RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 TULP4Q9NRJ4 1543 aa19.73■□□□□ 0.75
PRNP-201ENST00000379440 RCAN3Q9UKA8 241 aa19.72■□□□□ 0.75
PRNP-201ENST00000379440 TNNT2P45379 298 aaPredicted RBP19.7■□□□□ 0.74
PRNP-201ENST00000379440 CCDC146Q8IYE0 955 aa19.7■□□□□ 0.74
PRNP-201ENST00000379440 MORC1Q86VD1 984 aa19.69■□□□□ 0.74
PRNP-201ENST00000379440 PLEKHH1Q9ULM0 1364 aa19.69■□□□□ 0.74
PRNP-201ENST00000379440 ARHGEF40Q8TER5 1519 aa19.69■□□□□ 0.74
PRNP-201ENST00000379440 RRP1P56182 461 aaKnown RBP19.69■□□□□ 0.74
PRNP-201ENST00000379440 PRAM1Q96QH2 718 aa19.68■□□□□ 0.74
PRNP-201ENST00000379440 YTHDC2Q9H6S0 1430 aaKnown RBP19.67■□□□□ 0.74
PRNP-201ENST00000379440 MINK1Q8N4C8 1332 aaPredicted RBP19.67■□□□□ 0.74
PRNP-201ENST00000379440 PUS7Q96PZ0 661 aaKnown RBP19.67■□□□□ 0.74
PRNP-201ENST00000379440 SPATA31D1Q6ZQQ2 1576 aa19.67■□□□□ 0.74
PRNP-201ENST00000379440 A2ML1A8K2U0 1454 aa19.67■□□□□ 0.74
PRNP-201ENST00000379440 PTPRMP28827 1452 aa19.67■□□□□ 0.74
PRNP-201ENST00000379440 SRPK2P78362 688 aaKnown RBP19.66■□□□□ 0.74
PRNP-201ENST00000379440 ALKQ9UM73 1620 aa19.66■□□□□ 0.74
PRNP-201ENST00000379440 POGKQ9P215 609 aa19.66■□□□□ 0.74
PRNP-201ENST00000379440 ESF1Q9H501 851 aaKnown RBP19.65■□□□□ 0.74
PRNP-201ENST00000379440 RBM19Q9Y4C8 960 aaKnown RBP19.65■□□□□ 0.74
PRNP-201ENST00000379440 ZMYM3Q14202 1370 aa19.64■□□□□ 0.73
PRNP-201ENST00000379440 ANKRD36BQ8N2N9 1353 aa19.63■□□□□ 0.73
PRNP-201ENST00000379440 CGNL1Q0VF96 1302 aa19.63■□□□□ 0.73
PRNP-201ENST00000379440 APAF1O14727 1248 aa19.63■□□□□ 0.73
PRNP-201ENST00000379440 CCDC136Q96JN2 1154 aa19.62■□□□□ 0.73
PRNP-201ENST00000379440 RIMS2Q9UQ26 1411 aa19.62■□□□□ 0.73
PRNP-201ENST00000379440 ZNF521Q96K83 1311 aa19.62■□□□□ 0.73
PRNP-201ENST00000379440 POLR3AO14802 1390 aaPredicted RBP19.61■□□□□ 0.73
PRNP-201ENST00000379440 EXOC6Q8TAG9 804 aa19.6■□□□□ 0.73
PRNP-201ENST00000379440 PLIN1O60240 522 aa19.59■□□□□ 0.73
PRNP-201ENST00000379440 GOLGA2Q08379 1002 aa19.59■□□□□ 0.73
PRNP-201ENST00000379440 DUSP27Q5VZP5 1158 aa19.59■□□□□ 0.73
PRNP-201ENST00000379440 A0A1W2PP64 1363 aa19.59■□□□□ 0.73
PRNP-201ENST00000379440 USP32Q8NFA0 1604 aa19.58■□□□□ 0.73
PRNP-201ENST00000379440 MTHFSP49914 203 aa19.58■□□□□ 0.73
PRNP-201ENST00000379440 WAPLQ7Z5K2 1190 aa19.58■□□□□ 0.73
PRNP-201ENST00000379440 CDK19Q9BWU1 502 aa19.57■□□□□ 0.72
PRNP-201ENST00000379440 PLEKHG5O94827 1062 aa19.57■□□□□ 0.72
PRNP-201ENST00000379440 SPINK5Q9NQ38 1064 aaPredicted RBP19.56■□□□□ 0.72
PRNP-201ENST00000379440 ATAD2Q6PL18 1390 aa19.54■□□□□ 0.72
PRNP-201ENST00000379440 SLFN5Q08AF3 891 aa19.54■□□□□ 0.72
PRNP-201ENST00000379440 GGNBP2Q9H3C7 697 aa19.54■□□□□ 0.72
PRNP-201ENST00000379440 NINLQ9Y2I6 1382 aa19.53■□□□□ 0.72
PRNP-201ENST00000379440 SHPRHQ149N8 1683 aa19.53■□□□□ 0.72
PRNP-201ENST00000379440 CABP1Q9NZU7 370 aa19.52■□□□□ 0.72
PRNP-201ENST00000379440 DMRT2Q9Y5R5 561 aa19.52■□□□□ 0.72
PRNP-201ENST00000379440 NSD2O96028 1365 aa19.52■□□□□ 0.72
PRNP-201ENST00000379440 ABCC11Q96J66 1382 aa19.52■□□□□ 0.72
PRNP-201ENST00000379440 TERF2IPQ9NYB0 399 aa19.52■□□□□ 0.72
PRNP-201ENST00000379440 SETD1AO15047 1707 aaKnown RBP19.52■□□□□ 0.71
PRNP-201ENST00000379440 CD163L1Q9NR16 1453 aa19.52■□□□□ 0.71
PRNP-201ENST00000379440 TNRQ92752 1358 aa19.51■□□□□ 0.71
PRNP-201ENST00000379440 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.51■□□□□ 0.71
PRNP-201ENST00000379440 METP08581 1390 aa19.51■□□□□ 0.71
PRNP-201ENST00000379440 TRMT2AQ8IZ69 625 aaKnown RBP19.5■□□□□ 0.71
PRNP-201ENST00000379440 NRXN3Q9Y4C0 1643 aa19.5■□□□□ 0.71
PRNP-201ENST00000379440 FYB1O15117 783 aa19.49■□□□□ 0.71
PRNP-201ENST00000379440 CFAP53Q96M91 514 aa19.49■□□□□ 0.71
PRNP-201ENST00000379440 NEUROD2Q15784 382 aa19.49■□□□□ 0.71
PRNP-201ENST00000379440 RRP7AQ9Y3A4 280 aaKnown RBP19.48■□□□□ 0.71
PRNP-201ENST00000379440 CEBPAP49715 358 aaPredicted RBP19.48■□□□□ 0.71
PRNP-201ENST00000379440 C20orf194Q5TEA3 1177 aa19.48■□□□□ 0.71
PRNP-201ENST00000379440 TXNDC2Q86VQ3 553 aa19.48■□□□□ 0.71
PRNP-201ENST00000379440 DLC1Q96QB1 1528 aa19.48■□□□□ 0.71
PRNP-201ENST00000379440 CRBNQ96SW2 442 aa19.48■□□□□ 0.71
PRNP-201ENST00000379440 HDGFL2Q7Z4V5 671 aaPredicted RBP19.47■□□□□ 0.71
PRNP-201ENST00000379440 RUNDC1Q96C34 613 aa19.47■□□□□ 0.71
PRNP-201ENST00000379440 WWC1Q8IX03 1113 aa19.47■□□□□ 0.71
PRNP-201ENST00000379440 TCP11L2Q8N4U5 519 aa19.46■□□□□ 0.71
PRNP-201ENST00000379440 E9PSI1 815 aa19.45■□□□□ 0.7
PRNP-201ENST00000379440 HDGFP51858 240 aaKnown RBP19.45■□□□□ 0.7
PRNP-201ENST00000379440 PLPPR3Q6T4P5 718 aa19.44■□□□□ 0.7
PRNP-201ENST00000379440 NGEFQ8N5V2 710 aa19.44■□□□□ 0.7
PRNP-201ENST00000379440 U2AF1L5P0DN76 240 aaPredicted RBP19.44■□□□□ 0.7
PRNP-201ENST00000379440 U2AF1Q01081 240 aaKnown RBP eCLIP19.44■□□□□ 0.7
PRNP-201ENST00000379440 NLRP1Q9C000 1473 aa19.43■□□□□ 0.7
PRNP-201ENST00000379440 TMEM2Q9UHN6 1383 aa19.43■□□□□ 0.7
PRNP-201ENST00000379440 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.42■□□□□ 0.7
PRNP-201ENST00000379440 NKTRP30414 1462 aaKnown RBP19.42■□□□□ 0.7
PRNP-201ENST00000379440 UBR1Q8IWV7 1749 aa19.42■□□□□ 0.7
PRNP-201ENST00000379440 WASLO00401 505 aaPredicted RBP19.41■□□□□ 0.7
PRNP-201ENST00000379440 IQSEC2Q5JU85 1478 aa19.4■□□□□ 0.7
PRNP-201ENST00000379440 LTKP29376 864 aa19.4■□□□□ 0.7
PRNP-201ENST00000379440 NCKAP5LQ9HCH0 1330 aa19.39■□□□□ 0.69
PRNP-201ENST00000379440 U2SURPO15042 1029 aaKnown RBP19.39■□□□□ 0.69
PRNP-201ENST00000379440 BCAR3O75815 825 aa19.39■□□□□ 0.69
PRNP-201ENST00000379440 FBLN1P23142 703 aa19.39■□□□□ 0.69
PRNP-201ENST00000379440 MED14O60244 1454 aa19.38■□□□□ 0.69
PRNP-201ENST00000379440 PHF23Q9BUL5 403 aaPredicted RBP19.37■□□□□ 0.69
PRNP-201ENST00000379440 ANKRD26Q9UPS8 1709 aa19.37■□□□□ 0.69
PRNP-201ENST00000379440 TRHP20396 242 aaPredicted RBP19.37■□□□□ 0.69
PRNP-201ENST00000379440 PPIP5K1Q6PFW1 1433 aa19.36■□□□□ 0.69
PRNP-201ENST00000379440 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.36■□□□□ 0.69
PRNP-201ENST00000379440 NUDT16Q96DE0 195 aaKnown RBP19.36■□□□□ 0.69
PRNP-201ENST00000379440 COL3A1P02461 1466 aaPredicted RBP19.36■□□□□ 0.69
PRNP-201ENST00000379440 ATP7BP35670 1465 aa19.36■□□□□ 0.69
PRNP-201ENST00000379440 ADAMTS13Q76LX8 1427 aa19.35■□□□□ 0.69
PRNP-201ENST00000379440 TECPR2O15040 1411 aa19.35■□□□□ 0.69
PRNP-201ENST00000379440 FAM135BQ49AJ0 1406 aa19.35■□□□□ 0.69
PRNP-201ENST00000379440 SIRT1Q96EB6 747 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms