RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 CCDC136Q96JN2 1154 aa16.67■□□□□ 0.26
VPS16-202ENST00000380445 CGNL1Q0VF96 1302 aa16.67■□□□□ 0.26
VPS16-202ENST00000380445 CLTCQ00610 1675 aaKnown RBP16.67■□□□□ 0.26
VPS16-202ENST00000380445 POLR3AO14802 1390 aaPredicted RBP16.67■□□□□ 0.26
VPS16-202ENST00000380445 ARHGEF40Q8TER5 1519 aa16.66■□□□□ 0.26
VPS16-202ENST00000380445 ANKRD36BQ8N2N9 1353 aa16.66■□□□□ 0.26
VPS16-202ENST00000380445 TULP4Q9NRJ4 1543 aa16.66■□□□□ 0.26
VPS16-202ENST00000380445 SPATA31D1Q6ZQQ2 1576 aa16.66■□□□□ 0.26
VPS16-202ENST00000380445 NSD2O96028 1365 aa16.65■□□□□ 0.26
VPS16-202ENST00000380445 ESF1Q9H501 851 aaKnown RBP16.65■□□□□ 0.26
VPS16-202ENST00000380445 YTHDC2Q9H6S0 1430 aaKnown RBP16.64■□□□□ 0.25
VPS16-202ENST00000380445 STK26Q9P289 416 aa16.64■□□□□ 0.25
VPS16-202ENST00000380445 GOLGA2Q08379 1002 aa16.63■□□□□ 0.25
VPS16-202ENST00000380445 ZNF521Q96K83 1311 aa16.63■□□□□ 0.25
VPS16-202ENST00000380445 POGKQ9P215 609 aa16.62■□□□□ 0.25
VPS16-202ENST00000380445 ALKQ9UM73 1620 aa16.62■□□□□ 0.25
VPS16-202ENST00000380445 ATAD2Q6PL18 1390 aa16.62■□□□□ 0.25
VPS16-202ENST00000380445 PLEKHH1Q9ULM0 1364 aa16.62■□□□□ 0.25
VPS16-202ENST00000380445 PTPRMP28827 1452 aa16.62■□□□□ 0.25
VPS16-202ENST00000380445 MLECQ14165 292 aa16.61■□□□□ 0.25
VPS16-202ENST00000380445 A2ML1A8K2U0 1454 aa16.61■□□□□ 0.25
VPS16-202ENST00000380445 SRPK2P78362 688 aaKnown RBP16.61■□□□□ 0.25
VPS16-202ENST00000380445 CABP2Q9NPB3 220 aa16.61■□□□□ 0.25
VPS16-202ENST00000380445 SAFB2Q14151 953 aaKnown RBP eCLIP16.6■□□□□ 0.25
VPS16-202ENST00000380445 PRAM1Q96QH2 718 aa16.6■□□□□ 0.25
VPS16-202ENST00000380445 CFAP53Q96M91 514 aa16.6■□□□□ 0.25
VPS16-202ENST00000380445 RIMS2Q9UQ26 1411 aa16.59■□□□□ 0.25
VPS16-202ENST00000380445 DUSP27Q5VZP5 1158 aa16.59■□□□□ 0.25
VPS16-202ENST00000380445 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.59■□□□□ 0.25
VPS16-202ENST00000380445 CCDC146Q8IYE0 955 aa16.58■□□□□ 0.25
VPS16-202ENST00000380445 TERF2IPQ9NYB0 399 aa16.58■□□□□ 0.25
VPS16-202ENST00000380445 APAF1O14727 1248 aa16.58■□□□□ 0.24
VPS16-202ENST00000380445 HDGFP51858 240 aaKnown RBP16.57■□□□□ 0.24
VPS16-202ENST00000380445 ZMYM3Q14202 1370 aa16.57■□□□□ 0.24
VPS16-202ENST00000380445 SLFN5Q08AF3 891 aa16.56■□□□□ 0.24
VPS16-202ENST00000380445 DLC1Q96QB1 1528 aa16.56■□□□□ 0.24
VPS16-202ENST00000380445 MINK1Q8N4C8 1332 aaPredicted RBP16.56■□□□□ 0.24
VPS16-202ENST00000380445 ABCC11Q96J66 1382 aa16.56■□□□□ 0.24
VPS16-202ENST00000380445 EXOC6Q8TAG9 804 aa16.55■□□□□ 0.24
VPS16-202ENST00000380445 TNNT2P45379 298 aaPredicted RBP16.55■□□□□ 0.24
VPS16-202ENST00000380445 E9PSI1 815 aa16.55■□□□□ 0.24
VPS16-202ENST00000380445 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.55■□□□□ 0.24
VPS16-202ENST00000380445 SENP3Q9H4L4 574 aaPredicted RBP16.55■□□□□ 0.24
VPS16-202ENST00000380445 A0A1W2PP64 1363 aa16.54■□□□□ 0.24
VPS16-202ENST00000380445 MTHFSP49914 203 aa16.54■□□□□ 0.24
VPS16-202ENST00000380445 TRMT2AQ8IZ69 625 aaKnown RBP16.54■□□□□ 0.24
VPS16-202ENST00000380445 HDGFL2Q7Z4V5 671 aaPredicted RBP16.53■□□□□ 0.24
VPS16-202ENST00000380445 RUNDC1Q96C34 613 aa16.53■□□□□ 0.24
VPS16-202ENST00000380445 ANO8Q9HCE9 1232 aaPredicted RBP16.53■□□□□ 0.24
VPS16-202ENST00000380445 SHPRHQ149N8 1683 aa16.53■□□□□ 0.24
VPS16-202ENST00000380445 FANCIQ9NVI1 1328 aa16.52■□□□□ 0.24
VPS16-202ENST00000380445 CDK19Q9BWU1 502 aa16.52■□□□□ 0.23
VPS16-202ENST00000380445 MED14O60244 1454 aa16.51■□□□□ 0.23
VPS16-202ENST00000380445 NKTRP30414 1462 aaKnown RBP16.51■□□□□ 0.23
VPS16-202ENST00000380445 NCBP3Q53F19 620 aaKnown RBP16.5■□□□□ 0.23
VPS16-202ENST00000380445 TNRQ92752 1358 aa16.5■□□□□ 0.23
VPS16-202ENST00000380445 PLIN1O60240 522 aa16.49■□□□□ 0.23
VPS16-202ENST00000380445 SETD1AO15047 1707 aaKnown RBP16.49■□□□□ 0.23
VPS16-202ENST00000380445 WWC1Q8IX03 1113 aa16.48■□□□□ 0.23
VPS16-202ENST00000380445 CD163L1Q9NR16 1453 aa16.47■□□□□ 0.23
VPS16-202ENST00000380445 MSH5O43196 834 aa16.47■□□□□ 0.23
VPS16-202ENST00000380445 ANKRD26Q9UPS8 1709 aa16.47■□□□□ 0.23
VPS16-202ENST00000380445 SIRT1Q96EB6 747 aa16.47■□□□□ 0.23
VPS16-202ENST00000380445 FYB1O15117 783 aa16.46■□□□□ 0.23
VPS16-202ENST00000380445 CRBNQ96SW2 442 aa16.46■□□□□ 0.23
VPS16-202ENST00000380445 CABP1Q9NZU7 370 aa16.46■□□□□ 0.23
VPS16-202ENST00000380445 CCDC27Q2M243 656 aa16.45■□□□□ 0.22
VPS16-202ENST00000380445 TCP11L2Q8N4U5 519 aa16.45■□□□□ 0.22
VPS16-202ENST00000380445 GGNBP2Q9H3C7 697 aa16.45■□□□□ 0.22
VPS16-202ENST00000380445 ATP7BP35670 1465 aa16.45■□□□□ 0.22
VPS16-202ENST00000380445 NRXN3Q9Y4C0 1643 aa16.45■□□□□ 0.22
VPS16-202ENST00000380445 WAPLQ7Z5K2 1190 aa16.45■□□□□ 0.22
VPS16-202ENST00000380445 WDR63Q8IWG1 891 aa16.44■□□□□ 0.22
VPS16-202ENST00000380445 SPINK5Q9NQ38 1064 aaPredicted RBP16.44■□□□□ 0.22
VPS16-202ENST00000380445 IQSEC2Q5JU85 1478 aa16.44■□□□□ 0.22
VPS16-202ENST00000380445 FAM135BQ49AJ0 1406 aa16.44■□□□□ 0.22
VPS16-202ENST00000380445 U2AF1L5P0DN76 240 aaPredicted RBP16.43■□□□□ 0.22
VPS16-202ENST00000380445 U2AF1Q01081 240 aaKnown RBP eCLIP16.43■□□□□ 0.22
VPS16-202ENST00000380445 TMEM2Q9UHN6 1383 aa16.43■□□□□ 0.22
VPS16-202ENST00000380445 PHF23Q9BUL5 403 aaPredicted RBP16.43■□□□□ 0.22
VPS16-202ENST00000380445 NLRP1Q9C000 1473 aa16.42■□□□□ 0.22
VPS16-202ENST00000380445 METP08581 1390 aa16.42■□□□□ 0.22
VPS16-202ENST00000380445 KNDC1Q76NI1 1749 aa16.42■□□□□ 0.22
VPS16-202ENST00000380445 TECPR2O15040 1411 aa16.42■□□□□ 0.22
VPS16-202ENST00000380445 WASLO00401 505 aaPredicted RBP16.42■□□□□ 0.22
VPS16-202ENST00000380445 TCERG1O14776 1098 aaKnown RBP16.42■□□□□ 0.22
VPS16-202ENST00000380445 UBR1Q8IWV7 1749 aa16.41■□□□□ 0.22
VPS16-202ENST00000380445 NEUROD2Q15784 382 aa16.41■□□□□ 0.22
VPS16-202ENST00000380445 PNNQ9H307 717 aaKnown RBP16.41■□□□□ 0.22
VPS16-202ENST00000380445 C20orf194Q5TEA3 1177 aa16.4■□□□□ 0.22
VPS16-202ENST00000380445 KIF20BQ96Q89 1820 aa16.4■□□□□ 0.22
VPS16-202ENST00000380445 DMRT2Q9Y5R5 561 aa16.39■□□□□ 0.21
VPS16-202ENST00000380445 TXNDC2Q86VQ3 553 aa16.38■□□□□ 0.21
VPS16-202ENST00000380445 RRP7AQ9Y3A4 280 aaKnown RBP16.38■□□□□ 0.21
VPS16-202ENST00000380445 CPS1P31327 1500 aa16.38■□□□□ 0.21
VPS16-202ENST00000380445 MYH16Q9H6N6 1097 aa16.38■□□□□ 0.21
VPS16-202ENST00000380445 COL3A1P02461 1466 aaPredicted RBP16.37■□□□□ 0.21
VPS16-202ENST00000380445 ADGRB2O60241 1585 aa16.37■□□□□ 0.21
VPS16-202ENST00000380445 U2SURPO15042 1029 aaKnown RBP16.37■□□□□ 0.21
VPS16-202ENST00000380445 EDC4Q6P2E9 1401 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms