RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 PIP4K2AP48426 406 aaPredicted RBP13.45□□□□□ -0.26
PTCHD1-201ENST00000379361 NUP155O75694 1391 aa13.45□□□□□ -0.26
PTCHD1-201ENST00000379361 STIM1Q13586 685 aa13.45□□□□□ -0.26
PTCHD1-201ENST00000379361 NLRP13Q86W25 1043 aa13.45□□□□□ -0.26
PTCHD1-201ENST00000379361 EIF2S2P20042 333 aaKnown RBP13.45□□□□□ -0.26
PTCHD1-201ENST00000379361 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.45□□□□□ -0.26
PTCHD1-201ENST00000379361 TMEM87AQ8NBN3 555 aa13.45□□□□□ -0.26
PTCHD1-201ENST00000379361 NUTM2DQ5VT03 806 aaPredicted RBP13.44□□□□□ -0.26
PTCHD1-201ENST00000379361 MICAL3Q7RTP6 2002 aa13.44□□□□□ -0.26
PTCHD1-201ENST00000379361 AK9Q5TCS8 1911 aa13.44□□□□□ -0.26
PTCHD1-201ENST00000379361 ZKSCAN2Q63HK3 967 aa13.44□□□□□ -0.26
PTCHD1-201ENST00000379361 KIF15Q9NS87 1388 aa13.44□□□□□ -0.26
PTCHD1-201ENST00000379361 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.44□□□□□ -0.26
PTCHD1-201ENST00000379361 CLASRPQ8N2M8 674 aaKnown RBP13.44□□□□□ -0.26
PTCHD1-201ENST00000379361 KRT18P05783 430 aaKnown RBP13.44□□□□□ -0.26
PTCHD1-201ENST00000379361 RABEP1Q15276 862 aa13.44□□□□□ -0.26
PTCHD1-201ENST00000379361 NUTM2FA1L443 756 aa13.44□□□□□ -0.26
PTCHD1-201ENST00000379361 KIF6Q6ZMV9 814 aa13.44□□□□□ -0.26
PTCHD1-201ENST00000379361 TNIKQ9UKE5 1360 aa13.44□□□□□ -0.26
PTCHD1-201ENST00000379361 ZNHIT6Q9NWK9 470 aaKnown RBP13.44□□□□□ -0.26
PTCHD1-201ENST00000379361 CLUAP1Q96AJ1 413 aa13.43□□□□□ -0.26
PTCHD1-201ENST00000379361 KIF3BO15066 747 aa13.43□□□□□ -0.26
PTCHD1-201ENST00000379361 IFT57Q9NWB7 429 aa13.43□□□□□ -0.26
PTCHD1-201ENST00000379361 CCDC18Q5T9S5 1454 aa13.43□□□□□ -0.26
PTCHD1-201ENST00000379361 SPDYE4A6NLX3 237 aa13.43□□□□□ -0.26
PTCHD1-201ENST00000379361 RBM19Q9Y4C8 960 aaKnown RBP13.43□□□□□ -0.26
PTCHD1-201ENST00000379361 MATR3P43243 847 aaKnown RBP eCLIP13.43□□□□□ -0.26
PTCHD1-201ENST00000379361 RSPH4AQ5TD94 716 aa13.43□□□□□ -0.26
PTCHD1-201ENST00000379361 MPHOSPH10O00566 681 aaKnown RBP13.43□□□□□ -0.26
PTCHD1-201ENST00000379361 MYO15BQ96JP2 1530 aa13.42□□□□□ -0.26
PTCHD1-201ENST00000379361 HSPA5P11021 654 aaKnown RBP13.42□□□□□ -0.26
PTCHD1-201ENST00000379361 ANKRD62A6NC57 917 aa13.42□□□□□ -0.26
PTCHD1-201ENST00000379361 HMGN5P82970 282 aaKnown RBP13.42□□□□□ -0.26
PTCHD1-201ENST00000379361 ERC1Q8IUD2 1116 aa13.42□□□□□ -0.26
PTCHD1-201ENST00000379361 CARMIL1Q5VZK9 1371 aa13.41□□□□□ -0.26
PTCHD1-201ENST00000379361 SMC3Q9UQE7 1217 aa13.41□□□□□ -0.26
PTCHD1-201ENST00000379361 RIC3Q7Z5B4 369 aa13.41□□□□□ -0.26
PTCHD1-201ENST00000379361 CCDC112Q8NEF3 446 aa13.41□□□□□ -0.26
PTCHD1-201ENST00000379361 PDCL3Q9H2J4 239 aa13.41□□□□□ -0.26
PTCHD1-201ENST00000379361 INTS3Q68E01 1043 aaKnown RBP13.41□□□□□ -0.26
PTCHD1-201ENST00000379361 WASHC4Q2M389 1173 aa13.41□□□□□ -0.26
PTCHD1-201ENST00000379361 FILIP1LQ4L180 1135 aa13.4□□□□□ -0.26
PTCHD1-201ENST00000379361 FOSBP53539 338 aa13.4□□□□□ -0.26
PTCHD1-201ENST00000379361 VPS37CA5D8V6 355 aaPredicted RBP13.4□□□□□ -0.26
PTCHD1-201ENST00000379361 DHX8Q14562 1220 aaKnown RBP13.4□□□□□ -0.26
PTCHD1-201ENST00000379361 TSPYL1Q9H0U9 437 aa13.4□□□□□ -0.26
PTCHD1-201ENST00000379361 MYH10P35580 1976 aa13.4□□□□□ -0.26
PTCHD1-201ENST00000379361 POTEJP0CG39 1038 aa13.4□□□□□ -0.26
PTCHD1-201ENST00000379361 PDILTQ8N807 584 aa13.4□□□□□ -0.26
PTCHD1-201ENST00000379361 IPO9Q96P70 1041 aaKnown RBP13.4□□□□□ -0.26
PTCHD1-201ENST00000379361 IQCEQ6IPM2 695 aa13.39□□□□□ -0.27
PTCHD1-201ENST00000379361 RAPGEF4Q8WZA2 1011 aa13.39□□□□□ -0.27
PTCHD1-201ENST00000379361 CNTROBQ8N137 903 aa13.39□□□□□ -0.27
PTCHD1-201ENST00000379361 CUX2O14529 1486 aa13.39□□□□□ -0.27
PTCHD1-201ENST00000379361 DEF6Q9H4E7 631 aa13.39□□□□□ -0.27
PTCHD1-201ENST00000379361 STK11IPQ8N1F8 1099 aa13.39□□□□□ -0.27
PTCHD1-201ENST00000379361 CENPQQ7L2Z9 268 aaPredicted RBP13.39□□□□□ -0.27
PTCHD1-201ENST00000379361 HIP1O00291 1037 aa13.38□□□□□ -0.27
PTCHD1-201ENST00000379361 STAMBPO95630 424 aa13.38□□□□□ -0.27
PTCHD1-201ENST00000379361 NUCB2P80303 420 aa13.38□□□□□ -0.27
PTCHD1-201ENST00000379361 HOMER2Q9NSB8 354 aa13.38□□□□□ -0.27
PTCHD1-201ENST00000379361 PSMA5P28066 241 aa13.38□□□□□ -0.27
PTCHD1-201ENST00000379361 LEKR1Q6ZMV7 388 aa13.38□□□□□ -0.27
PTCHD1-201ENST00000379361 CCDC91Q7Z6B0 441 aa13.38□□□□□ -0.27
PTCHD1-201ENST00000379361 MTMR7Q9Y216 660 aa13.38□□□□□ -0.27
PTCHD1-201ENST00000379361 EPB41L2O43491 1005 aaKnown RBP13.37□□□□□ -0.27
PTCHD1-201ENST00000379361 DDX19BQ9UMR2 479 aa13.37□□□□□ -0.27
PTCHD1-201ENST00000379361 BAZ1AQ9NRL2 1556 aaPredicted RBP13.37□□□□□ -0.27
PTCHD1-201ENST00000379361 MIA2Q96PC5 1412 aa13.37□□□□□ -0.27
PTCHD1-201ENST00000379361 PDS5BQ9NTI5 1447 aa13.37□□□□□ -0.27
PTCHD1-201ENST00000379361 VGFO15240 615 aaPredicted RBP13.37□□□□□ -0.27
PTCHD1-201ENST00000379361 API5Q9BZZ5 524 aaKnown RBP13.37□□□□□ -0.27
PTCHD1-201ENST00000379361 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.37□□□□□ -0.27
PTCHD1-201ENST00000379361 CT47B1P0C2W7 299 aaPredicted RBP13.37□□□□□ -0.27
PTCHD1-201ENST00000379361 ANAPC15P60006 121 aa13.37□□□□□ -0.27
PTCHD1-201ENST00000379361 CCDC144AA2RUR9 1427 aa13.37□□□□□ -0.27
PTCHD1-201ENST00000379361 ATP2B2Q01814 1243 aa13.37□□□□□ -0.27
PTCHD1-201ENST00000379361 KIAA0754O94854 1291 aa13.36□□□□□ -0.27
PTCHD1-201ENST00000379361 SMG6Q86US8 1419 aaKnown RBP13.36□□□□□ -0.27
PTCHD1-201ENST00000379361 FKBP5Q13451 457 aaPredicted RBP13.36□□□□□ -0.27
PTCHD1-201ENST00000379361 SLC4A3P48751 1232 aa13.36□□□□□ -0.27
PTCHD1-201ENST00000379361 SMC2O95347 1197 aa13.36□□□□□ -0.27
PTCHD1-201ENST00000379361 TNIP1Q15025 636 aa13.36□□□□□ -0.27
PTCHD1-201ENST00000379361 MTERF4Q7Z6M4 381 aaKnown RBP13.35□□□□□ -0.27
PTCHD1-201ENST00000379361 PPM1EQ8WY54 764 aa13.35□□□□□ -0.27
PTCHD1-201ENST00000379361 ZNF396Q96N95 335 aaPredicted RBP13.35□□□□□ -0.27
PTCHD1-201ENST00000379361 E9PSI1 815 aa13.35□□□□□ -0.27
PTCHD1-201ENST00000379361 SDF4Q9BRK5 362 aa13.35□□□□□ -0.27
PTCHD1-201ENST00000379361 TTLL5Q6EMB2 1281 aa13.35□□□□□ -0.27
PTCHD1-201ENST00000379361 PLCD4Q9BRC7 762 aa13.35□□□□□ -0.27
PTCHD1-201ENST00000379361 KINO60870 393 aaKnown RBP13.35□□□□□ -0.27
PTCHD1-201ENST00000379361 DRC1Q96MC2 740 aa13.35□□□□□ -0.27
PTCHD1-201ENST00000379361 BMP2KQ9NSY1 1161 aaPredicted RBP13.34□□□□□ -0.27
PTCHD1-201ENST00000379361 NEUROD6Q96NK8 337 aa13.34□□□□□ -0.27
PTCHD1-201ENST00000379361 CCDC181Q5TID7 509 aa13.34□□□□□ -0.27
PTCHD1-201ENST00000379361 SLC26A8Q96RN1 970 aa13.34□□□□□ -0.27
PTCHD1-201ENST00000379361 DYDC1Q8WWB3 177 aa13.34□□□□□ -0.27
PTCHD1-201ENST00000379361 PPP4R3AQ6IN85 833 aa13.34□□□□□ -0.27
PTCHD1-201ENST00000379361 TRAK1Q9UPV9 953 aa13.34□□□□□ -0.27
PTCHD1-201ENST00000379361 RBM5P52756 815 aaKnown RBP eCLIP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms