RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 CARD14Q9BXL6 1004 aa15.18■□□□□ 0.02
HERC6-203ENST00000380265 U2SURPO15042 1029 aaKnown RBP15.17■□□□□ 0.02
HERC6-203ENST00000380265 SHANK2Q9UPX8 1470 aa15.17■□□□□ 0.02
HERC6-203ENST00000380265 CHGAP10645 457 aaKnown RBP15.16■□□□□ 0.02
HERC6-203ENST00000380265 RSPH4AQ5TD94 716 aa15.16■□□□□ 0.02
HERC6-203ENST00000380265 MAGI1Q96QZ7 1491 aaPredicted RBP15.16■□□□□ 0.02
HERC6-203ENST00000380265 PTMSP20962 102 aa15.16■□□□□ 0.02
HERC6-203ENST00000380265 CFAP70Q5T0N1 1121 aa15.16■□□□□ 0.02
HERC6-203ENST00000380265 DDX19BQ9UMR2 479 aa15.16■□□□□ 0.02
HERC6-203ENST00000380265 MTHFSP49914 203 aa15.15■□□□□ 0.02
HERC6-203ENST00000380265 CALD1Q05682 793 aaKnown RBP15.15■□□□□ 0.02
HERC6-203ENST00000380265 EXOSC9Q06265 439 aaKnown RBP15.15■□□□□ 0.02
HERC6-203ENST00000380265 CAVIN1Q6NZI2 390 aaKnown RBP15.15■□□□□ 0.02
HERC6-203ENST00000380265 ZNF692Q9BU19 519 aaPredicted RBP15.15■□□□□ 0.02
HERC6-203ENST00000380265 MCTP1Q6DN14 999 aa15.15■□□□□ 0.02
HERC6-203ENST00000380265 RBM42Q9BTD8 480 aaKnown RBP15.15■□□□□ 0.02
HERC6-203ENST00000380265 CIZ1Q9ULV3 898 aaPredicted RBP15.15■□□□□ 0.02
HERC6-203ENST00000380265 CROCC2H7BZ55 1655 aa15.15■□□□□ 0.02
HERC6-203ENST00000380265 ANKRD45Q5TZF3 282 aa15.14■□□□□ 0.01
HERC6-203ENST00000380265 WDR63Q8IWG1 891 aa15.14■□□□□ 0.01
HERC6-203ENST00000380265 CCDC141Q6ZP82 1450 aa15.14■□□□□ 0.01
HERC6-203ENST00000380265 XPCQ01831 940 aaPredicted RBP15.14■□□□□ 0.01
HERC6-203ENST00000380265 RAB3GAP1Q15042 981 aa15.14■□□□□ 0.01
HERC6-203ENST00000380265 PBRM1Q86U86 1689 aa15.14■□□□□ 0.01
HERC6-203ENST00000380265 TARBP1Q13395 1621 aaKnown RBP15.14■□□□□ 0.01
HERC6-203ENST00000380265 TRIM27P14373 513 aa15.13■□□□□ 0.01
HERC6-203ENST00000380265 SMC5Q8IY18 1101 aa15.13■□□□□ 0.01
HERC6-203ENST00000380265 ABCC2Q92887 1545 aa15.13■□□□□ 0.01
HERC6-203ENST00000380265 NUP160Q12769 1436 aa15.12■□□□□ 0.01
HERC6-203ENST00000380265 K7ELQ4 463 aaPredicted RBP15.12■□□□□ 0.01
HERC6-203ENST00000380265 OFD1O75665 1012 aa15.12■□□□□ 0.01
HERC6-203ENST00000380265 NOB1Q9ULX3 412 aaKnown RBP15.12■□□□□ 0.01
HERC6-203ENST00000380265 SLC12A5Q9H2X9 1139 aa15.12■□□□□ 0.01
HERC6-203ENST00000380265 UQCRHLA0A096LP55 91 aa15.11■□□□□ 0.01
HERC6-203ENST00000380265 UQCRHP07919 91 aa15.11■□□□□ 0.01
HERC6-203ENST00000380265 TMEM57Q8N5G2 664 aa15.11■□□□□ 0.01
HERC6-203ENST00000380265 CLASP1Q7Z460 1538 aa15.11■□□□□ 0.01
HERC6-203ENST00000380265 PTMAP06454 111 aaKnown RBP15.11■□□□□ 0.01
HERC6-203ENST00000380265 DNTTIP2Q5QJE6 756 aaKnown RBP15.11■□□□□ 0.01
HERC6-203ENST00000380265 SSH1Q8WYL5 1049 aa15.11■□□□□ 0.01
HERC6-203ENST00000380265 SCAF11Q99590 1463 aaKnown RBP15.11■□□□□ 0.01
HERC6-203ENST00000380265 CD2BP2O95400 341 aaKnown RBP15.11■□□□□ 0.01
HERC6-203ENST00000380265 SNX21Q969T3 373 aa15.1■□□□□ 0.01
HERC6-203ENST00000380265 SENP3Q9H4L4 574 aaPredicted RBP15.1■□□□□ 0.01
HERC6-203ENST00000380265 EIF2AK4Q9P2K8 1649 aaKnown RBP15.1■□□□□ 0.01
HERC6-203ENST00000380265 FOXD4L5Q5VV16 416 aaPredicted RBP15.1■□□□□ 0.01
HERC6-203ENST00000380265 ATF7IPQ6VMQ6 1270 aa15.1■□□□□ 0.01
HERC6-203ENST00000380265 FOXD4L4Q8WXT5 416 aaPredicted RBP15.1■□□□□ 0.01
HERC6-203ENST00000380265 GAS2L2Q8NHY3 880 aa15.09■□□□□ 0.01
HERC6-203ENST00000380265 TRAK1Q9UPV9 953 aa15.09■□□□□ 0.01
HERC6-203ENST00000380265 C1orf115Q9H7X2 142 aa15.09■□□□□ 0.01
HERC6-203ENST00000380265 PRDM10Q9NQV6 1147 aa15.09■□□□□ 0.01
HERC6-203ENST00000380265 GRIN2AQ12879 1464 aa15.09■□□□□ 0.01
HERC6-203ENST00000380265 VIRMAQ69YN4 1812 aaKnown RBP15.09■□□□□ 0.01
HERC6-203ENST00000380265 BAG4O95429 457 aaKnown RBP15.09■□□□□ 0.01
HERC6-203ENST00000380265 RBM25P49756 843 aaKnown RBP15.09■□□□□ 0.01
HERC6-203ENST00000380265 CHD1LQ86WJ1 897 aa15.09■□□□□ 0.01
HERC6-203ENST00000380265 HDAC1Q13547 482 aaPredicted RBP15.08■□□□□ 0.01
HERC6-203ENST00000380265 ZMYM3Q14202 1370 aa15.08■□□□□ 0.01
HERC6-203ENST00000380265 NPC1L1Q9UHC9 1359 aa15.08■□□□□ 0.01
HERC6-203ENST00000380265 ADCY10Q96PN6 1610 aa15.08■□□□□ 0
HERC6-203ENST00000380265 ATP10BO94823 1461 aa15.08■□□□□ 0
HERC6-203ENST00000380265 PLPPR3Q6T4P5 718 aa15.08■□□□□ 0
HERC6-203ENST00000380265 RIPK4P57078 832 aa15.07■□□□□ 0
HERC6-203ENST00000380265 CDC42BPAQ5VT25 1732 aa15.07■□□□□ 0
HERC6-203ENST00000380265 IPO8O15397 1037 aaKnown RBP15.07■□□□□ 0
HERC6-203ENST00000380265 KLHL40Q2TBA0 621 aa15.07■□□□□ 0
HERC6-203ENST00000380265 POLR3AO14802 1390 aaPredicted RBP15.07■□□□□ 0
HERC6-203ENST00000380265 TPRNQ4KMQ1 711 aa15.07■□□□□ 0
HERC6-203ENST00000380265 RNF214Q8ND24 703 aa15.07■□□□□ 0
HERC6-203ENST00000380265 PPP1R9BQ96SB3 815 aa15.07■□□□□ 0
HERC6-203ENST00000380265 NSD3Q9BZ95 1437 aa15.06■□□□□ 0
HERC6-203ENST00000380265 SLC24A1O60721 1099 aa15.06■□□□□ 0
HERC6-203ENST00000380265 ABCC10Q5T3U5 1492 aa15.06■□□□□ 0
HERC6-203ENST00000380265 RTEL1-TNFRSF6BF6WH68 1400 aa15.06■□□□□ 0
HERC6-203ENST00000380265 PRPF40AO75400 957 aaKnown RBP15.06■□□□□ 0
HERC6-203ENST00000380265 MAP7D2Q96T17 732 aa15.05■□□□□ 0
HERC6-203ENST00000380265 MPNDQ8N594 471 aa15.05■□□□□ -0
HERC6-203ENST00000380265 RBM27Q9P2N5 1060 aaKnown RBP15.05■□□□□ -0
HERC6-203ENST00000380265 TBC1D9Q6ZT07 1266 aa15.04■□□□□ -0
HERC6-203ENST00000380265 NUCB1Q02818 461 aa15.04■□□□□ -0
HERC6-203ENST00000380265 DDIT3P35638 169 aa15.04■□□□□ -0
HERC6-203ENST00000380265 ZSCAN23Q3MJ62 389 aa15.04■□□□□ -0
HERC6-203ENST00000380265 SYNMO15061 1565 aa15.04■□□□□ -0
HERC6-203ENST00000380265 SCAPERQ9BY12 1400 aa15.03■□□□□ -0
HERC6-203ENST00000380265 ARHGAP5Q13017 1502 aa15.03■□□□□ -0
HERC6-203ENST00000380265 RBSNQ9H1K0 784 aa15.03■□□□□ -0
HERC6-203ENST00000380265 ZHX1Q9UKY1 873 aaPredicted RBP15.03■□□□□ -0
HERC6-203ENST00000380265 PRIM1P49642 420 aaKnown RBP15.03■□□□□ -0
HERC6-203ENST00000380265 SAFB2Q14151 953 aaKnown RBP eCLIP15.03■□□□□ -0
HERC6-203ENST00000380265 APBB1O00213 710 aa15.02■□□□□ -0
HERC6-203ENST00000380265 ELL2O00472 640 aaPredicted RBP15.02■□□□□ -0
HERC6-203ENST00000380265 SYNJ2O15056 1496 aa15.02□□□□□ -0.01
HERC6-203ENST00000380265 SYCP2Q9BX26 1530 aa15.02□□□□□ -0.01
HERC6-203ENST00000380265 BMP2KLQ5H9B9 411 aa15.02□□□□□ -0.01
HERC6-203ENST00000380265 ZBTB40Q9NUA8 1239 aa15.01□□□□□ -0.01
HERC6-203ENST00000380265 NUCB2P80303 420 aa15.01□□□□□ -0.01
HERC6-203ENST00000380265 ADGRF5Q8IZF2 1346 aa15.01□□□□□ -0.01
HERC6-203ENST00000380265 ERCC6Q03468 1493 aa15.01□□□□□ -0.01
HERC6-203ENST00000380265 FOXD4L6Q3SYB3 417 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms