RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 ADCY10Q96PN6 1610 aa8.61□□□□□ -1.03
CDKAL1-202ENST00000378610 CARNS1A5YM72 827 aa8.61□□□□□ -1.03
CDKAL1-202ENST00000378610 PATL2C9JE40 543 aaKnown RBP8.61□□□□□ -1.03
CDKAL1-202ENST00000378610 CENPQQ7L2Z9 268 aaPredicted RBP8.61□□□□□ -1.03
CDKAL1-202ENST00000378610 SPATA32Q96LK8 384 aa8.61□□□□□ -1.03
CDKAL1-202ENST00000378610 NUBP1P53384 320 aa8.61□□□□□ -1.03
CDKAL1-202ENST00000378610 DCAF8Q5TAQ9 597 aa8.61□□□□□ -1.03
CDKAL1-202ENST00000378610 EPRSP07814 1512 aaKnown RBP8.61□□□□□ -1.03
CDKAL1-202ENST00000378610 ZNF526Q8TF50 670 aaPredicted RBP8.6□□□□□ -1.03
CDKAL1-202ENST00000378610 SCAPERQ9BY12 1400 aa8.6□□□□□ -1.03
CDKAL1-202ENST00000378610 KIAA1522Q9P206 1035 aaPredicted RBP8.6□□□□□ -1.03
CDKAL1-202ENST00000378610 ABCC5O15440 1437 aa8.6□□□□□ -1.03
CDKAL1-202ENST00000378610 IVNS1ABPQ9Y6Y0 642 aa8.6□□□□□ -1.03
CDKAL1-202ENST00000378610 IQGAP2Q13576 1575 aa8.59□□□□□ -1.03
CDKAL1-202ENST00000378610 ABCC2Q92887 1545 aa8.59□□□□□ -1.03
CDKAL1-202ENST00000378610 SND1Q7KZF4 910 aaKnown RBP eCLIP8.59□□□□□ -1.03
CDKAL1-202ENST00000378610 KIAA1107Q9UPP5 1409 aa8.59□□□□□ -1.03
CDKAL1-202ENST00000378610 ABCC10Q5T3U5 1492 aa8.58□□□□□ -1.04
CDKAL1-202ENST00000378610 EIF4G3O43432 1585 aaKnown RBP8.58□□□□□ -1.04
CDKAL1-202ENST00000378610 EIF3AQ14152 1382 aaKnown RBP8.58□□□□□ -1.04
CDKAL1-202ENST00000378610 POGKQ9P215 609 aa8.58□□□□□ -1.04
CDKAL1-202ENST00000378610 CLSTN1O94985 981 aa8.58□□□□□ -1.04
CDKAL1-202ENST00000378610 HSP90AA2PQ14568 343 aaPredicted RBP8.58□□□□□ -1.04
CDKAL1-202ENST00000378610 CRBNQ96SW2 442 aa8.58□□□□□ -1.04
CDKAL1-202ENST00000378610 PRDM16Q9HAZ2 1276 aa8.58□□□□□ -1.04
CDKAL1-202ENST00000378610 PRDM15P57071 1507 aaPredicted RBP8.58□□□□□ -1.04
CDKAL1-202ENST00000378610 KIAA0586Q9BVV6 1533 aa8.58□□□□□ -1.04
CDKAL1-202ENST00000378610 ZNF521Q96K83 1311 aa8.57□□□□□ -1.04
CDKAL1-202ENST00000378610 RNF17Q9BXT8 1623 aaKnown RBP8.57□□□□□ -1.04
CDKAL1-202ENST00000378610 CANXP27824 592 aaKnown RBP8.57□□□□□ -1.04
CDKAL1-202ENST00000378610 SLC4A3P48751 1232 aa8.57□□□□□ -1.04
CDKAL1-202ENST00000378610 PRDM4Q9UKN5 801 aa8.57□□□□□ -1.04
CDKAL1-202ENST00000378610 PDS5BQ9NTI5 1447 aa8.57□□□□□ -1.04
CDKAL1-202ENST00000378610 XRCC6P12956 609 aaKnown RBP eCLIP8.56□□□□□ -1.04
CDKAL1-202ENST00000378610 COL17A1Q9UMD9 1497 aaPredicted RBP8.56□□□□□ -1.04
CDKAL1-202ENST00000378610 CALD1Q05682 793 aaKnown RBP8.56□□□□□ -1.04
CDKAL1-202ENST00000378610 PCMTD1Q96MG8 357 aaPredicted RBP8.56□□□□□ -1.04
CDKAL1-202ENST00000378610 SKAP1Q86WV1 359 aa8.55□□□□□ -1.04
CDKAL1-202ENST00000378610 TMC1Q8TDI8 760 aa8.55□□□□□ -1.04
CDKAL1-202ENST00000378610 RTEL1-TNFRSF6BF6WH68 1400 aa8.55□□□□□ -1.04
CDKAL1-202ENST00000378610 HSP90AA1P07900 732 aaKnown RBP8.55□□□□□ -1.04
CDKAL1-202ENST00000378610 COG6Q9Y2V7 657 aa8.55□□□□□ -1.04
CDKAL1-202ENST00000378610 ZNF330Q9Y3S2 320 aaPredicted RBP8.55□□□□□ -1.04
CDKAL1-202ENST00000378610 MYO5CQ9NQX4 1742 aa8.55□□□□□ -1.04
CDKAL1-202ENST00000378610 RBM47A0AV96 593 aaKnown RBP8.54□□□□□ -1.04
CDKAL1-202ENST00000378610 PER1O15534 1290 aaPredicted RBP8.54□□□□□ -1.04
CDKAL1-202ENST00000378610 NLRP13Q86W25 1043 aa8.54□□□□□ -1.04
CDKAL1-202ENST00000378610 NCOA3Q9Y6Q9 1424 aa8.54□□□□□ -1.04
CDKAL1-202ENST00000378610 ANKRD13AQ8IZ07 590 aa8.54□□□□□ -1.04
CDKAL1-202ENST00000378610 ISY1Q9ULR0 285 aaKnown RBP8.54□□□□□ -1.04
CDKAL1-202ENST00000378610 MRRFQ96E11 262 aaKnown RBP8.54□□□□□ -1.04
CDKAL1-202ENST00000378610 PDCL3Q9H2J4 239 aa8.54□□□□□ -1.04
CDKAL1-202ENST00000378610 RRP7BPQ9NSQ0 103 aa8.54□□□□□ -1.04
CDKAL1-202ENST00000378610 PTPRGP23470 1445 aa8.53□□□□□ -1.04
CDKAL1-202ENST00000378610 ARHGAP31Q2M1Z3 1444 aa8.53□□□□□ -1.04
CDKAL1-202ENST00000378610 CDC42BPAQ5VT25 1732 aa8.53□□□□□ -1.04
CDKAL1-202ENST00000378610 KIAA0556O60303 1618 aa8.53□□□□□ -1.04
CDKAL1-202ENST00000378610 CAMSAP2Q08AD1 1489 aa8.53□□□□□ -1.04
CDKAL1-202ENST00000378610 GPRASP1Q5JY77 1395 aa8.53□□□□□ -1.04
CDKAL1-202ENST00000378610 TRMT2AQ8IZ69 625 aaKnown RBP8.53□□□□□ -1.04
CDKAL1-202ENST00000378610 GPR37O15354 613 aa8.53□□□□□ -1.04
CDKAL1-202ENST00000378610 TPM2P07951 284 aa8.53□□□□□ -1.04
CDKAL1-202ENST00000378610 CCDC102AQ96A19 550 aa8.53□□□□□ -1.04
CDKAL1-202ENST00000378610 TERF1P54274 439 aa8.52□□□□□ -1.05
CDKAL1-202ENST00000378610 CDCA7LQ96GN5 454 aa8.52□□□□□ -1.05
CDKAL1-202ENST00000378610 PNNQ9H307 717 aaKnown RBP8.52□□□□□ -1.05
CDKAL1-202ENST00000378610 PPP1R37O75864 691 aa8.52□□□□□ -1.05
CDKAL1-202ENST00000378610 AMHR2Q16671 573 aa8.52□□□□□ -1.05
CDKAL1-202ENST00000378610 C20orf194Q5TEA3 1177 aa8.52□□□□□ -1.05
CDKAL1-202ENST00000378610 MYOM1P52179 1685 aa8.52□□□□□ -1.05
CDKAL1-202ENST00000378610 RAPGEF6Q8TEU7 1601 aa8.51□□□□□ -1.05
CDKAL1-202ENST00000378610 ERBB4Q15303 1308 aa8.51□□□□□ -1.05
CDKAL1-202ENST00000378610 CDK13Q14004 1512 aaKnown RBP8.51□□□□□ -1.05
CDKAL1-202ENST00000378610 DRC1Q96MC2 740 aa8.51□□□□□ -1.05
CDKAL1-202ENST00000378610 SHANK2Q9UPX8 1470 aa8.51□□□□□ -1.05
CDKAL1-202ENST00000378610 EIF2AK4Q9P2K8 1649 aaKnown RBP8.51□□□□□ -1.05
CDKAL1-202ENST00000378610 SIRT1Q96EB6 747 aa8.5□□□□□ -1.05
CDKAL1-202ENST00000378610 IQGAP1P46940 1657 aa8.5□□□□□ -1.05
CDKAL1-202ENST00000378610 PLIN1O60240 522 aa8.5□□□□□ -1.05
CDKAL1-202ENST00000378610 SKIV2LQ15477 1246 aaKnown RBP8.5□□□□□ -1.05
CDKAL1-202ENST00000378610 DUSP27Q5VZP5 1158 aa8.5□□□□□ -1.05
CDKAL1-202ENST00000378610 NCKAP5LQ9HCH0 1330 aa8.5□□□□□ -1.05
CDKAL1-202ENST00000378610 DDIT3P35638 169 aa8.49□□□□□ -1.05
CDKAL1-202ENST00000378610 MRE11P49959 708 aa8.49□□□□□ -1.05
CDKAL1-202ENST00000378610 NOL8Q76FK4 1167 aaKnown RBP8.49□□□□□ -1.05
CDKAL1-202ENST00000378610 MFRPQ9BY79 579 aa8.49□□□□□ -1.05
CDKAL1-202ENST00000378610 NINLQ9Y2I6 1382 aa8.49□□□□□ -1.05
CDKAL1-202ENST00000378610 TXNDC2Q86VQ3 553 aa8.49□□□□□ -1.05
CDKAL1-202ENST00000378610 PLEKHH1Q9ULM0 1364 aa8.49□□□□□ -1.05
CDKAL1-202ENST00000378610 SYNMO15061 1565 aa8.49□□□□□ -1.05
CDKAL1-202ENST00000378610 GOLGA6L3A6NEY3 463 aa8.48□□□□□ -1.05
CDKAL1-202ENST00000378610 SREK1Q8WXA9 508 aaKnown RBP8.48□□□□□ -1.05
CDKAL1-202ENST00000378610 PRAG1Q86YV5 1406 aa8.48□□□□□ -1.05
CDKAL1-202ENST00000378610 ANKRD62A6NC57 917 aa8.47□□□□□ -1.05
CDKAL1-202ENST00000378610 CHRM1P11229 460 aaPredicted RBP8.47□□□□□ -1.05
CDKAL1-202ENST00000378610 PANK2Q9BZ23 570 aa8.47□□□□□ -1.05
CDKAL1-202ENST00000378610 IFT140Q96RY7 1462 aa8.47□□□□□ -1.05
CDKAL1-202ENST00000378610 MRC2Q9UBG0 1479 aa8.47□□□□□ -1.05
CDKAL1-202ENST00000378610 ESPNB1AK53 854 aa8.47□□□□□ -1.05
CDKAL1-202ENST00000378610 TBC1D32Q96NH3 1257 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms