RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 EIF3AQ14152 1382 aaKnown RBP17.9■□□□□ 0.46
SMN1-202ENST00000380707 USP47Q96K76 1375 aa17.9■□□□□ 0.46
SMN1-202ENST00000380707 CENPJQ9HC77 1338 aaPredicted RBP17.9■□□□□ 0.46
SMN1-202ENST00000380707 ADGRL3Q9HAR2 1447 aa17.89■□□□□ 0.45
SMN1-202ENST00000380707 ST20-MTHFSA0A0A6YYL1 179 aa17.88■□□□□ 0.45
SMN1-202ENST00000380707 HIRIP3Q9BW71 556 aaPredicted RBP17.88■□□□□ 0.45
SMN1-202ENST00000380707 C19orf44Q9H6X5 657 aa17.88■□□□□ 0.45
SMN1-202ENST00000380707 NALCNQ8IZF0 1738 aa17.88■□□□□ 0.45
SMN1-202ENST00000380707 MINK1Q8N4C8 1332 aaPredicted RBP17.88■□□□□ 0.45
SMN1-202ENST00000380707 MSH6P52701 1360 aa17.86■□□□□ 0.45
SMN1-202ENST00000380707 EIF4G2P78344 907 aaKnown RBP eCLIP17.85■□□□□ 0.45
SMN1-202ENST00000380707 QRICH2Q9H0J4 1663 aa17.84■□□□□ 0.45
SMN1-202ENST00000380707 HSPA5P11021 654 aaKnown RBP17.84■□□□□ 0.45
SMN1-202ENST00000380707 IQSEC2Q5JU85 1478 aa17.84■□□□□ 0.45
SMN1-202ENST00000380707 TESK2Q96S53 571 aa17.83■□□□□ 0.45
SMN1-202ENST00000380707 ATF3P18847 181 aa17.82■□□□□ 0.44
SMN1-202ENST00000380707 DCCP43146 1447 aa17.82■□□□□ 0.44
SMN1-202ENST00000380707 ADGRB2O60241 1585 aa17.81■□□□□ 0.44
SMN1-202ENST00000380707 WASLO00401 505 aaPredicted RBP17.81■□□□□ 0.44
SMN1-202ENST00000380707 CADPS2Q86UW7 1296 aa17.81■□□□□ 0.44
SMN1-202ENST00000380707 SBNO2Q9Y2G9 1366 aa17.81■□□□□ 0.44
SMN1-202ENST00000380707 CDC42BPGQ6DT37 1551 aa17.81■□□□□ 0.44
SMN1-202ENST00000380707 CDK19Q9BWU1 502 aa17.79■□□□□ 0.44
SMN1-202ENST00000380707 NUTM2FA1L443 756 aa17.78■□□□□ 0.44
SMN1-202ENST00000380707 SLAIN2Q9P270 581 aa17.78■□□□□ 0.44
SMN1-202ENST00000380707 TULP4Q9NRJ4 1543 aa17.78■□□□□ 0.44
SMN1-202ENST00000380707 UBAP1LF5GYI3 381 aa17.77■□□□□ 0.44
SMN1-202ENST00000380707 EVC2Q86UK5 1308 aa17.77■□□□□ 0.44
SMN1-202ENST00000380707 TOM1O60784 492 aa17.77■□□□□ 0.43
SMN1-202ENST00000380707 MST1RQ04912 1400 aa17.77■□□□□ 0.43
SMN1-202ENST00000380707 CABP2Q9NPB3 220 aa17.76■□□□□ 0.43
SMN1-202ENST00000380707 FMN2Q9NZ56 1722 aa17.75■□□□□ 0.43
SMN1-202ENST00000380707 SRPK2P78362 688 aaKnown RBP17.75■□□□□ 0.43
SMN1-202ENST00000380707 DISP3Q9P2K9 1392 aa17.75■□□□□ 0.43
SMN1-202ENST00000380707 C1orf167Q5SNV9 1468 aa17.74■□□□□ 0.43
SMN1-202ENST00000380707 SLC24A1O60721 1099 aa17.74■□□□□ 0.43
SMN1-202ENST00000380707 PRR36Q9H6K5 1346 aa17.74■□□□□ 0.43
SMN1-202ENST00000380707 TMF1P82094 1093 aa17.73■□□□□ 0.43
SMN1-202ENST00000380707 USP32Q8NFA0 1604 aa17.72■□□□□ 0.43
SMN1-202ENST00000380707 NUDT16Q96DE0 195 aaKnown RBP17.72■□□□□ 0.43
SMN1-202ENST00000380707 PIP4K2BP78356 416 aa17.72■□□□□ 0.43
SMN1-202ENST00000380707 ORAI2Q96SN7 254 aa17.72■□□□□ 0.43
SMN1-202ENST00000380707 ATP7BP35670 1465 aa17.71■□□□□ 0.43
SMN1-202ENST00000380707 C11orf95C9JLR9 678 aaPredicted RBP17.71■□□□□ 0.43
SMN1-202ENST00000380707 ANKARQ7Z5J8 1434 aa17.71■□□□□ 0.43
SMN1-202ENST00000380707 ESCO1Q5FWF5 840 aa17.7■□□□□ 0.42
SMN1-202ENST00000380707 RGPD8O14715 1765 aaPredicted RBP17.7■□□□□ 0.42
SMN1-202ENST00000380707 BRINP3Q76B58 766 aa17.69■□□□□ 0.42
SMN1-202ENST00000380707 SCAF1Q9H7N4 1312 aaKnown RBP17.68■□□□□ 0.42
SMN1-202ENST00000380707 CCDC61Q9Y6R9 512 aa17.68■□□□□ 0.42
SMN1-202ENST00000380707 PUS7Q96PZ0 661 aaKnown RBP17.67■□□□□ 0.42
SMN1-202ENST00000380707 CDCA8Q53HL2 280 aa17.67■□□□□ 0.42
SMN1-202ENST00000380707 PMFBP1Q8TBY8 1022 aa17.67■□□□□ 0.42
SMN1-202ENST00000380707 ATAD2Q6PL18 1390 aa17.66■□□□□ 0.42
SMN1-202ENST00000380707 ROBO1Q9Y6N7 1651 aa17.66■□□□□ 0.42
SMN1-202ENST00000380707 CABP1Q9NZU7 370 aa17.66■□□□□ 0.42
SMN1-202ENST00000380707 PHF8Q9UPP1 1060 aa17.66■□□□□ 0.42
SMN1-202ENST00000380707 TOPAZ1Q8N9V7 1692 aa17.65■□□□□ 0.42
SMN1-202ENST00000380707 PPIP5K1Q6PFW1 1433 aa17.65■□□□□ 0.42
SMN1-202ENST00000380707 PLEKHG3A1L390 1219 aa17.64■□□□□ 0.41
SMN1-202ENST00000380707 DDX17Q92841 729 aaKnown RBP17.64■□□□□ 0.41
SMN1-202ENST00000380707 KIF7Q2M1P5 1343 aa17.64■□□□□ 0.41
SMN1-202ENST00000380707 POLR3GLQ9BT43 218 aa17.63■□□□□ 0.41
SMN1-202ENST00000380707 FOXO3O43524 673 aa17.62■□□□□ 0.41
SMN1-202ENST00000380707 ITSN1Q15811 1721 aa17.62■□□□□ 0.41
SMN1-202ENST00000380707 TMC1Q8TDI8 760 aa17.62■□□□□ 0.41
SMN1-202ENST00000380707 FBXO41Q8TF61 875 aa17.62■□□□□ 0.41
SMN1-202ENST00000380707 SLC12A5Q9H2X9 1139 aa17.62■□□□□ 0.41
SMN1-202ENST00000380707 ACEP12821 1306 aa17.61■□□□□ 0.41
SMN1-202ENST00000380707 WASHC2AQ641Q2 1341 aa17.61■□□□□ 0.41
SMN1-202ENST00000380707 NGDNQ8NEJ9 315 aaKnown RBP17.61■□□□□ 0.41
SMN1-202ENST00000380707 POLR3AO14802 1390 aaPredicted RBP17.6■□□□□ 0.41
SMN1-202ENST00000380707 KIF1AQ12756 1690 aa17.6■□□□□ 0.41
SMN1-202ENST00000380707 XPCQ01831 940 aaPredicted RBP17.59■□□□□ 0.41
SMN1-202ENST00000380707 CCDC7Q96M83 1385 aa17.59■□□□□ 0.41
SMN1-202ENST00000380707 NPHP3Q7Z494 1330 aa17.58■□□□□ 0.4
SMN1-202ENST00000380707 CD163L1Q9NR16 1453 aa17.58■□□□□ 0.4
SMN1-202ENST00000380707 NINLQ9Y2I6 1382 aa17.58■□□□□ 0.4
SMN1-202ENST00000380707 PSME1Q06323 249 aa17.57■□□□□ 0.4
SMN1-202ENST00000380707 NHSL1Q5SYE7 1610 aa17.57■□□□□ 0.4
SMN1-202ENST00000380707 MYOM1P52179 1685 aa17.56■□□□□ 0.4
SMN1-202ENST00000380707 AHDC1Q5TGY3 1603 aaPredicted RBP17.56■□□□□ 0.4
SMN1-202ENST00000380707 HSPA1LP34931 641 aa17.56■□□□□ 0.4
SMN1-202ENST00000380707 KRT28Q7Z3Y7 464 aa17.56■□□□□ 0.4
SMN1-202ENST00000380707 CPSF1Q10570 1443 aaKnown RBP17.56■□□□□ 0.4
SMN1-202ENST00000380707 SOS2Q07890 1332 aaPredicted RBP17.55■□□□□ 0.4
SMN1-202ENST00000380707 PXDNQ92626 1479 aa17.55■□□□□ 0.4
SMN1-202ENST00000380707 A0A1W2PP64 1363 aa17.54■□□□□ 0.4
SMN1-202ENST00000380707 ZNF692Q9BU19 519 aaPredicted RBP17.54■□□□□ 0.4
SMN1-202ENST00000380707 TERF2IPQ9NYB0 399 aa17.54■□□□□ 0.4
SMN1-202ENST00000380707 HDGFL2Q7Z4V5 671 aaPredicted RBP17.53■□□□□ 0.4
SMN1-202ENST00000380707 PHLPP1O60346 1717 aa17.53■□□□□ 0.4
SMN1-202ENST00000380707 ANKRD36BQ8N2N9 1353 aa17.53■□□□□ 0.4
SMN1-202ENST00000380707 KTN1Q86UP2 1357 aaKnown RBP17.52■□□□□ 0.4
SMN1-202ENST00000380707 USP6P35125 1406 aa17.52■□□□□ 0.4
SMN1-202ENST00000380707 ZNF316A6NFI3 1004 aaPredicted RBP17.52■□□□□ 0.39
SMN1-202ENST00000380707 AKAP12Q02952 1782 aa17.51■□□□□ 0.39
SMN1-202ENST00000380707 COL16A1Q07092 1604 aaPredicted RBP17.51■□□□□ 0.39
SMN1-202ENST00000380707 PANK3Q9H999 370 aa17.51■□□□□ 0.39
SMN1-202ENST00000380707 PAK3O75914 559 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms