RNA–Protein interactions for RNA: ENST00000379883.2

DDX58-202, Transcript of DExD/H-box helicase 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX58, Length 4,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-202ENST00000379883 DISP3Q9P2K9 1392 aa8.94□□□□□ -0.98
DDX58-202ENST00000379883 KIAA0586Q9BVV6 1533 aa8.94□□□□□ -0.98
DDX58-202ENST00000379883 RARSP54136 660 aaKnown RBP8.94□□□□□ -0.98
DDX58-202ENST00000379883 NPC1L1Q9UHC9 1359 aa8.94□□□□□ -0.98
DDX58-202ENST00000379883 NCOA3Q9Y6Q9 1424 aa8.94□□□□□ -0.98
DDX58-202ENST00000379883 MBD3O95983 291 aa8.94□□□□□ -0.98
DDX58-202ENST00000379883 PPP4R3BQ5MIZ7 849 aa8.94□□□□□ -0.98
DDX58-202ENST00000379883 DIAPH3Q9NSV4 1193 aa8.94□□□□□ -0.98
DDX58-202ENST00000379883 TOPBP1Q92547 1522 aa8.94□□□□□ -0.98
DDX58-202ENST00000379883 LRRIQ1Q96JM4 1722 aa8.94□□□□□ -0.98
DDX58-202ENST00000379883 BAG4O95429 457 aaKnown RBP8.94□□□□□ -0.98
DDX58-202ENST00000379883 MCTP1Q6DN14 999 aa8.94□□□□□ -0.98
DDX58-202ENST00000379883 MYRIPQ8NFW9 859 aa8.94□□□□□ -0.98
DDX58-202ENST00000379883 CFAP53Q96M91 514 aa8.94□□□□□ -0.98
DDX58-202ENST00000379883 ZNF692Q9BU19 519 aaPredicted RBP8.94□□□□□ -0.98
DDX58-202ENST00000379883 PCDHB15Q9Y5E8 787 aa8.94□□□□□ -0.98
DDX58-202ENST00000379883 NUP160Q12769 1436 aa8.94□□□□□ -0.98
DDX58-202ENST00000379883 IPO8O15397 1037 aaKnown RBP8.94□□□□□ -0.98
DDX58-202ENST00000379883 HDAC1Q13547 482 aaPredicted RBP8.94□□□□□ -0.98
DDX58-202ENST00000379883 CLEC17AQ6ZS10 378 aa8.94□□□□□ -0.98
DDX58-202ENST00000379883 ZSCAN23Q3MJ62 389 aa8.93□□□□□ -0.98
DDX58-202ENST00000379883 KIF3AQ9Y496 699 aa8.93□□□□□ -0.98
DDX58-202ENST00000379883 EIF2AK4Q9P2K8 1649 aaKnown RBP8.93□□□□□ -0.98
DDX58-202ENST00000379883 DDIT3P35638 169 aa8.93□□□□□ -0.98
DDX58-202ENST00000379883 CASC1Q6TDU7 716 aa8.93□□□□□ -0.98
DDX58-202ENST00000379883 WWC1Q8IX03 1113 aa8.93□□□□□ -0.98
DDX58-202ENST00000379883 TESK2Q96S53 571 aa8.93□□□□□ -0.98
DDX58-202ENST00000379883 ZNF771Q7L3S4 317 aaPredicted RBP8.92□□□□□ -0.98
DDX58-202ENST00000379883 RUNDC1Q96C34 613 aa8.92□□□□□ -0.98
DDX58-202ENST00000379883 CCDC66A2RUB6 948 aa8.92□□□□□ -0.98
DDX58-202ENST00000379883 NBPF1Q3BBV0 1214 aa8.92□□□□□ -0.98
DDX58-202ENST00000379883 STAC3Q96MF2 364 aa8.92□□□□□ -0.98
DDX58-202ENST00000379883 FOXD4L1Q9NU39 408 aa8.92□□□□□ -0.98
DDX58-202ENST00000379883 ASXL1Q8IXJ9 1541 aa8.92□□□□□ -0.98
DDX58-202ENST00000379883 TPM3P06753 285 aa8.92□□□□□ -0.98
DDX58-202ENST00000379883 RABEP1Q15276 862 aa8.92□□□□□ -0.98
DDX58-202ENST00000379883 PDLIM2Q96JY6 352 aa8.92□□□□□ -0.98
DDX58-202ENST00000379883 PLXNC1O60486 1568 aa8.92□□□□□ -0.98
DDX58-202ENST00000379883 ITPRIPQ8IWB1 547 aa8.91□□□□□ -0.98
DDX58-202ENST00000379883 WDR62O43379 1518 aa8.91□□□□□ -0.98
DDX58-202ENST00000379883 SSFA2P28290 1259 aa8.91□□□□□ -0.98
DDX58-202ENST00000379883 AMER1Q5JTC6 1135 aaPredicted RBP8.91□□□□□ -0.98
DDX58-202ENST00000379883 LRSAM1Q6UWE0 723 aa8.91□□□□□ -0.98
DDX58-202ENST00000379883 ITSN2Q9NZM3 1697 aa8.91□□□□□ -0.98
DDX58-202ENST00000379883 TDRD9Q8NDG6 1382 aaKnown RBP8.91□□□□□ -0.98
DDX58-202ENST00000379883 ST18O60284 1047 aa8.91□□□□□ -0.98
DDX58-202ENST00000379883 CBX1P83916 185 aa8.91□□□□□ -0.98
DDX58-202ENST00000379883 TROQ12816 1431 aaPredicted RBP8.9□□□□□ -0.98
DDX58-202ENST00000379883 PDCL2Q8N4E4 241 aa8.9□□□□□ -0.98
DDX58-202ENST00000379883 FAM184AQ8NB25 1140 aa8.9□□□□□ -0.98
DDX58-202ENST00000379883 NEUROD2Q15784 382 aa8.9□□□□□ -0.98
DDX58-202ENST00000379883 TSPY26PQ9H489 355 aa8.9□□□□□ -0.98
DDX58-202ENST00000379883 LAMC1P11047 1609 aa8.9□□□□□ -0.99
DDX58-202ENST00000379883 CEP170Q5SW79 1584 aa8.9□□□□□ -0.99
DDX58-202ENST00000379883 RSPH4AQ5TD94 716 aa8.89□□□□□ -0.99
DDX58-202ENST00000379883 SMC4Q9NTJ3 1288 aa8.89□□□□□ -0.99
DDX58-202ENST00000379883 KDM5DQ9BY66 1539 aa8.89□□□□□ -0.99
DDX58-202ENST00000379883 C9orf84Q5VXU9 1444 aa8.89□□□□□ -0.99
DDX58-202ENST00000379883 PDIA4P13667 645 aaKnown RBP8.89□□□□□ -0.99
DDX58-202ENST00000379883 BMP2KLQ5H9B9 411 aa8.89□□□□□ -0.99
DDX58-202ENST00000379883 FEZ1Q99689 392 aa8.89□□□□□ -0.99
DDX58-202ENST00000379883 SPINK5Q9NQ38 1064 aaPredicted RBP8.89□□□□□ -0.99
DDX58-202ENST00000379883 SHANK2Q9UPX8 1470 aa8.89□□□□□ -0.99
DDX58-202ENST00000379883 IQGAP2Q13576 1575 aa8.89□□□□□ -0.99
DDX58-202ENST00000379883 GOLGA6L6A8MZA4 724 aa8.89□□□□□ -0.99
DDX58-202ENST00000379883 ZSCAN20P17040 1043 aaPredicted RBP8.89□□□□□ -0.99
DDX58-202ENST00000379883 UVSSAQ2YD98 709 aa8.89□□□□□ -0.99
DDX58-202ENST00000379883 RBSNQ9H1K0 784 aa8.89□□□□□ -0.99
DDX58-202ENST00000379883 EIF4G3O43432 1585 aaKnown RBP8.88□□□□□ -0.99
DDX58-202ENST00000379883 NCBP3Q53F19 620 aaKnown RBP8.88□□□□□ -0.99
DDX58-202ENST00000379883 NAP1L2Q9ULW6 460 aaPredicted RBP8.88□□□□□ -0.99
DDX58-202ENST00000379883 PRDM15P57071 1507 aaPredicted RBP8.88□□□□□ -0.99
DDX58-202ENST00000379883 PRPF40AO75400 957 aaKnown RBP8.88□□□□□ -0.99
DDX58-202ENST00000379883 CDC45O75419 566 aa8.88□□□□□ -0.99
DDX58-202ENST00000379883 PLEKHD1A6NEE1 506 aa8.88□□□□□ -0.99
DDX58-202ENST00000379883 IPO4Q8TEX9 1081 aaKnown RBP8.88□□□□□ -0.99
DDX58-202ENST00000379883 GCC1Q96CN9 775 aa8.87□□□□□ -0.99
DDX58-202ENST00000379883 TRPM1Q7Z4N2 1603 aa8.87□□□□□ -0.99
DDX58-202ENST00000379883 PRIM1P49642 420 aaKnown RBP8.87□□□□□ -0.99
DDX58-202ENST00000379883 CHD1LQ86WJ1 897 aa8.87□□□□□ -0.99
DDX58-202ENST00000379883 TSPYL1Q9H0U9 437 aa8.87□□□□□ -0.99
DDX58-202ENST00000379883 CCDC27Q2M243 656 aa8.87□□□□□ -0.99
DDX58-202ENST00000379883 TAF7LQ5H9L4 462 aa8.87□□□□□ -0.99
DDX58-202ENST00000379883 MORC1Q86VD1 984 aa8.87□□□□□ -0.99
DDX58-202ENST00000379883 BCL2L13Q9BXK5 485 aa8.87□□□□□ -0.99
DDX58-202ENST00000379883 GTF2F1P35269 517 aaKnown RBP eCLIP8.86□□□□□ -0.99
DDX58-202ENST00000379883 CCDC141Q6ZP82 1450 aa8.86□□□□□ -0.99
DDX58-202ENST00000379883 NUCB1Q02818 461 aa8.86□□□□□ -0.99
DDX58-202ENST00000379883 NOLC1Q14978 699 aaKnown RBP eCLIP8.86□□□□□ -0.99
DDX58-202ENST00000379883 RTEL1-TNFRSF6BF6WH68 1400 aa8.86□□□□□ -0.99
DDX58-202ENST00000379883 GABPB1Q06547 395 aaPredicted RBP8.86□□□□□ -0.99
DDX58-202ENST00000379883 PIBF1Q8WXW3 757 aa8.86□□□□□ -0.99
DDX58-202ENST00000379883 LMBRD1Q9NUN5 540 aa8.86□□□□□ -0.99
DDX58-202ENST00000379883 POLR3AO14802 1390 aaPredicted RBP8.86□□□□□ -0.99
DDX58-202ENST00000379883 RLBP1P12271 317 aa8.85□□□□□ -0.99
DDX58-202ENST00000379883 TCP11L2Q8N4U5 519 aa8.85□□□□□ -0.99
DDX58-202ENST00000379883 OGFRQ9NZT2 677 aa8.85□□□□□ -0.99
DDX58-202ENST00000379883 PTPRGP23470 1445 aa8.85□□□□□ -0.99
DDX58-202ENST00000379883 GPATCH8Q9UKJ3 1502 aaKnown RBP8.85□□□□□ -0.99
DDX58-202ENST00000379883 LNPKQ9C0E8 428 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms