa18.76■□□□□ 0.59
CLCN4-201ENST00000380829 SHPRHQ149N8 1683 aa18.75■□□□□ 0.59
CLCN4-201ENST00000380829 LTKP29376 864 aa18.74■□□□□ 0.59
CLCN4-201ENST00000380829 HDGFL2Q7Z4V5 671 aaPredicted RBP18.74■□□□□ 0.59
CLCN4-201ENST00000380829 GOLGA2Q08379 1002 aa18.73■□□□□ 0.59
CLCN4-201ENST00000380829 C3P01024 1663 aa18.73■□□□□ 0.59
CLCN4-201ENST00000380829 NLRP1Q9C000 1473 aa18.73■□□□□ 0.59
CLCN4-201ENST00000380829 FYB1O15117 783 aa18.73■□□□□ 0.59
CLCN4-201ENST00000380829 RTL5Q5HYW3 569 aaPredicted RBP18.73■□□□□ 0.59
CLCN4-201ENST00000380829 DUSP27Q5VZP5 1158 aa18.72■□□□□ 0.59
CLCN4-201ENST00000380829 CFAP53Q96M91 514 aa18.72■□□□□ 0.59
CLCN4-201ENST00000380829 FER1L4A9Z1Z3 1794 aa18.71■□□□□ 0.59
CLCN4-201ENST00000380829 ADAMTS13Q76LX8 1427 aa18.71■□□□□ 0.59
CLCN4-201ENST00000380829 WASLO00401 505 aaPredicted RBP18.71■□□□□ 0.59
CLCN4-201ENST00000380829 PLIN1O60240 522 aa18.69■□□□□ 0.58
CLCN4-201ENST00000380829 SPINK5Q9NQ38 1064 aaPredicted RBP18.69■□□□□ 0.58
CLCN4-201ENST00000380829 TECPR2O15040 1411 aa18.69■□□□□ 0.58
CLCN4-201ENST00000380829 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.69■□□□□ 0.58
CLCN4-201ENST00000380829 FAM135BQ49AJ0 1406 aa18.68■□□□□ 0.58
CLCN4-201ENST00000380829 KNDC1Q76NI1 1749 aa18.68■□□□□ 0.58
CLCN4-201ENST00000380829 PLEKHG1Q9ULL1 1385 aa18.68■□□□□ 0.58
CLCN4-201ENST00000380829 SLFN5Q08AF3 891 aa18.68■□□□□ 0.58
CLCN4-201ENST00000380829 SLC26A8Q96RN1 970 aa18.68■□□□□ 0.58
CLCN4-201ENST00000380829 NCKAP5LQ9HCH0 1330 aa18.67■□□□□ 0.58
CLCN4-201ENST00000380829 ROBO2Q9HCK4 1378 aa18.67■□□□□ 0.58
CLCN4-201ENST00000380829 EXOC6Q8TAG9 804 aa18.67■□□□□ 0.58
CLCN4-201ENST00000380829 DMRT2Q9Y5R5 561 aa18.67■□□□□ 0.58
CLCN4-201ENST00000380829 CPS1P31327 1500 aa18.67■□□□□ 0.58
CLCN4-201ENST00000380829 NEUROD2Q15784 382 aa18.66■□□□□ 0.58
CLCN4-201ENST00000380829 RRP7AQ9Y3A4 280 aaKnown RBP18.66■□□□□ 0.58
CLCN4-201ENST00000380829 PPIP5K1Q6PFW1 1433 aa18.66■□□□□ 0.58
CLCN4-201ENST00000380829 ATP7BP35670 1465 aa18.66■□□□□ 0.58
CLCN4-201ENST00000380829 RUNDC1Q96C34 613 aa18.66■□□□□ 0.58
CLCN4-201ENST00000380829 EID1Q9Y6B2 187 aa18.66■□□□□ 0.58
CLCN4-201ENST00000380829 ANKRD26Q9UPS8 1709 aa18.65■□□□□ 0.58
CLCN4-201ENST00000380829 MED14O60244 1454 aa18.65■□□□□ 0.58
CLCN4-201ENST00000380829 SIRT1Q96EB6 747 aa18.65■□□□□ 0.58
CLCN4-201ENST00000380829 U2AF1L5P0DN76 240 aaPredicted RBP18.64■□□□□ 0.58
CLCN4-201ENST00000380829 U2AF1Q01081 240 aaKnown RBP eCLIP18.64■□□□□ 0.58
CLCN4-201ENST00000380829 NUDT16Q96DE0 195 aaKnown RBP18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms