RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 C14orf37Q86TY3 774 aa10.62□□□□□ -0.71
PDLIM5-204ENST00000380176 NEXMIFQ5QGS0 1516 aa10.62□□□□□ -0.71
PDLIM5-204ENST00000380176 ZMYM4Q5VZL5 1548 aa10.61□□□□□ -0.71
PDLIM5-204ENST00000380176 DCAF8L1A6NGE4 600 aa10.61□□□□□ -0.71
PDLIM5-204ENST00000380176 RPGRIP1LQ68CZ1 1315 aa10.61□□□□□ -0.71
PDLIM5-204ENST00000380176 INSRP06213 1382 aa10.61□□□□□ -0.71
PDLIM5-204ENST00000380176 SBNO2Q9Y2G9 1366 aa10.61□□□□□ -0.71
PDLIM5-204ENST00000380176 NPC1L1Q9UHC9 1359 aa10.61□□□□□ -0.71
PDLIM5-204ENST00000380176 DIP2BQ9P265 1576 aa10.61□□□□□ -0.71
PDLIM5-204ENST00000380176 PDE3BQ13370 1112 aa10.61□□□□□ -0.71
PDLIM5-204ENST00000380176 RCAN3Q9UKA8 241 aa10.61□□□□□ -0.71
PDLIM5-204ENST00000380176 ARHGAP31Q2M1Z3 1444 aa10.6□□□□□ -0.71
PDLIM5-204ENST00000380176 RRP1P56182 461 aaKnown RBP10.6□□□□□ -0.71
PDLIM5-204ENST00000380176 PREX1Q8TCU6 1659 aa10.6□□□□□ -0.71
PDLIM5-204ENST00000380176 CFAP44Q96MT7 982 aa10.59□□□□□ -0.71
PDLIM5-204ENST00000380176 WDR43Q15061 677 aaKnown RBP eCLIP10.59□□□□□ -0.71
PDLIM5-204ENST00000380176 PAXIP1Q6ZW49 1069 aaPredicted RBP10.59□□□□□ -0.71
PDLIM5-204ENST00000380176 SLC12A5Q9H2X9 1139 aa10.59□□□□□ -0.71
PDLIM5-204ENST00000380176 ARHGEF28Q8N1W1 1705 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-204ENST00000380176 VGFO15240 615 aaPredicted RBP10.58□□□□□ -0.72
PDLIM5-204ENST00000380176 FBXO31Q5XUX0 539 aaPredicted RBP10.58□□□□□ -0.72
PDLIM5-204ENST00000380176 PLEKHH1Q9ULM0 1364 aa10.58□□□□□ -0.72
PDLIM5-204ENST00000380176 CCDC136Q96JN2 1154 aa10.57□□□□□ -0.72
PDLIM5-204ENST00000380176 TMEM131LA2VDJ0 1609 aa10.57□□□□□ -0.72
PDLIM5-204ENST00000380176 CCDC146Q8IYE0 955 aa10.56□□□□□ -0.72
PDLIM5-204ENST00000380176 EXOC6Q8TAG9 804 aa10.56□□□□□ -0.72
PDLIM5-204ENST00000380176 NSD3Q9BZ95 1437 aa10.56□□□□□ -0.72
PDLIM5-204ENST00000380176 PLIN1O60240 522 aa10.56□□□□□ -0.72
PDLIM5-204ENST00000380176 SAFB2Q14151 953 aaKnown RBP eCLIP10.56□□□□□ -0.72
PDLIM5-204ENST00000380176 SLC52A1Q9NWF4 448 aa10.56□□□□□ -0.72
PDLIM5-204ENST00000380176 TULP4Q9NRJ4 1543 aa10.55□□□□□ -0.72
PDLIM5-204ENST00000380176 STK26Q9P289 416 aa10.54□□□□□ -0.72
PDLIM5-204ENST00000380176 ZNF521Q96K83 1311 aa10.54□□□□□ -0.72
PDLIM5-204ENST00000380176 TNNT2P45379 298 aaPredicted RBP10.54□□□□□ -0.72
PDLIM5-204ENST00000380176 CABP2Q9NPB3 220 aa10.53□□□□□ -0.72
PDLIM5-204ENST00000380176 ZFYVE9O95405 1425 aa10.53□□□□□ -0.72
PDLIM5-204ENST00000380176 APAF1O14727 1248 aa10.53□□□□□ -0.72
PDLIM5-204ENST00000380176 DUSP27Q5VZP5 1158 aa10.53□□□□□ -0.72
PDLIM5-204ENST00000380176 CLTCQ00610 1675 aaKnown RBP10.53□□□□□ -0.72
PDLIM5-204ENST00000380176 EVC2Q86UK5 1308 aa10.52□□□□□ -0.73
PDLIM5-204ENST00000380176 MORC1Q86VD1 984 aa10.52□□□□□ -0.73
PDLIM5-204ENST00000380176 SPINK5Q9NQ38 1064 aaPredicted RBP10.52□□□□□ -0.73
PDLIM5-204ENST00000380176 SHPRHQ149N8 1683 aa10.51□□□□□ -0.73
PDLIM5-204ENST00000380176 GOLGA2Q08379 1002 aa10.51□□□□□ -0.73
PDLIM5-204ENST00000380176 MLECQ14165 292 aa10.51□□□□□ -0.73
PDLIM5-204ENST00000380176 KIF13AQ9H1H9 1805 aa10.5□□□□□ -0.73
PDLIM5-204ENST00000380176 POLR3AO14802 1390 aaPredicted RBP10.5□□□□□ -0.73
PDLIM5-204ENST00000380176 C20orf194Q5TEA3 1177 aa10.5□□□□□ -0.73
PDLIM5-204ENST00000380176 PTPRMP28827 1452 aa10.5□□□□□ -0.73
PDLIM5-204ENST00000380176 REREQ9P2R6 1566 aa10.5□□□□□ -0.73
PDLIM5-204ENST00000380176 USP32Q8NFA0 1604 aa10.5□□□□□ -0.73
PDLIM5-204ENST00000380176 SLFN5Q08AF3 891 aa10.49□□□□□ -0.73
PDLIM5-204ENST00000380176 AGLP35573 1532 aa10.49□□□□□ -0.73
PDLIM5-204ENST00000380176 PRAM1Q96QH2 718 aa10.49□□□□□ -0.73
PDLIM5-204ENST00000380176 CRBNQ96SW2 442 aa10.49□□□□□ -0.73
PDLIM5-204ENST00000380176 MINK1Q8N4C8 1332 aaPredicted RBP10.49□□□□□ -0.73
PDLIM5-204ENST00000380176 ALKQ9UM73 1620 aa10.49□□□□□ -0.73
PDLIM5-204ENST00000380176 STAG3Q9UJ98 1225 aa10.48□□□□□ -0.73
PDLIM5-204ENST00000380176 CGNL1Q0VF96 1302 aa10.48□□□□□ -0.73
PDLIM5-204ENST00000380176 ANKRD36BQ8N2N9 1353 aa10.48□□□□□ -0.73
PDLIM5-204ENST00000380176 YTHDC2Q9H6S0 1430 aaKnown RBP10.48□□□□□ -0.73
PDLIM5-204ENST00000380176 TRMT2AQ8IZ69 625 aaKnown RBP10.48□□□□□ -0.73
PDLIM5-204ENST00000380176 PUS7Q96PZ0 661 aaKnown RBP10.48□□□□□ -0.73
PDLIM5-204ENST00000380176 FANCIQ9NVI1 1328 aa10.48□□□□□ -0.73
PDLIM5-204ENST00000380176 MTHFSP49914 203 aa10.47□□□□□ -0.73
PDLIM5-204ENST00000380176 SRPK2P78362 688 aaKnown RBP10.47□□□□□ -0.73
PDLIM5-204ENST00000380176 A0A1W2PP64 1363 aa10.47□□□□□ -0.73
PDLIM5-204ENST00000380176 A2ML1A8K2U0 1454 aa10.46□□□□□ -0.74
PDLIM5-204ENST00000380176 SPATA31D1Q6ZQQ2 1576 aa10.46□□□□□ -0.74
PDLIM5-204ENST00000380176 POGKQ9P215 609 aa10.45□□□□□ -0.74
PDLIM5-204ENST00000380176 PLEKHG5O94827 1062 aa10.45□□□□□ -0.74
PDLIM5-204ENST00000380176 ANP32EQ9BTT0 268 aa10.45□□□□□ -0.74
PDLIM5-204ENST00000380176 IFNLR1Q8IU57 520 aaPredicted RBP10.44□□□□□ -0.74
PDLIM5-204ENST00000380176 RRP7AQ9Y3A4 280 aaKnown RBP10.44□□□□□ -0.74
PDLIM5-204ENST00000380176 CD163L1Q9NR16 1453 aa10.44□□□□□ -0.74
PDLIM5-204ENST00000380176 NEUROD2Q15784 382 aa10.44□□□□□ -0.74
PDLIM5-204ENST00000380176 WWC1Q8IX03 1113 aa10.44□□□□□ -0.74
PDLIM5-204ENST00000380176 SETD1AO15047 1707 aaKnown RBP10.44□□□□□ -0.74
PDLIM5-204ENST00000380176 ARHGEF40Q8TER5 1519 aa10.44□□□□□ -0.74
PDLIM5-204ENST00000380176 GGNBP2Q9H3C7 697 aa10.44□□□□□ -0.74
PDLIM5-204ENST00000380176 WAPLQ7Z5K2 1190 aa10.43□□□□□ -0.74
PDLIM5-204ENST00000380176 SKAP1Q86WV1 359 aa10.43□□□□□ -0.74
PDLIM5-204ENST00000380176 ABCC11Q96J66 1382 aa10.43□□□□□ -0.74
PDLIM5-204ENST00000380176 NKTRP30414 1462 aaKnown RBP10.43□□□□□ -0.74
PDLIM5-204ENST00000380176 RIMS2Q9UQ26 1411 aa10.43□□□□□ -0.74
PDLIM5-204ENST00000380176 CDK19Q9BWU1 502 aa10.43□□□□□ -0.74
PDLIM5-204ENST00000380176 E9PSI1 815 aa10.42□□□□□ -0.74
PDLIM5-204ENST00000380176 BCAR3O75815 825 aa10.42□□□□□ -0.74
PDLIM5-204ENST00000380176 TCP11L2Q8N4U5 519 aa10.42□□□□□ -0.74
PDLIM5-204ENST00000380176 RUNDC1Q96C34 613 aa10.42□□□□□ -0.74
PDLIM5-204ENST00000380176 NSD2O96028 1365 aa10.42□□□□□ -0.74
PDLIM5-204ENST00000380176 IQSEC2Q5JU85 1478 aa10.42□□□□□ -0.74
PDLIM5-204ENST00000380176 ATAD2Q6PL18 1390 aa10.41□□□□□ -0.74
PDLIM5-204ENST00000380176 FYB1O15117 783 aa10.41□□□□□ -0.74
PDLIM5-204ENST00000380176 ZMYM3Q14202 1370 aa10.41□□□□□ -0.74
PDLIM5-204ENST00000380176 NINLQ9Y2I6 1382 aa10.41□□□□□ -0.74
PDLIM5-204ENST00000380176 CABP1Q9NZU7 370 aa10.41□□□□□ -0.74
PDLIM5-204ENST00000380176 NRXN3Q9Y4C0 1643 aa10.41□□□□□ -0.74
PDLIM5-204ENST00000380176 CFAP53Q96M91 514 aa10.4□□□□□ -0.74
PDLIM5-204ENST00000380176 ANKRD26Q9UPS8 1709 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms