RNA–Protein interactions for RNA: ENST00000380691.2

MSL3-204, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-204ENST00000380691 DEFB132Q7Z7B7 95 aa9.29□□□□□ -0.92
MSL3-204ENST00000380691 ADAMTS13Q76LX8 1427 aa9.29□□□□□ -0.92
MSL3-204ENST00000380691 BCL9LQ86UU0 1499 aa9.28□□□□□ -0.92
MSL3-204ENST00000380691 KIF15Q9NS87 1388 aa9.28□□□□□ -0.92
MSL3-204ENST00000380691 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.27□□□□□ -0.93
MSL3-204ENST00000380691 AKT1S1Q96B36 256 aa9.27□□□□□ -0.93
MSL3-204ENST00000380691 EP400Q96L91 3159 aa9.27□□□□□ -0.93
MSL3-204ENST00000380691 UNC13BO14795 1591 aa9.26□□□□□ -0.93
MSL3-204ENST00000380691 PSDA5PKW4 1024 aaPredicted RBP9.26□□□□□ -0.93
MSL3-204ENST00000380691 GJD4Q96KN9 370 aaPredicted RBP9.26□□□□□ -0.93
MSL3-204ENST00000380691 CHD2O14647 1828 aaKnown RBP9.26□□□□□ -0.93
MSL3-204ENST00000380691 MKRN4PQ13434 485 aaPredicted RBP9.25□□□□□ -0.93
MSL3-204ENST00000380691 DDX17Q92841 729 aaKnown RBP9.25□□□□□ -0.93
MSL3-204ENST00000380691 TPRNQ4KMQ1 711 aa9.24□□□□□ -0.93
MSL3-204ENST00000380691 AMOTL2Q9Y2J4 779 aa9.24□□□□□ -0.93
MSL3-204ENST00000380691 TRPM2O94759 1503 aa9.24□□□□□ -0.93
MSL3-204ENST00000380691 ADGRL3Q9HAR2 1447 aa9.23□□□□□ -0.93
MSL3-204ENST00000380691 MYOM2P54296 1465 aa9.23□□□□□ -0.93
MSL3-204ENST00000380691 SOS2Q07890 1332 aaPredicted RBP9.23□□□□□ -0.93
MSL3-204ENST00000380691 MYOM3Q5VTT5 1437 aa9.22□□□□□ -0.93
MSL3-204ENST00000380691 PTPRUQ92729 1446 aa9.22□□□□□ -0.93
MSL3-204ENST00000380691 RPRD2Q5VT52 1461 aaKnown RBP9.22□□□□□ -0.93
MSL3-204ENST00000380691 BAG6P46379 1132 aa9.22□□□□□ -0.93
MSL3-204ENST00000380691 RALGAPBQ86X10 1494 aa9.21□□□□□ -0.93
MSL3-204ENST00000380691 SPDYE2BA6NHP3 402 aa9.21□□□□□ -0.94
MSL3-204ENST00000380691 SPDYE6P0CI01 402 aa9.21□□□□□ -0.94
MSL3-204ENST00000380691 SPDYE2Q495Y8 402 aa9.21□□□□□ -0.94
MSL3-204ENST00000380691 C1orf167Q5SNV9 1468 aa9.21□□□□□ -0.94
MSL3-204ENST00000380691 VSIG10Q8N0Z9 540 aa9.2□□□□□ -0.94
MSL3-204ENST00000380691 RRP7BPQ9NSQ0 103 aa9.2□□□□□ -0.94
MSL3-204ENST00000380691 SENP3-EIF4A1A0A087X0R7 540 aa9.19□□□□□ -0.94
MSL3-204ENST00000380691 LAMC1P11047 1609 aa9.19□□□□□ -0.94
MSL3-204ENST00000380691 HAX1O00165 279 aa9.18□□□□□ -0.94
MSL3-204ENST00000380691 R3HDM1Q15032 1099 aaKnown RBP9.18□□□□□ -0.94
MSL3-204ENST00000380691 SPHKAPQ2M3C7 1700 aa9.18□□□□□ -0.94
MSL3-204ENST00000380691 UNC5CLQ8IV45 518 aa9.18□□□□□ -0.94
MSL3-204ENST00000380691 REM2Q8IYK8 340 aaPredicted RBP9.18□□□□□ -0.94
MSL3-204ENST00000380691 SEPT12Q8IYM1 358 aa9.18□□□□□ -0.94
MSL3-204ENST00000380691 COL22A1Q8NFW1 1626 aaPredicted RBP9.18□□□□□ -0.94
MSL3-204ENST00000380691 XRN1Q8IZH2 1706 aaKnown RBP9.17□□□□□ -0.94
MSL3-204ENST00000380691 TMEM131LA2VDJ0 1609 aa9.17□□□□□ -0.94
MSL3-204ENST00000380691 GLI3P10071 1580 aa9.17□□□□□ -0.94
MSL3-204ENST00000380691 ZNF692Q9BU19 519 aaPredicted RBP9.17□□□□□ -0.94
MSL3-204ENST00000380691 CFAP65Q6ZU64 1925 aaKnown RBP9.17□□□□□ -0.94
MSL3-204ENST00000380691 SLIT2O94813 1529 aa9.16□□□□□ -0.94
MSL3-204ENST00000380691 CHGAP10645 457 aaKnown RBP9.16□□□□□ -0.94
MSL3-204ENST00000380691 ERICH6Q7L0X2 663 aa9.16□□□□□ -0.94
MSL3-204ENST00000380691 KRT27Q7Z3Y8 459 aa9.16□□□□□ -0.94
MSL3-204ENST00000380691 DISP2A7MBM2 1401 aa9.15□□□□□ -0.94
MSL3-204ENST00000380691 ABCC5O15440 1437 aa9.15□□□□□ -0.94
MSL3-204ENST00000380691 PIP4P2Q8N4L2 257 aa9.15□□□□□ -0.94
MSL3-204ENST00000380691 ANKRD30AQ9BXX3 1397 aa9.14□□□□□ -0.95
MSL3-204ENST00000380691 NINLQ9Y2I6 1382 aa9.14□□□□□ -0.95
MSL3-204ENST00000380691 NPHP3Q7Z494 1330 aa9.14□□□□□ -0.95
MSL3-204ENST00000380691 ORAI2Q96SN7 254 aa9.14□□□□□ -0.95
MSL3-204ENST00000380691 TIMELESSQ9UNS1 1208 aa9.14□□□□□ -0.95
MSL3-204ENST00000380691 ONECUT3O60422 494 aaPredicted RBP9.13□□□□□ -0.95
MSL3-204ENST00000380691 EN1Q05925 392 aaPredicted RBP9.13□□□□□ -0.95
MSL3-204ENST00000380691 VPS72Q15906 364 aa9.13□□□□□ -0.95
MSL3-204ENST00000380691 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.13□□□□□ -0.95
MSL3-204ENST00000380691 GCC2Q8IWJ2 1684 aa9.13□□□□□ -0.95
MSL3-204ENST00000380691 PTPN23Q9H3S7 1636 aa9.13□□□□□ -0.95
MSL3-204ENST00000380691 METP08581 1390 aa9.12□□□□□ -0.95
MSL3-204ENST00000380691 ZNF784Q8NCA9 323 aaPredicted RBP9.12□□□□□ -0.95
MSL3-204ENST00000380691 PXDNQ92626 1479 aa9.12□□□□□ -0.95
MSL3-204ENST00000380691 DAPK1P53355 1430 aa9.12□□□□□ -0.95
MSL3-204ENST00000380691 ADGRL2O95490 1459 aa9.11□□□□□ -0.95
MSL3-204ENST00000380691 TULP1O00294 542 aaPredicted RBP9.11□□□□□ -0.95
MSL3-204ENST00000380691 C1QTNF8P60827 252 aa9.11□□□□□ -0.95
MSL3-204ENST00000380691 PPP1R1BQ9UD71 204 aaPredicted RBP9.1□□□□□ -0.95
MSL3-204ENST00000380691 PARD3Q8TEW0 1356 aa9.1□□□□□ -0.95
MSL3-204ENST00000380691 NALCNQ8IZF0 1738 aa9.09□□□□□ -0.95
MSL3-204ENST00000380691 A0A0G2JS52 829 aa9.09□□□□□ -0.95
MSL3-204ENST00000380691 MYT1Q01538 1121 aa9.09□□□□□ -0.95
MSL3-204ENST00000380691 LRPPRCP42704 1394 aaKnown RBP9.09□□□□□ -0.95
MSL3-204ENST00000380691 NRXN3Q9Y4C0 1643 aa9.09□□□□□ -0.95
MSL3-204ENST00000380691 PRAG1Q86YV5 1406 aa9.08□□□□□ -0.96
MSL3-204ENST00000380691 CROCC2H7BZ55 1655 aa9.08□□□□□ -0.96
MSL3-204ENST00000380691 PITPNM1O00562 1244 aa9.08□□□□□ -0.96
MSL3-204ENST00000380691 CCDC9Q9Y3X0 531 aaKnown RBP9.08□□□□□ -0.96
MSL3-204ENST00000380691 ADGRB2O60241 1585 aa9.07□□□□□ -0.96
MSL3-204ENST00000380691 EZH2Q15910 746 aaKnown RBP9.07□□□□□ -0.96
MSL3-204ENST00000380691 SPON1Q9HCB6 807 aa9.07□□□□□ -0.96
MSL3-204ENST00000380691 ANKRD50Q9ULJ7 1429 aa9.06□□□□□ -0.96
MSL3-204ENST00000380691 XPCQ01831 940 aaPredicted RBP9.06□□□□□ -0.96
MSL3-204ENST00000380691 ESCO1Q5FWF5 840 aa9.06□□□□□ -0.96
MSL3-204ENST00000380691 HOMEZQ8IX15 550 aa9.06□□□□□ -0.96
MSL3-204ENST00000380691 CAMKK2Q96RR4 588 aa9.06□□□□□ -0.96
MSL3-204ENST00000380691 CHIC2Q9UKJ5 165 aa9.06□□□□□ -0.96
MSL3-204ENST00000380691 CLEC11AQ9Y240 323 aa9.06□□□□□ -0.96
MSL3-204ENST00000380691 ROBO2Q9HCK4 1378 aa9.06□□□□□ -0.96
MSL3-204ENST00000380691 USP32Q8NFA0 1604 aa9.05□□□□□ -0.96
MSL3-204ENST00000380691 FOXO3O43524 673 aa9.05□□□□□ -0.96
MSL3-204ENST00000380691 SSUH2Q9Y2M2 353 aa9.05□□□□□ -0.96
MSL3-204ENST00000380691 MYO5BQ9ULV0 1848 aa9.05□□□□□ -0.96
MSL3-204ENST00000380691 HFM1A2PYH4 1435 aa9.05□□□□□ -0.96
MSL3-204ENST00000380691 SPATA31A3Q5VYP0 1347 aa9.05□□□□□ -0.96
MSL3-204ENST00000380691 SPDYE4A6NLX3 237 aa9.04□□□□□ -0.96
MSL3-204ENST00000380691 FAM98CQ17RN3 349 aaKnown RBP9.04□□□□□ -0.96
MSL3-204ENST00000380691 NBPF8Q3BBV2 869 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms