RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 ADAMTS8Q9UP79 889 aa20.12■□□□□ 0.81
SNX2-201ENST00000379516 ANKRD36BQ8N2N9 1353 aa20.12■□□□□ 0.81
SNX2-201ENST00000379516 BLMP54132 1417 aaPredicted RBP20.12■□□□□ 0.81
SNX2-201ENST00000379516 TMEM2Q9UHN6 1383 aa20.11■□□□□ 0.81
SNX2-201ENST00000379516 IRX6P78412 446 aaPredicted RBP20.11■□□□□ 0.81
SNX2-201ENST00000379516 PLPPR3Q6T4P5 718 aa20.11■□□□□ 0.81
SNX2-201ENST00000379516 MORC1Q86VD1 984 aa20.11■□□□□ 0.81
SNX2-201ENST00000379516 WAPLQ7Z5K2 1190 aa20.1■□□□□ 0.81
SNX2-201ENST00000379516 CGNL1Q0VF96 1302 aa20.09■□□□□ 0.81
SNX2-201ENST00000379516 ATAD2Q6PL18 1390 aa20.09■□□□□ 0.81
SNX2-201ENST00000379516 ABCC11Q96J66 1382 aa20.09■□□□□ 0.81
SNX2-201ENST00000379516 SETD1AO15047 1707 aaKnown RBP20.09■□□□□ 0.81
SNX2-201ENST00000379516 NRXN3Q9Y4C0 1643 aa20.09■□□□□ 0.81
SNX2-201ENST00000379516 DLC1Q96QB1 1528 aa20.09■□□□□ 0.81
SNX2-201ENST00000379516 UBR1Q8IWV7 1749 aa20.09■□□□□ 0.81
SNX2-201ENST00000379516 METP08581 1390 aa20.08■□□□□ 0.81
SNX2-201ENST00000379516 NINLQ9Y2I6 1382 aa20.08■□□□□ 0.81
SNX2-201ENST00000379516 CDK19Q9BWU1 502 aa20.08■□□□□ 0.81
SNX2-201ENST00000379516 NLRP1Q9C000 1473 aa20.08■□□□□ 0.81
SNX2-201ENST00000379516 PLEKHH1Q9ULM0 1364 aa20.06■□□□□ 0.8
SNX2-201ENST00000379516 TNNT2P45379 298 aaPredicted RBP20.05■□□□□ 0.8
SNX2-201ENST00000379516 PDE3BQ13370 1112 aa20.05■□□□□ 0.8
SNX2-201ENST00000379516 PELP1Q8IZL8 1130 aaKnown RBP20.05■□□□□ 0.8
SNX2-201ENST00000379516 A0A1W2PP64 1363 aa20.05■□□□□ 0.8
SNX2-201ENST00000379516 USP32Q8NFA0 1604 aa20.05■□□□□ 0.8
SNX2-201ENST00000379516 C3P01024 1663 aa20.04■□□□□ 0.8
SNX2-201ENST00000379516 TXNDC2Q86VQ3 553 aa20.03■□□□□ 0.8
SNX2-201ENST00000379516 TERF2IPQ9NYB0 399 aa20.03■□□□□ 0.8
SNX2-201ENST00000379516 FER1L4A9Z1Z3 1794 aa20.03■□□□□ 0.8
SNX2-201ENST00000379516 LTKP29376 864 aa20.03■□□□□ 0.8
SNX2-201ENST00000379516 NSD2O96028 1365 aa20.01■□□□□ 0.79
SNX2-201ENST00000379516 CABP1Q9NZU7 370 aa20■□□□□ 0.79
SNX2-201ENST00000379516 EID1Q9Y6B2 187 aa20■□□□□ 0.79
SNX2-201ENST00000379516 POLR3AO14802 1390 aaPredicted RBP20■□□□□ 0.79
SNX2-201ENST00000379516 ERICH6BQ5W0A0 696 aa20■□□□□ 0.79
SNX2-201ENST00000379516 HDGFL2Q7Z4V5 671 aaPredicted RBP20■□□□□ 0.79
SNX2-201ENST00000379516 PLEKHG1Q9ULL1 1385 aa20■□□□□ 0.79
SNX2-201ENST00000379516 SIRT1Q96EB6 747 aa19.99■□□□□ 0.79
SNX2-201ENST00000379516 ADAMTS13Q76LX8 1427 aa19.98■□□□□ 0.79
SNX2-201ENST00000379516 CDCA7LQ96GN5 454 aa19.98■□□□□ 0.79
SNX2-201ENST00000379516 CD163L1Q9NR16 1453 aa19.98■□□□□ 0.79
SNX2-201ENST00000379516 TECPR2O15040 1411 aa19.97■□□□□ 0.79
SNX2-201ENST00000379516 FAM135BQ49AJ0 1406 aa19.97■□□□□ 0.79
SNX2-201ENST00000379516 WASLO00401 505 aaPredicted RBP19.97■□□□□ 0.79
SNX2-201ENST00000379516 CCDC146Q8IYE0 955 aa19.97■□□□□ 0.79
SNX2-201ENST00000379516 MTHFSP49914 203 aa19.96■□□□□ 0.79
SNX2-201ENST00000379516 THEMISQ8N1K5 641 aaPredicted RBP19.96■□□□□ 0.79
SNX2-201ENST00000379516 GGNBP2Q9H3C7 697 aa19.96■□□□□ 0.79
SNX2-201ENST00000379516 DNAJC5Q9H3Z4 198 aa19.95■□□□□ 0.78
SNX2-201ENST00000379516 RNF123Q5XPI4 1314 aa19.95■□□□□ 0.78
SNX2-201ENST00000379516 SLC26A8Q96RN1 970 aa19.94■□□□□ 0.78
SNX2-201ENST00000379516 KNDC1Q76NI1 1749 aa19.94■□□□□ 0.78
SNX2-201ENST00000379516 FYB1O15117 783 aa19.93■□□□□ 0.78
SNX2-201ENST00000379516 CFAP53Q96M91 514 aa19.93■□□□□ 0.78
SNX2-201ENST00000379516 SLIT1O75093 1534 aa19.93■□□□□ 0.78
SNX2-201ENST00000379516 CPS1P31327 1500 aa19.93■□□□□ 0.78
SNX2-201ENST00000379516 ARHGAP23Q9P227 1491 aa19.93■□□□□ 0.78
SNX2-201ENST00000379516 ROBO2Q9HCK4 1378 aa19.92■□□□□ 0.78
SNX2-201ENST00000379516 PPP4R2Q9NY27 417 aa19.91■□□□□ 0.78
SNX2-201ENST00000379516 APAF1O14727 1248 aa19.91■□□□□ 0.78
SNX2-201ENST00000379516 RCAN3Q9UKA8 241 aa19.91■□□□□ 0.78
SNX2-201ENST00000379516 NUDT16Q96DE0 195 aaKnown RBP19.9■□□□□ 0.78
SNX2-201ENST00000379516 MED14O60244 1454 aa19.9■□□□□ 0.78
SNX2-201ENST00000379516 ATP7BP35670 1465 aa19.9■□□□□ 0.78
SNX2-201ENST00000379516 PPIP5K1Q6PFW1 1433 aa19.88■□□□□ 0.77
SNX2-201ENST00000379516 ZNF521Q96K83 1311 aa19.88■□□□□ 0.77
SNX2-201ENST00000379516 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.88■□□□□ 0.77
SNX2-201ENST00000379516 TBX22Q9Y458 520 aa19.87■□□□□ 0.77
SNX2-201ENST00000379516 GOLGA2Q08379 1002 aa19.87■□□□□ 0.77
SNX2-201ENST00000379516 CCDC61Q9Y6R9 512 aa19.87■□□□□ 0.77
SNX2-201ENST00000379516 PTPRUQ92729 1446 aa19.86■□□□□ 0.77
SNX2-201ENST00000379516 SHPRHQ149N8 1683 aa19.86■□□□□ 0.77
SNX2-201ENST00000379516 NCKAP5LQ9HCH0 1330 aa19.86■□□□□ 0.77
SNX2-201ENST00000379516 AMOTL2Q9Y2J4 779 aa19.85■□□□□ 0.77
SNX2-201ENST00000379516 RIMS1Q86UR5 1692 aaKnown RBP19.85■□□□□ 0.77
SNX2-201ENST00000379516 RRP1P56182 461 aaKnown RBP19.85■□□□□ 0.77
SNX2-201ENST00000379516 CPSF1Q10570 1443 aaKnown RBP19.84■□□□□ 0.77
SNX2-201ENST00000379516 NGEFQ8N5V2 710 aa19.83■□□□□ 0.77
SNX2-201ENST00000379516 RUNDC1Q96C34 613 aa19.83■□□□□ 0.77
SNX2-201ENST00000379516 ANKRD26Q9UPS8 1709 aa19.82■□□□□ 0.76
SNX2-201ENST00000379516 CEP170BQ9Y4F5 1589 aaPredicted RBP19.82■□□□□ 0.76
SNX2-201ENST00000379516 DUSP27Q5VZP5 1158 aa19.82■□□□□ 0.76
SNX2-201ENST00000379516 PRR36Q9H6K5 1346 aa19.81■□□□□ 0.76
SNX2-201ENST00000379516 EDC4Q6P2E9 1401 aaKnown RBP19.81■□□□□ 0.76
SNX2-201ENST00000379516 U2AF1L5P0DN76 240 aaPredicted RBP19.81■□□□□ 0.76
SNX2-201ENST00000379516 U2AF1Q01081 240 aaKnown RBP eCLIP19.81■□□□□ 0.76
SNX2-201ENST00000379516 SLFN5Q08AF3 891 aa19.81■□□□□ 0.76
SNX2-201ENST00000379516 B4GALNT3Q6L9W6 998 aa19.81■□□□□ 0.76
SNX2-201ENST00000379516 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.81■□□□□ 0.76
SNX2-201ENST00000379516 KIF20BQ96Q89 1820 aa19.8■□□□□ 0.76
SNX2-201ENST00000379516 NUTM2FA1L443 756 aa19.79■□□□□ 0.76
SNX2-201ENST00000379516 ADGRB2O60241 1585 aa19.79■□□□□ 0.76
SNX2-201ENST00000379516 CDC42BPGQ6DT37 1551 aa19.79■□□□□ 0.76
SNX2-201ENST00000379516 DIP2AQ14689 1571 aa19.78■□□□□ 0.76
SNX2-201ENST00000379516 TCP11L2Q8N4U5 519 aa19.78■□□□□ 0.76
SNX2-201ENST00000379516 NEUROD2Q15784 382 aa19.78■□□□□ 0.76
SNX2-201ENST00000379516 ZNF692Q9BU19 519 aaPredicted RBP19.78■□□□□ 0.76
SNX2-201ENST00000379516 U2SURPO15042 1029 aaKnown RBP19.77■□□□□ 0.76
SNX2-201ENST00000379516 NME9Q86XW9 330 aa19.77■□□□□ 0.76
SNX2-201ENST00000379516 PTCH1Q13635 1447 aa19.77■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms